RNA–Protein interactions for RNA: ENST00000597347.5

SOX2-OT-226, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 1,342 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-226ENST00000597347 COL13A1Q5TAT6 717 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-226ENST00000597347 METTL16Q86W50 562 aaKnown RBP11.9□□□□□ -0.5
SOX2-OT-226ENST00000597347 CCDC8Q9H0W5 538 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-226ENST00000597347 DHX36Q9H2U1 1008 aaKnown RBP11.9□□□□□ -0.5
SOX2-OT-226ENST00000597347 ZCCHC17Q9NP64 241 aaKnown RBP11.9□□□□□ -0.5
SOX2-OT-226ENST00000597347 ATRNL1Q5VV63 1379 aa11.9□□□□□ -0.5
SOX2-OT-226ENST00000597347 ZAP70P43403 619 aa11.89□□□□□ -0.51
SOX2-OT-226ENST00000597347 LBX1P52954 281 aa11.89□□□□□ -0.51
SOX2-OT-226ENST00000597347 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
SOX2-OT-226ENST00000597347 TBC1D9Q6ZT07 1266 aa11.89□□□□□ -0.51
SOX2-OT-226ENST00000597347 AACSQ86V21 672 aa11.89□□□□□ -0.51
SOX2-OT-226ENST00000597347 TICAM2Q86XR7 235 aa11.89□□□□□ -0.51
SOX2-OT-226ENST00000597347 ERO1BQ86YB8 467 aa11.89□□□□□ -0.51
SOX2-OT-226ENST00000597347 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
SOX2-OT-226ENST00000597347 ZNF341Q9BYN7 854 aa11.89□□□□□ -0.51
SOX2-OT-226ENST00000597347 LRRCC1Q9C099 1032 aa11.89□□□□□ -0.51
SOX2-OT-226ENST00000597347 SPDYE5A6NIY4 337 aa11.88□□□□□ -0.51
SOX2-OT-226ENST00000597347 IFIT2P09913 472 aaKnown RBP11.88□□□□□ -0.51
SOX2-OT-226ENST00000597347 BTDP43251 543 aa11.88□□□□□ -0.51
SOX2-OT-226ENST00000597347 PPATQ06203 517 aa11.88□□□□□ -0.51
SOX2-OT-226ENST00000597347 NFIAQ12857 509 aa11.88□□□□□ -0.51
SOX2-OT-226ENST00000597347 OTUD7BQ6GQQ9 843 aa11.88□□□□□ -0.51
SOX2-OT-226ENST00000597347 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
SOX2-OT-226ENST00000597347 MS4A4AQ96JQ5 239 aa11.88□□□□□ -0.51
SOX2-OT-226ENST00000597347 RAI14Q9P0K7 980 aa11.88□□□□□ -0.51
SOX2-OT-226ENST00000597347 CSADQ9Y600 493 aa11.88□□□□□ -0.51
SOX2-OT-226ENST00000597347 PHF20L1A8MW92 1017 aa11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 RGS3P49796 1198 aa11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 GTF2A2P52657 109 aa11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 CACNB3P54284 484 aa11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 MAP3K12Q12852 859 aa11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 HDAC1Q13547 482 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 NAA16Q6N069 864 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 FOXP4Q8IVH2 680 aaPredicted RBP11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 GINM1Q9NU53 330 aa11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 TLR7Q9NYK1 1049 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-226ENST00000597347 CXCL11O14625 94 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 CTNND1O60716 968 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 GRM1Q13255 1194 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 VGLL4Q14135 290 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 SH3BP5LQ7L8J4 393 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 IFNL1Q8IU54 200 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 CDAN1Q8IWY9 1227 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 CLMNQ96JQ2 1002 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 HAUS7Q99871 368 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 IL1RAPL2Q9NP60 686 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 PIH1D3Q9NQM4 214 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 SNRKQ9NRH2 765 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 PI4KBQ9UBF8 816 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 HERC5Q9UII4 1024 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 TRPA1O75762 1119 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 GJA5P36382 358 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 PPIL2Q13356 520 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 PRKG1Q13976 671 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 PKN2Q16513 984 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 ZFPM1Q8IX07 1006 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 OPTNQ96CV9 577 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 OSBPL5Q9H0X9 879 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 DDX4Q9NQI0 724 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 KCNH4Q9UQ05 1017 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 SNCAIPQ9Y6H5 919 aa11.86□□□□□ -0.51
SOX2-OT-226ENST00000597347 AKAP11Q9UKA4 1901 aa11.85□□□□□ -0.51
SOX2-OT-226ENST00000597347 DDTLA6NHG4 134 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-226ENST00000597347 CETPP11597 493 aa11.85□□□□□ -0.51
SOX2-OT-226ENST00000597347 TCP10Q12799 353 aa11.85□□□□□ -0.51
SOX2-OT-226ENST00000597347 GCC1Q96CN9 775 aa11.85□□□□□ -0.51
SOX2-OT-226ENST00000597347 WRNIP1Q96S55 665 aa11.85□□□□□ -0.51
SOX2-OT-226ENST00000597347 ECHDC1Q9NTX5 307 aa11.85□□□□□ -0.51
SOX2-OT-226ENST00000597347 LAMB1P07942 1786 aa11.84□□□□□ -0.51
SOX2-OT-226ENST00000597347 SNAPC2Q13487 334 aa11.84□□□□□ -0.51
SOX2-OT-226ENST00000597347 UBE3CQ15386 1083 aa11.84□□□□□ -0.51
SOX2-OT-226ENST00000597347 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
SOX2-OT-226ENST00000597347 PTPN18Q99952 460 aa11.84□□□□□ -0.51
SOX2-OT-226ENST00000597347 RIOK1Q9BRS2 568 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-226ENST00000597347 FZD1Q9UP38 647 aa11.84□□□□□ -0.51
SOX2-OT-226ENST00000597347 MYH13Q9UKX3 1938 aa11.84□□□□□ -0.51
SOX2-OT-226ENST00000597347 TTC41PQ6P2S7 1318 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 TCRBV5S4A2TA0A5A2 114 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 GPR25O00155 361 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 CYP7A1P22680 504 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 MIGA2Q7L4E1 593 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 TEX11Q8IYF3 940 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 SCYL3Q8IZE3 742 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 ZKSCAN4Q969J2 545 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 EHD4Q9H223 541 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 ANTXR1Q9H6X2 564 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 ELP3Q9H9T3 547 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 SLC45A1Q9Y2W3 748 aa11.83□□□□□ -0.52
SOX2-OT-226ENST00000597347 IGF2BP3O00425 579 aaKnown RBP eCLIP11.82□□□□□ -0.52
SOX2-OT-226ENST00000597347 IRF6O14896 467 aa11.82□□□□□ -0.52
SOX2-OT-226ENST00000597347 PTPRAP18433 802 aa11.82□□□□□ -0.52
SOX2-OT-226ENST00000597347 INPP5BP32019 993 aa11.82□□□□□ -0.52
SOX2-OT-226ENST00000597347 SLC9C2Q5TAH2 1124 aa11.82□□□□□ -0.52
SOX2-OT-226ENST00000597347 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms