RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 NBPF3Q9H094 633 aa19.57■□□□□ 0.72
LIG1-214ENST00000597146 C11orf49Q9H6J7 331 aa19.57■□□□□ 0.72
LIG1-214ENST00000597146 COL2A1P02458 1487 aaPredicted RBP19.56■□□□□ 0.72
LIG1-214ENST00000597146 HHIPL2Q6UWX4 724 aa19.56■□□□□ 0.72
LIG1-214ENST00000597146 ANKRD13CQ8N6S4 541 aa19.56■□□□□ 0.72
LIG1-214ENST00000597146 MRIQ9BWK5 157 aa19.56■□□□□ 0.72
LIG1-214ENST00000597146 ZHX2Q9Y6X8 837 aa19.56■□□□□ 0.72
LIG1-214ENST00000597146 LOC285556D6RIA3 1793 aa19.56■□□□□ 0.72
LIG1-214ENST00000597146 ATRNL1Q5VV63 1379 aa19.56■□□□□ 0.72
LIG1-214ENST00000597146 FRMPD3Q5JV73 1810 aa19.55■□□□□ 0.72
LIG1-214ENST00000597146 DNAH12Q6ZR08 3092 aa19.55■□□□□ 0.72
LIG1-214ENST00000597146 GRM8O00222 908 aa19.55■□□□□ 0.72
LIG1-214ENST00000597146 HMGCRP04035 888 aa19.55■□□□□ 0.72
LIG1-214ENST00000597146 FASTKD5Q7L8L6 764 aaKnown RBP19.55■□□□□ 0.72
LIG1-214ENST00000597146 COA7Q96BR5 231 aa19.55■□□□□ 0.72
LIG1-214ENST00000597146 PFASO15067 1338 aa19.54■□□□□ 0.72
LIG1-214ENST00000597146 MROH5Q6ZUA9 1318 aa19.54■□□□□ 0.72
LIG1-214ENST00000597146 ANP32CO43423 234 aa19.54■□□□□ 0.72
LIG1-214ENST00000597146 CAVIN4Q5BKX8 364 aa19.54■□□□□ 0.72
LIG1-214ENST00000597146 CDC42EP5Q6NZY7 148 aa19.54■□□□□ 0.72
LIG1-214ENST00000597146 SCYL3Q8IZE3 742 aa19.54■□□□□ 0.72
LIG1-214ENST00000597146 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.54■□□□□ 0.72
LIG1-214ENST00000597146 FAM198AQ9UFP1 575 aa19.54■□□□□ 0.72
LIG1-214ENST00000597146 DAGLAQ9Y4D2 1042 aa19.54■□□□□ 0.72
LIG1-214ENST00000597146 CDH23Q9H251 3354 aa19.54■□□□□ 0.72
LIG1-214ENST00000597146 MAST2Q6P0Q8 1798 aa19.54■□□□□ 0.72
LIG1-214ENST00000597146 ATAD5Q96QE3 1844 aa19.53■□□□□ 0.72
LIG1-214ENST00000597146 PTPRAP18433 802 aa19.53■□□□□ 0.72
LIG1-214ENST00000597146 DIXDC1Q155Q3 683 aa19.53■□□□□ 0.72
LIG1-214ENST00000597146 ZFPM1Q8IX07 1006 aa19.53■□□□□ 0.72
LIG1-214ENST00000597146 PRDM6Q9NQX0 595 aa19.53■□□□□ 0.72
LIG1-214ENST00000597146 SLC45A1Q9Y2W3 748 aa19.53■□□□□ 0.72
LIG1-214ENST00000597146 AFG3L2Q9Y4W6 797 aa19.53■□□□□ 0.72
LIG1-214ENST00000597146 MYH2Q9UKX2 1941 aa19.53■□□□□ 0.72
LIG1-214ENST00000597146 PHF20L1A8MW92 1017 aa19.52■□□□□ 0.72
LIG1-214ENST00000597146 SLURP2P0DP57 97 aa19.52■□□□□ 0.72
LIG1-214ENST00000597146 MDM2Q00987 491 aaPredicted RBP19.52■□□□□ 0.72
LIG1-214ENST00000597146 LRRC24Q50LG9 513 aa19.52■□□□□ 0.72
LIG1-214ENST00000597146 CCDC84Q86UT8 332 aaPredicted RBP19.52■□□□□ 0.72
LIG1-214ENST00000597146 SUCLG2Q96I99 432 aa19.52■□□□□ 0.72
LIG1-214ENST00000597146 SPINK5Q9NQ38 1064 aaPredicted RBP19.52■□□□□ 0.72
LIG1-214ENST00000597146 PICK1Q9NRD5 415 aa19.52■□□□□ 0.72
LIG1-214ENST00000597146 SUGT1Q9Y2Z0 365 aa19.52■□□□□ 0.72
LIG1-214ENST00000597146 POTEB2H3BUK9 544 aa19.51■□□□□ 0.71
LIG1-214ENST00000597146 METTL24Q5JXM2 366 aa19.51■□□□□ 0.71
LIG1-214ENST00000597146 VGLL2Q8N8G2 317 aa19.51■□□□□ 0.71
LIG1-214ENST00000597146 KAZALD1Q96I82 304 aa19.51■□□□□ 0.71
LIG1-214ENST00000597146 HMX1Q9NP08 348 aaPredicted RBP19.51■□□□□ 0.71
LIG1-214ENST00000597146 LTBP2Q14767 1821 aa19.51■□□□□ 0.71
LIG1-214ENST00000597146 TRIM75PA6NK02 468 aa19.5■□□□□ 0.71
LIG1-214ENST00000597146 FAM110CQ1W6H9 321 aa19.5■□□□□ 0.71
LIG1-214ENST00000597146 TREML2Q5T2D2 321 aa19.5■□□□□ 0.71
LIG1-214ENST00000597146 C9orf78Q9NZ63 289 aaPredicted RBP19.5■□□□□ 0.71
LIG1-214ENST00000597146 OGDHLQ9ULD0 1010 aa19.5■□□□□ 0.71
LIG1-214ENST00000597146 MUC3AQ02505 3323 aa19.5■□□□□ 0.71
LIG1-214ENST00000597146 FAM109BQ6ICB4 259 aaPredicted RBP19.49■□□□□ 0.71
LIG1-214ENST00000597146 TRIB2Q92519 343 aa19.49■□□□□ 0.71
LIG1-214ENST00000597146 AGTPBP1Q9UPW5 1226 aa19.49■□□□□ 0.71
LIG1-214ENST00000597146 PDE8BO95263 885 aa19.48■□□□□ 0.71
LIG1-214ENST00000597146 USP40Q9NVE5 1235 aa19.48■□□□□ 0.71
LIG1-214ENST00000597146 FANCIQ9NVI1 1328 aa19.48■□□□□ 0.71
LIG1-214ENST00000597146 PRDX5P30044 214 aa19.47■□□□□ 0.71
LIG1-214ENST00000597146 LRRC26Q2I0M4 334 aa19.47■□□□□ 0.71
LIG1-214ENST00000597146 GJD2Q9UKL4 321 aa19.47■□□□□ 0.71
LIG1-214ENST00000597146 RFX7Q2KHR2 1363 aa19.46■□□□□ 0.71
LIG1-214ENST00000597146 COL6A1P12109 1028 aa19.46■□□□□ 0.71
LIG1-214ENST00000597146 RGS3P49796 1198 aa19.46■□□□□ 0.71
LIG1-214ENST00000597146 ZNF697Q5TEC3 545 aa19.46■□□□□ 0.71
LIG1-214ENST00000597146 SH3BP5LQ7L8J4 393 aa19.46■□□□□ 0.71
LIG1-214ENST00000597146 KLHDC4Q8TBB5 520 aa19.46■□□□□ 0.71
LIG1-214ENST00000597146 VAMP4O75379 141 aa19.45■□□□□ 0.7
LIG1-214ENST00000597146 PRKAR2AP13861 404 aaKnown RBP19.45■□□□□ 0.7
LIG1-214ENST00000597146 WWC1Q8IX03 1113 aa19.45■□□□□ 0.7
LIG1-214ENST00000597146 WDR66Q8TBY9 1149 aa19.45■□□□□ 0.7
LIG1-214ENST00000597146 BICC1Q9H694 974 aaKnown RBP19.45■□□□□ 0.7
LIG1-214ENST00000597146 PNMA3Q9UL41 463 aa19.45■□□□□ 0.7
LIG1-214ENST00000597146 LRRFIP2Q9Y608 721 aaKnown RBP19.45■□□□□ 0.7
LIG1-214ENST00000597146 NBPF7P0C2Y1 421 aaPredicted RBP19.44■□□□□ 0.7
LIG1-214ENST00000597146 MAP3K21Q5TCX8 1036 aa19.44■□□□□ 0.7
LIG1-214ENST00000597146 SLC4A10Q6U841 1118 aa19.44■□□□□ 0.7
LIG1-214ENST00000597146 MAFAQ8NHW3 353 aaPredicted RBP19.44■□□□□ 0.7
LIG1-214ENST00000597146 CDX2Q99626 313 aaPredicted RBP19.44■□□□□ 0.7
LIG1-214ENST00000597146 ALDH1L1O75891 902 aa19.43■□□□□ 0.7
LIG1-214ENST00000597146 IFIT1P09914 478 aaKnown RBP19.43■□□□□ 0.7
LIG1-214ENST00000597146 CYP2B6P20813 491 aa19.43■□□□□ 0.7
LIG1-214ENST00000597146 FGFR2P21802 821 aa19.43■□□□□ 0.7
LIG1-214ENST00000597146 PUM3Q15397 648 aaKnown RBP19.43■□□□□ 0.7
LIG1-214ENST00000597146 ZSCAN29Q8IWY8 852 aaPredicted RBP19.43■□□□□ 0.7
LIG1-214ENST00000597146 ANKRD44Q8N8A2 993 aa19.43■□□□□ 0.7
LIG1-214ENST00000597146 MRS2Q9HD23 443 aa19.43■□□□□ 0.7
LIG1-214ENST00000597146 KIF16BQ96L93 1317 aa19.43■□□□□ 0.7
LIG1-214ENST00000597146 DDTLA6NHG4 134 aaPredicted RBP19.42■□□□□ 0.7
LIG1-214ENST00000597146 RABL6Q3YEC7 729 aaPredicted RBP19.42■□□□□ 0.7
LIG1-214ENST00000597146 CTNND1O60716 968 aaKnown RBP19.41■□□□□ 0.7
LIG1-214ENST00000597146 ENTPD3O75355 529 aa19.41■□□□□ 0.7
LIG1-214ENST00000597146 CCDC27Q2M243 656 aa19.41■□□□□ 0.7
LIG1-214ENST00000597146 SRCIN1Q9C0H9 1055 aa19.41■□□□□ 0.7
LIG1-214ENST00000597146 FAM196BA6NMK8 535 aa19.4■□□□□ 0.7
LIG1-214ENST00000597146 PEX10O60683 326 aa19.4■□□□□ 0.7
LIG1-214ENST00000597146 LDHBP07195 334 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms