RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 COG6Q9Y2V7 657 aa16.06■□□□□ 0.16
LIG1-212ENST00000596549 GPR75-ASB3A0A0A6YYF3 556 aa16.05■□□□□ 0.16
LIG1-212ENST00000596549 ENTPD3O75355 529 aa16.05■□□□□ 0.16
LIG1-212ENST00000596549 TTC39AQ5SRH9 613 aa16.05■□□□□ 0.16
LIG1-212ENST00000596549 ERO1BQ86YB8 467 aa16.05■□□□□ 0.16
LIG1-212ENST00000596549 EAF2Q96CJ1 260 aaPredicted RBP16.05■□□□□ 0.16
LIG1-212ENST00000596549 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
LIG1-212ENST00000596549 HTTP42858 3142 aa16.05■□□□□ 0.16
LIG1-212ENST00000596549 MGAMO43451 1857 aa16.04■□□□□ 0.16
LIG1-212ENST00000596549 CCL15-CCL14A0A0B4J2E2 113 aa16.04■□□□□ 0.16
LIG1-212ENST00000596549 DDTLA6NHG4 134 aaPredicted RBP16.04■□□□□ 0.16
LIG1-212ENST00000596549 FKTNO75072 461 aa16.04■□□□□ 0.16
LIG1-212ENST00000596549 CYP2E1P05181 493 aaPredicted RBP16.04■□□□□ 0.16
LIG1-212ENST00000596549 PICALMQ13492 652 aa16.04■□□□□ 0.16
LIG1-212ENST00000596549 CCL15Q16663 113 aa16.04■□□□□ 0.16
LIG1-212ENST00000596549 SLF2Q8IX21 1173 aa16.04■□□□□ 0.16
LIG1-212ENST00000596549 FAM43AQ8N2R8 423 aa16.04■□□□□ 0.16
LIG1-212ENST00000596549 ZNF512BQ96KM6 892 aaPredicted RBP16.04■□□□□ 0.16
LIG1-212ENST00000596549 CCDC8Q9H0W5 538 aaPredicted RBP16.04■□□□□ 0.16
LIG1-212ENST00000596549 IRF6O14896 467 aa16.03■□□□□ 0.16
LIG1-212ENST00000596549 GTF2A2P52657 109 aa16.03■□□□□ 0.16
LIG1-212ENST00000596549 CAP1Q01518 475 aa16.03■□□□□ 0.16
LIG1-212ENST00000596549 PPIL2Q13356 520 aa16.03■□□□□ 0.16
LIG1-212ENST00000596549 NOL9Q5SY16 702 aaKnown RBP16.03■□□□□ 0.16
LIG1-212ENST00000596549 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
LIG1-212ENST00000596549 ADGRA1Q86SQ6 560 aa16.03■□□□□ 0.16
LIG1-212ENST00000596549 SIRT2Q8IXJ6 389 aa16.03■□□□□ 0.16
LIG1-212ENST00000596549 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
LIG1-212ENST00000596549 RAI14Q9P0K7 980 aa16.03■□□□□ 0.16
LIG1-212ENST00000596549 DDX19BQ9UMR2 479 aa16.03■□□□□ 0.16
LIG1-212ENST00000596549 PHF20L1A8MW92 1017 aa16.02■□□□□ 0.16
LIG1-212ENST00000596549 MS4A1P11836 297 aa16.02■□□□□ 0.16
LIG1-212ENST00000596549 ZAP70P43403 619 aa16.02■□□□□ 0.16
LIG1-212ENST00000596549 CCDC158Q5M9N0 1113 aa16.02■□□□□ 0.16
LIG1-212ENST00000596549 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.16
LIG1-212ENST00000596549 GSTO1P78417 241 aa16.01■□□□□ 0.15
LIG1-212ENST00000596549 PPATQ06203 517 aa16.01■□□□□ 0.15
LIG1-212ENST00000596549 LRP2BPQ9P2M1 347 aa16.01■□□□□ 0.15
LIG1-212ENST00000596549 HPS5Q9UPZ3 1129 aa16.01■□□□□ 0.15
LIG1-212ENST00000596549 NDUFB9Q9Y6M9 179 aa16.01■□□□□ 0.15
LIG1-212ENST00000596549 MAP3K10Q02779 954 aa16■□□□□ 0.15
LIG1-212ENST00000596549 TAF1CQ15572 869 aaPredicted RBP16■□□□□ 0.15
LIG1-212ENST00000596549 OTUD7BQ6GQQ9 843 aa16■□□□□ 0.15
LIG1-212ENST00000596549 ZSCAN29Q8IWY8 852 aaPredicted RBP16■□□□□ 0.15
LIG1-212ENST00000596549 GOLGA6L2Q8N9W4 650 aaPredicted RBP16■□□□□ 0.15
LIG1-212ENST00000596549 SH3RF3Q8TEJ3 882 aaPredicted RBP16■□□□□ 0.15
LIG1-212ENST00000596549 OSBPL5Q9H0X9 879 aaPredicted RBP16■□□□□ 0.15
LIG1-212ENST00000596549 IL1RAPL2Q9NP60 686 aa16■□□□□ 0.15
LIG1-212ENST00000596549 KCNH4Q9UQ05 1017 aa16■□□□□ 0.15
LIG1-212ENST00000596549 FAM196BA6NMK8 535 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 BTBD19C9JJ37 291 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
LIG1-212ENST00000596549 LDHCP07864 332 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 CETPP11597 493 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 RGS19P49795 217 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 SNAPC2Q13487 334 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 MOGSQ13724 837 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 PKN2Q16513 984 aaKnown RBP15.99■□□□□ 0.15
LIG1-212ENST00000596549 NAA16Q6N069 864 aaPredicted RBP15.99■□□□□ 0.15
LIG1-212ENST00000596549 AACSQ86V21 672 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 ERC1Q8IUD2 1116 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 SCYL3Q8IZE3 742 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 RHPN1Q8TCX5 695 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 CD99L2Q8TCZ2 262 aa15.99■□□□□ 0.15
LIG1-212ENST00000596549 AATFQ9NY61 560 aaKnown RBP eCLIP15.99■□□□□ 0.15
LIG1-212ENST00000596549 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.99■□□□□ 0.15
LIG1-212ENST00000596549 FBXO46Q6PJ61 603 aaPredicted RBP15.98■□□□□ 0.15
LIG1-212ENST00000596549 OTOP1Q7RTM1 612 aa15.98■□□□□ 0.15
LIG1-212ENST00000596549 RPAP2Q8IXW5 612 aaPredicted RBP15.98■□□□□ 0.15
LIG1-212ENST00000596549 TEX11Q8IYF3 940 aa15.98■□□□□ 0.15
LIG1-212ENST00000596549 ANTXR1Q9H6X2 564 aa15.98■□□□□ 0.15
LIG1-212ENST00000596549 MYH8P13535 1937 aa15.98■□□□□ 0.15
LIG1-212ENST00000596549 ADGRA2Q96PE1 1338 aa15.97■□□□□ 0.15
LIG1-212ENST00000596549 TNRC18O15417 2968 aaPredicted RBP15.97■□□□□ 0.15
LIG1-212ENST00000596549 MAP4K4O95819 1239 aaPredicted RBP15.97■□□□□ 0.15
LIG1-212ENST00000596549 SOX10P56693 466 aa15.97■□□□□ 0.15
LIG1-212ENST00000596549 ZCCHC17Q9NP64 241 aaKnown RBP15.97■□□□□ 0.15
LIG1-212ENST00000596549 PCDH10Q9P2E7 1040 aa15.97■□□□□ 0.15
LIG1-212ENST00000596549 TRIM17Q9Y577 477 aa15.97■□□□□ 0.15
LIG1-212ENST00000596549 FLT1P17948 1338 aa15.96■□□□□ 0.15
LIG1-212ENST00000596549 APBB1O00213 710 aa15.96■□□□□ 0.15
LIG1-212ENST00000596549 SP3Q02447 781 aa15.96■□□□□ 0.15
LIG1-212ENST00000596549 PDE3AQ14432 1141 aa15.96■□□□□ 0.15
LIG1-212ENST00000596549 HSP90AB4PQ58FF6 505 aa15.96■□□□□ 0.15
LIG1-212ENST00000596549 CCDC84Q86UT8 332 aaPredicted RBP15.96■□□□□ 0.15
LIG1-212ENST00000596549 KIF1BPQ96EK5 621 aa15.96■□□□□ 0.15
LIG1-212ENST00000596549 ERO1AQ96HE7 468 aa15.96■□□□□ 0.15
LIG1-212ENST00000596549 ZFYVE28Q9HCC9 887 aa15.96■□□□□ 0.15
LIG1-212ENST00000596549 TBC1D12O60347 775 aa15.95■□□□□ 0.14
LIG1-212ENST00000596549 TLR2O60603 784 aa15.95■□□□□ 0.14
LIG1-212ENST00000596549 PTPRAP18433 802 aa15.95■□□□□ 0.14
LIG1-212ENST00000596549 PPP4CP60510 307 aa15.95■□□□□ 0.14
LIG1-212ENST00000596549 DYNLL1P63167 89 aaKnown RBP15.95■□□□□ 0.14
LIG1-212ENST00000596549 RRP1BQ14684 758 aaKnown RBP15.95■□□□□ 0.14
LIG1-212ENST00000596549 ANKRD23Q86SG2 305 aa15.95■□□□□ 0.14
LIG1-212ENST00000596549 DNAJC18Q9H819 358 aa15.95■□□□□ 0.14
LIG1-212ENST00000596549 CENPFP49454 3210 aa15.94■□□□□ 0.14
LIG1-212ENST00000596549 BAZ2AQ9UIF9 1905 aaKnown RBP15.94■□□□□ 0.14
LIG1-212ENST00000596549 CTNND1O60716 968 aaKnown RBP15.94■□□□□ 0.14
LIG1-212ENST00000596549 IGSF3O75054 1194 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms