RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PIH1D3Q9NQM4 214 aaKnown RBP15.96■□□□□ 0.15
USE1-207ENST00000596136 SNCAIPQ9Y6H5 919 aa15.96■□□□□ 0.15
USE1-207ENST00000596136 RRP1P56182 461 aaKnown RBP15.95■□□□□ 0.14
USE1-207ENST00000596136 NAA16Q6N069 864 aaPredicted RBP15.95■□□□□ 0.14
USE1-207ENST00000596136 MIGA2Q7L4E1 593 aa15.95■□□□□ 0.14
USE1-207ENST00000596136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.95■□□□□ 0.14
USE1-207ENST00000596136 ZKSCAN4Q969J2 545 aaPredicted RBP15.95■□□□□ 0.14
USE1-207ENST00000596136 MAST2Q6P0Q8 1798 aa15.95■□□□□ 0.14
USE1-207ENST00000596136 DDTLA6NHG4 134 aaPredicted RBP15.94■□□□□ 0.14
USE1-207ENST00000596136 IGF2BP3O00425 579 aaKnown RBP eCLIP15.94■□□□□ 0.14
USE1-207ENST00000596136 NOL9Q5SY16 702 aaKnown RBP15.94■□□□□ 0.14
USE1-207ENST00000596136 ERO1BQ86YB8 467 aa15.94■□□□□ 0.14
USE1-207ENST00000596136 CNKSR2Q8WXI2 1034 aa15.94■□□□□ 0.14
USE1-207ENST00000596136 PTPN18Q99952 460 aa15.94■□□□□ 0.14
USE1-207ENST00000596136 COL2A1P02458 1487 aaPredicted RBP15.94■□□□□ 0.14
USE1-207ENST00000596136 DOCK2Q92608 1830 aa15.94■□□□□ 0.14
USE1-207ENST00000596136 PHF20L1A8MW92 1017 aa15.93■□□□□ 0.14
USE1-207ENST00000596136 TBC1D12O60347 775 aa15.93■□□□□ 0.14
USE1-207ENST00000596136 TBC1D8O95759 1140 aa15.93■□□□□ 0.14
USE1-207ENST00000596136 BAG3O95817 575 aa15.93■□□□□ 0.14
USE1-207ENST00000596136 INPP5BP32019 993 aa15.93■□□□□ 0.14
USE1-207ENST00000596136 ADGRA1Q86SQ6 560 aa15.93■□□□□ 0.14
USE1-207ENST00000596136 ANTXR1Q9H6X2 564 aa15.93■□□□□ 0.14
USE1-207ENST00000596136 DCTPP1Q9H773 170 aa15.93■□□□□ 0.14
USE1-207ENST00000596136 APBB1O00213 710 aa15.92■□□□□ 0.14
USE1-207ENST00000596136 IFIT2P09913 472 aaKnown RBP15.92■□□□□ 0.14
USE1-207ENST00000596136 PLCG2P16885 1265 aa15.92■□□□□ 0.14
USE1-207ENST00000596136 GTF2A2P52657 109 aa15.92■□□□□ 0.14
USE1-207ENST00000596136 PPATQ06203 517 aa15.92■□□□□ 0.14
USE1-207ENST00000596136 PPIL2Q13356 520 aa15.92■□□□□ 0.14
USE1-207ENST00000596136 PICALMQ13492 652 aa15.92■□□□□ 0.14
USE1-207ENST00000596136 OTUD7BQ6GQQ9 843 aa15.92■□□□□ 0.14
USE1-207ENST00000596136 OTUD5Q96G74 571 aa15.92■□□□□ 0.14
USE1-207ENST00000596136 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
USE1-207ENST00000596136 R3HDMLQ9H3Y0 253 aa15.92■□□□□ 0.14
USE1-207ENST00000596136 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.92■□□□□ 0.14
USE1-207ENST00000596136 GPR25O00155 361 aa15.91■□□□□ 0.14
USE1-207ENST00000596136 IRF6O14896 467 aa15.91■□□□□ 0.14
USE1-207ENST00000596136 TEX11Q8IYF3 940 aa15.91■□□□□ 0.14
USE1-207ENST00000596136 SH3RF3Q8TEJ3 882 aaPredicted RBP15.91■□□□□ 0.14
USE1-207ENST00000596136 BRI3BPQ8WY22 251 aa15.91■□□□□ 0.14
USE1-207ENST00000596136 NOL10Q9BSC4 688 aaKnown RBP15.91■□□□□ 0.14
USE1-207ENST00000596136 LRRCC1Q9C099 1032 aa15.91■□□□□ 0.14
USE1-207ENST00000596136 OSBPL5Q9H0X9 879 aaPredicted RBP15.91■□□□□ 0.14
USE1-207ENST00000596136 AATFQ9NY61 560 aaKnown RBP eCLIP15.91■□□□□ 0.14
USE1-207ENST00000596136 NDUFB9Q9Y6M9 179 aa15.91■□□□□ 0.14
USE1-207ENST00000596136 CDK5RAP2Q96SN8 1893 aa15.91■□□□□ 0.14
USE1-207ENST00000596136 FOCADQ5VW36 1801 aa15.9■□□□□ 0.14
USE1-207ENST00000596136 IDH1O75874 414 aaKnown RBP15.9■□□□□ 0.14
USE1-207ENST00000596136 ATP5JP18859 108 aa15.9■□□□□ 0.14
USE1-207ENST00000596136 MAP3K12Q12852 859 aa15.9■□□□□ 0.14
USE1-207ENST00000596136 TTF1Q15361 905 aaPredicted RBP15.9■□□□□ 0.14
USE1-207ENST00000596136 CERS3Q8IU89 383 aa15.9■□□□□ 0.14
USE1-207ENST00000596136 ZSCAN29Q8IWY8 852 aaPredicted RBP15.9■□□□□ 0.14
USE1-207ENST00000596136 ZNF296Q8WUU4 475 aaPredicted RBP15.9■□□□□ 0.14
USE1-207ENST00000596136 KCNH4Q9UQ05 1017 aa15.9■□□□□ 0.14
USE1-207ENST00000596136 PCDHB15Q9Y5E8 787 aa15.9■□□□□ 0.14
USE1-207ENST00000596136 CTNND1O60716 968 aaKnown RBP15.89■□□□□ 0.13
USE1-207ENST00000596136 CYP7A1P22680 504 aa15.89■□□□□ 0.13
USE1-207ENST00000596136 SNAPC2Q13487 334 aa15.89■□□□□ 0.13
USE1-207ENST00000596136 METTL16Q86W50 562 aaKnown RBP15.89■□□□□ 0.13
USE1-207ENST00000596136 ABHD8Q96I13 439 aa15.89■□□□□ 0.13
USE1-207ENST00000596136 MCOLN1Q9GZU1 580 aa15.89■□□□□ 0.13
USE1-207ENST00000596136 DHX36Q9H2U1 1008 aaKnown RBP15.89■□□□□ 0.13
USE1-207ENST00000596136 ZCCHC17Q9NP64 241 aaKnown RBP15.89■□□□□ 0.13
USE1-207ENST00000596136 CCL15-CCL14A0A0B4J2E2 113 aa15.88■□□□□ 0.13
USE1-207ENST00000596136 CETPP11597 493 aa15.88■□□□□ 0.13
USE1-207ENST00000596136 DGKZQ13574 1117 aa15.88■□□□□ 0.13
USE1-207ENST00000596136 CCL15Q16663 113 aa15.88■□□□□ 0.13
USE1-207ENST00000596136 SCYL3Q8IZE3 742 aa15.88■□□□□ 0.13
USE1-207ENST00000596136 MAGEB6Q8N7X4 407 aa15.88■□□□□ 0.13
USE1-207ENST00000596136 TGFBRAP1Q8WUH2 860 aa15.88■□□□□ 0.13
USE1-207ENST00000596136 CXCL11O14625 94 aa15.87■□□□□ 0.13
USE1-207ENST00000596136 FKTNO75072 461 aa15.87■□□□□ 0.13
USE1-207ENST00000596136 SLURP2P0DP57 97 aa15.87■□□□□ 0.13
USE1-207ENST00000596136 DYNLL1P63167 89 aaKnown RBP15.87■□□□□ 0.13
USE1-207ENST00000596136 CTU1Q7Z7A3 348 aaKnown RBP15.87■□□□□ 0.13
USE1-207ENST00000596136 HAUS7Q99871 368 aa15.87■□□□□ 0.13
USE1-207ENST00000596136 PI4KBQ9UBF8 816 aa15.87■□□□□ 0.13
USE1-207ENST00000596136 FLT1P17948 1338 aa15.87■□□□□ 0.13
USE1-207ENST00000596136 SMARCA5O60264 1052 aaPredicted RBP15.86■□□□□ 0.13
USE1-207ENST00000596136 PTPRAP18433 802 aa15.86■□□□□ 0.13
USE1-207ENST00000596136 CRHR2Q13324 411 aa15.86■□□□□ 0.13
USE1-207ENST00000596136 MOGSQ13724 837 aa15.86■□□□□ 0.13
USE1-207ENST00000596136 FAM43AQ8N2R8 423 aa15.86■□□□□ 0.13
USE1-207ENST00000596136 RIOK1Q9BRS2 568 aaKnown RBP15.86■□□□□ 0.13
USE1-207ENST00000596136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.86■□□□□ 0.13
USE1-207ENST00000596136 HERC5Q9UII4 1024 aaKnown RBP15.86■□□□□ 0.13
USE1-207ENST00000596136 SIPA1L1O43166 1804 aa15.86■□□□□ 0.13
USE1-207ENST00000596136 PHIPQ8WWQ0 1821 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 DOCK1Q14185 1865 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 TCRBV5S4A2TA0A5A2 114 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 BTBD19C9JJ37 291 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 GOLIM4O00461 696 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 PDE6AP16499 860 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 AAMPQ13685 434 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 PKN2Q16513 984 aaKnown RBP15.85■□□□□ 0.13
USE1-207ENST00000596136 SLC9C2Q5TAH2 1124 aa15.85■□□□□ 0.13
USE1-207ENST00000596136 FOXP4Q8IVH2 680 aaPredicted RBP15.85■□□□□ 0.13
USE1-207ENST00000596136 MAPKAPK5Q8IW41 473 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms