RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 ALDH1A1P00352 501 aa12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 UQCRFS1P1P0C7P4 283 aa12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 GTF2A2P52657 109 aa12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 OTUD7BQ6GQQ9 843 aa12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 AACSQ86V21 672 aa12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 NSUN4Q96CB9 384 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 AATFQ9NY61 560 aaKnown RBP eCLIP12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-210ENST00000595874 CYP2E1P05181 493 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 INHBEP58166 350 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 RHBDL3P58872 404 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 DYNLL1P63167 89 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 FKBP1CQ5VVH2 108 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 NAA16Q6N069 864 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 GADL1Q6ZQY3 521 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 OTOP1Q7RTM1 612 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 ADGRA1Q86SQ6 560 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 ERO1BQ86YB8 467 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 MAPKAPK5Q8IW41 473 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 SLF2Q8IX21 1173 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 ARHGAP39Q9C0H5 1083 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 ANTXR1Q9H6X2 564 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 SAP30BPQ9UHR5 308 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 CPA4Q9UI42 421 aa12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 RPAP1Q9BWH6 1393 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-210ENST00000595874 GPR75-ASB3A0A0A6YYF3 556 aa12.63□□□□□ -0.39
SHKBP1-210ENST00000595874 TESPA1A2RU30 521 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-210ENST00000595874 GSTO1P78417 241 aa12.63□□□□□ -0.39
SHKBP1-210ENST00000595874 MLLT1Q03111 559 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-210ENST00000595874 SNAPC2Q13487 334 aa12.63□□□□□ -0.39
SHKBP1-210ENST00000595874 MIGA1Q8NAN2 632 aa12.63□□□□□ -0.39
SHKBP1-210ENST00000595874 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
SHKBP1-210ENST00000595874 NOL10Q9BSC4 688 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-210ENST00000595874 ZFYVE28Q9HCC9 887 aa12.63□□□□□ -0.39
SHKBP1-210ENST00000595874 LAMB1P07942 1786 aa12.63□□□□□ -0.39
SHKBP1-210ENST00000595874 RFX7Q2KHR2 1363 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 ENTPD3O75355 529 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 LDHCP07864 332 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 CETPP11597 493 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 SP3Q02447 781 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 PPIL2Q13356 520 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 FBXO46Q6PJ61 603 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 TGFBRAP1Q8WUH2 860 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 IDI2Q9BXS1 227 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 GPR108Q9NPR9 543 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 NOP58Q9Y2X3 529 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 ZHX2Q9Y6X8 837 aa12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-210ENST00000595874 MAST2Q6P0Q8 1798 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 TRIM75PA6NK02 468 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 PDHXO00330 501 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 SMARCA5O60264 1052 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 CYP7A1P22680 504 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 PPATQ06203 517 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 SHROOM1Q2M3G4 852 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 SIRT2Q8IXJ6 389 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 RHPN1Q8TCX5 695 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 EDC3Q96F86 508 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 ERO1AQ96HE7 468 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 OSBPL5Q9H0X9 879 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 EFCC1Q9HA90 598 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 PICK1Q9NRD5 415 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 ZNF112Q9UJU3 913 aa12.61□□□□□ -0.39
SHKBP1-210ENST00000595874 ATRNL1Q5VV63 1379 aa12.6□□□□□ -0.39
SHKBP1-210ENST00000595874 DOCK1Q14185 1865 aa12.6□□□□□ -0.39
SHKBP1-210ENST00000595874 PHF20L1A8MW92 1017 aa12.6□□□□□ -0.39
SHKBP1-210ENST00000595874 CYP2C8P10632 490 aa12.6□□□□□ -0.39
SHKBP1-210ENST00000595874 RRP1BQ14684 758 aaKnown RBP12.6□□□□□ -0.39
SHKBP1-210ENST00000595874 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
SHKBP1-210ENST00000595874 SCYL3Q8IZE3 742 aa12.6□□□□□ -0.39
SHKBP1-210ENST00000595874 MAGEB6Q8N7X4 407 aa12.6□□□□□ -0.39
SHKBP1-210ENST00000595874 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-210ENST00000595874 CFHR5Q9BXR6 569 aa12.6□□□□□ -0.39
SHKBP1-210ENST00000595874 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
SHKBP1-210ENST00000595874 GDF11O95390 407 aa12.59□□□□□ -0.39
SHKBP1-210ENST00000595874 PTPRAP18433 802 aa12.59□□□□□ -0.39
SHKBP1-210ENST00000595874 PALD1Q9ULE6 856 aa12.59□□□□□ -0.39
SHKBP1-210ENST00000595874 DDX19BQ9UMR2 479 aa12.59□□□□□ -0.39
SHKBP1-210ENST00000595874 PTCH2Q9Y6C5 1203 aa12.59□□□□□ -0.39
SHKBP1-210ENST00000595874 ATAD5Q96QE3 1844 aa12.58□□□□□ -0.4
SHKBP1-210ENST00000595874 IFIT2P09913 472 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-210ENST00000595874 MS4A1P11836 297 aa12.58□□□□□ -0.4
SHKBP1-210ENST00000595874 MOGSQ13724 837 aa12.58□□□□□ -0.4
SHKBP1-210ENST00000595874 NOL9Q5SY16 702 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-210ENST00000595874 ERC1Q8IUD2 1116 aa12.58□□□□□ -0.4
SHKBP1-210ENST00000595874 ZBTB40Q9NUA8 1239 aa12.58□□□□□ -0.4
SHKBP1-210ENST00000595874 PTPN22Q9Y2R2 807 aa12.58□□□□□ -0.4
SHKBP1-210ENST00000595874 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
SHKBP1-210ENST00000595874 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 GOLIM4O00461 696 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 BAG3O95817 575 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 CHGBP05060 677 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 CTGFP29279 349 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 USP5P45974 858 aa12.57□□□□□ -0.4
SHKBP1-210ENST00000595874 JAG1P78504 1218 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms