RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 RPAP1Q9BWH6 1393 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-209ENST00000595803 YDJCA8MPS7 323 aa15.55■□□□□ 0.08
SHKBP1-209ENST00000595803 FGAP02671 866 aa15.55■□□□□ 0.08
SHKBP1-209ENST00000595803 DIXDC1Q155Q3 683 aa15.55■□□□□ 0.08
SHKBP1-209ENST00000595803 ALX1Q15699 326 aa15.55■□□□□ 0.08
SHKBP1-209ENST00000595803 CTU1Q7Z7A3 348 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-209ENST00000595803 KIF2CQ99661 725 aa15.55■□□□□ 0.08
SHKBP1-209ENST00000595803 RIOK1Q9BRS2 568 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-209ENST00000595803 PALD1Q9ULE6 856 aa15.55■□□□□ 0.08
SHKBP1-209ENST00000595803 HPS5Q9UPZ3 1129 aa15.55■□□□□ 0.08
SHKBP1-209ENST00000595803 MROH7-TTC4A0A0A0MT08 1334 aa15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 PRKAB2O43741 272 aa15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 RAD17O75943 681 aa15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 PPP4CP60510 307 aa15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 IMMTQ16891 758 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 CERS3Q8IU89 383 aa15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 RASEFQ8IZ41 740 aa15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 IFNL3Q8IZI9 196 aa15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 MRIQ9BWK5 157 aa15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 CRNKL1Q9BZJ0 848 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 NAPBQ9H115 298 aa15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 ADARB2Q9NS39 739 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-209ENST00000595803 MYO3BQ8WXR4 1341 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 GPR75-ASB3A0A0A6YYF3 556 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 GSG1L2A8MUP6 293 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 ZNF213O14771 459 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 VIL1P09327 827 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 PLCG2P16885 1265 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 PSMA5P28066 241 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 FXR1P51114 621 aaKnown RBP eCLIP15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 BECN1Q14457 450 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 KRT32Q14532 448 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 TNIP1Q15025 636 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 TSGA10IPQ3SY00 556 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 RSBN1LQ6PCB5 846 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 KIAA0825Q8IV33 1275 aa15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 DAXXQ9UER7 740 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-209ENST00000595803 PSMD14O00487 310 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 TRPA1O75762 1119 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 CYP21A2P08686 494 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 BTDP43251 543 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 TDO2P48775 406 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 HUNKP57058 714 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 HDLBPQ00341 1268 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 HHIPL2Q6UWX4 724 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 IL27Q8NEV9 243 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 TEKT1Q969V4 418 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 IL17RAQ96F46 866 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 GPRC5DQ9NZD1 345 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 HDAC9Q9UKV0 1011 aa15.52■□□□□ 0.08
SHKBP1-209ENST00000595803 GAKO14976 1311 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 FAM155AB1AL88 458 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 FOXP2O15409 715 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 ST18O60284 1047 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 USP5P45974 858 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 CRKP46108 304 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 RBM5P52756 815 aaKnown RBP eCLIP15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 CXCL9Q07325 125 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 GIMAP6Q6P9H5 292 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 SH3RF3Q8TEJ3 882 aaPredicted RBP15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 SDR42E1Q8WUS8 393 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 JAKMIP1Q96N16 626 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 IPO9Q96P70 1041 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 TM6SF1Q9BZW5 370 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 ATP8A2Q9NTI2 1148 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 RNF186Q9NXI6 227 aa15.51■□□□□ 0.07
SHKBP1-209ENST00000595803 MAST2Q6P0Q8 1798 aa15.5■□□□□ 0.07
SHKBP1-209ENST00000595803 NEK4P51957 841 aa15.5■□□□□ 0.07
SHKBP1-209ENST00000595803 AGBL3Q8NEM8 1001 aa15.5■□□□□ 0.07
SHKBP1-209ENST00000595803 DAGLAQ9Y4D2 1042 aa15.5■□□□□ 0.07
SHKBP1-209ENST00000595803 MYH2Q9UKX2 1941 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 HAND2P61296 217 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 BLOC1S2Q6QNY1 142 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 HSCBQ8IWL3 235 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 TEX11Q8IYF3 940 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 OGFOD1Q8N543 542 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 SNX21Q969T3 373 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 NEK1Q96PY6 1258 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 USP40Q9NVE5 1235 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 SERPINA10Q9UK55 444 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 CYP46A1Q9Y6A2 500 aa15.49■□□□□ 0.07
SHKBP1-209ENST00000595803 ZMYM6O95789 1325 aa15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 SCN9AQ15858 1988 aa15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 MINDY4BA8MYZ0 360 aa15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 CASTP20810 708 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 KIF23Q02241 960 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 ADCK5Q3MIX3 580 aa15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 RGMBQ6NW40 437 aa15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 TGFBRAP1Q8WUH2 860 aa15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 ZDHHC15Q96MV8 337 aa15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 ZSWIM6Q9HCJ5 1215 aa15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 EPB41L4AQ9HCS5 686 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 PGAP2Q9UHJ9 254 aa15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 ZBTB12Q9Y330 459 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-209ENST00000595803 E7EWF7 191 aa15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 HMGB1P09429 215 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 USP17L8P0C7I0 530 aa15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 TRDNQ13061 729 aa15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 CFAP100Q494V2 611 aa15.47■□□□□ 0.07
SHKBP1-209ENST00000595803 RUFY3Q7L099 469 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms