RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	ARMT1	Q9H993	441 aa		27.63	■■■□□ 2.01
PNKP-205	ENST00000595081	PAPPA2	Q9BXP8	1791 aa		27.63	■■■□□ 2.01
PNKP-205	ENST00000595081	NPM3	O75607	178 aa	Known RBP	27.62	■■■□□ 2.01
PNKP-205	ENST00000595081	HUNK	P57058	714 aa		27.62	■■■□□ 2.01
PNKP-205	ENST00000595081	CERS3	Q8IU89	383 aa		27.62	■■■□□ 2.01
PNKP-205	ENST00000595081	RILPL2	Q969X0	211 aa		27.62	■■■□□ 2.01
PNKP-205	ENST00000595081	PUS7L	Q9H0K6	701 aa	Known RBP	27.62	■■■□□ 2.01
PNKP-205	ENST00000595081	OSBPL5	Q9H0X9	879 aa	Predicted RBP	27.62	■■■□□ 2.01
PNKP-205	ENST00000595081	DDTL	A6NHG4	134 aa	Predicted RBP	27.61	■■■□□ 2.01
PNKP-205	ENST00000595081	UBE2Q2L	H0YL09	131 aa		27.61	■■■□□ 2.01
PNKP-205	ENST00000595081	ZFY	P08048	801 aa	Predicted RBP	27.61	■■■□□ 2.01
PNKP-205	ENST00000595081	FKBP1B	P68106	108 aa		27.61	■■■□□ 2.01
PNKP-205	ENST00000595081	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	27.61	■■■□□ 2.01
PNKP-205	ENST00000595081	MKRN1	Q9UHC7	482 aa	Known RBP	27.61	■■■□□ 2.01
PNKP-205	ENST00000595081	ANGEL1	Q9UNK9	670 aa	Known RBP	27.61	■■■□□ 2.01
PNKP-205	ENST00000595081	FLT1	P17948	1338 aa		27.61	■■■□□ 2.01
PNKP-205	ENST00000595081	LRRFIP1	Q32MZ4	808 aa	Known RBP	27.6	■■■□□ 2.01
PNKP-205	ENST00000595081	TTC22	Q5TAA0	569 aa		27.6	■■■□□ 2.01
PNKP-205	ENST00000595081	APPBP2	Q92624	585 aa		27.6	■■■□□ 2.01
PNKP-205	ENST00000595081	OSBP2	Q969R2	916 aa		27.6	■■■□□ 2.01
PNKP-205	ENST00000595081	CSRNP1	Q96S65	589 aa		27.6	■■■□□ 2.01
PNKP-205	ENST00000595081	CDK5RAP2	Q96SN8	1893 aa		27.59	■■■□□ 2.01
PNKP-205	ENST00000595081	PPP1R12B	O60237	982 aa	Predicted RBP	27.59	■■■□□ 2.01
PNKP-205	ENST00000595081	GSPT1	P15170	499 aa	Known RBP	27.59	■■■□□ 2.01
PNKP-205	ENST00000595081	USP5	P45974	858 aa		27.59	■■■□□ 2.01
PNKP-205	ENST00000595081	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.59	■■■□□ 2.01
PNKP-205	ENST00000595081	RASSF10	A6NK89	507 aa		27.58	■■■□□ 2.01
PNKP-205	ENST00000595081		M0R2C6	588 aa		27.58	■■■□□ 2.01
PNKP-205	ENST00000595081	USP2	O75604	605 aa	Predicted RBP	27.58	■■■□□ 2.01
PNKP-205	ENST00000595081	MIGA2	Q7L4E1	593 aa		27.58	■■■□□ 2.01
PNKP-205	ENST00000595081	ARMC9	Q7Z3E5	817 aa		27.58	■■■□□ 2.01
PNKP-205	ENST00000595081	AIDA	Q96BJ3	306 aa		27.58	■■■□□ 2.01
PNKP-205	ENST00000595081	SEC62	Q99442	399 aa	Known RBP	27.58	■■■□□ 2.01
PNKP-205	ENST00000595081	SAP30BP	Q9UHR5	308 aa	Known RBP	27.58	■■■□□ 2.01
PNKP-205	ENST00000595081	PRKAB2	O43741	272 aa		27.57	■■■□□ 2
PNKP-205	ENST00000595081	DEFB115	Q30KQ5	88 aa		27.57	■■■□□ 2
PNKP-205	ENST00000595081	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	27.57	■■■□□ 2
PNKP-205	ENST00000595081	SDR42E1	Q8WUS8	393 aa		27.57	■■■□□ 2
PNKP-205	ENST00000595081	FOCAD	Q5VW36	1801 aa		27.57	■■■□□ 2
PNKP-205	ENST00000595081	ATRNL1	Q5VV63	1379 aa		27.57	■■■□□ 2
PNKP-205	ENST00000595081	AK9	Q5TCS8	1911 aa		27.57	■■■□□ 2
PNKP-205	ENST00000595081	SLURP2	P0DP57	97 aa		27.56	■■■□□ 2
PNKP-205	ENST00000595081	SLC4A8	Q2Y0W8	1093 aa		27.56	■■■□□ 2
PNKP-205	ENST00000595081	ZMYM1	Q5SVZ6	1142 aa		27.56	■■■□□ 2
PNKP-205	ENST00000595081	HOOK2	Q96ED9	719 aa		27.56	■■■□□ 2
PNKP-205	ENST00000595081	COL2A1	P02458	1487 aa	Predicted RBP	27.56	■■■□□ 2
PNKP-205	ENST00000595081	MAP3K11	Q16584	847 aa		27.55	■■■□□ 2
PNKP-205	ENST00000595081	DNAJC5G	Q8N7S2	189 aa		27.55	■■■□□ 2
PNKP-205	ENST00000595081	PALD1	Q9ULE6	856 aa		27.55	■■■□□ 2
PNKP-205	ENST00000595081	IREB2	P48200	963 aa	Known RBP	27.54	■■■□□ 2
PNKP-205	ENST00000595081	GRM1	Q13255	1194 aa		27.54	■■■□□ 2
PNKP-205	ENST00000595081	LDLRAD1	Q5T700	205 aa		27.54	■■■□□ 2
PNKP-205	ENST00000595081	DCAF15	Q66K64	600 aa		27.54	■■■□□ 2
PNKP-205	ENST00000595081	CYP4F22	Q6NT55	531 aa		27.54	■■■□□ 2
PNKP-205	ENST00000595081	STRBP	Q96SI9	672 aa	Known RBP	27.54	■■■□□ 2
PNKP-205	ENST00000595081	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	27.54	■■■□□ 2
PNKP-205	ENST00000595081	GPAA1	O43292	621 aa		27.53	■■■□□ 2
PNKP-205	ENST00000595081	SDS	P20132	328 aa		27.53	■■■□□ 2
PNKP-205	ENST00000595081	HHIPL1	Q96JK4	782 aa		27.53	■■■□□ 2
PNKP-205	ENST00000595081	SLC4A4	Q9Y6R1	1079 aa		27.53	■■■□□ 2
PNKP-205	ENST00000595081	RGMB	Q6NW40	437 aa		27.52	■■■□□ 2
PNKP-205	ENST00000595081	KLRG1	Q96E93	195 aa		27.52	■■■□□ 2
PNKP-205	ENST00000595081	CLMN	Q96JQ2	1002 aa		27.52	■■■□□ 2
PNKP-205	ENST00000595081	FAM227B	Q96M60	508 aa		27.52	■■■□□ 2
PNKP-205	ENST00000595081	ZNF341	Q9BYN7	854 aa		27.52	■■■□□ 2
PNKP-205	ENST00000595081	DHX36	Q9H2U1	1008 aa	Known RBP	27.52	■■■□□ 2
PNKP-205	ENST00000595081	DCP1A	Q9NPI6	582 aa	Predicted RBP	27.52	■■■□□ 2
PNKP-205	ENST00000595081		A0A0D9SFI3	127 aa		27.51	■■□□□ 1.99
PNKP-205	ENST00000595081	FAM196B	A6NMK8	535 aa		27.51	■■□□□ 1.99
PNKP-205	ENST00000595081	VEGFB	P49765	207 aa		27.51	■■□□□ 1.99
PNKP-205	ENST00000595081	ZNF157	P51786	506 aa	Predicted RBP	27.51	■■□□□ 1.99
PNKP-205	ENST00000595081	CCDC129	Q6ZRS4	1044 aa		27.51	■■□□□ 1.99
PNKP-205	ENST00000595081	CAPNS2	Q96L46	248 aa		27.51	■■□□□ 1.99
PNKP-205	ENST00000595081	WRNIP1	Q96S55	665 aa		27.51	■■□□□ 1.99
PNKP-205	ENST00000595081	NMI	Q13287	307 aa	Predicted RBP	27.5	■■□□□ 1.99
PNKP-205	ENST00000595081	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	27.5	■■□□□ 1.99	3e-6	■■■■■ 38.3
PNKP-205	ENST00000595081	PI4KB	Q9UBF8	816 aa		27.5	■■□□□ 1.99
PNKP-205	ENST00000595081	NAV1	Q8NEY1	1877 aa		27.5	■■□□□ 1.99
PNKP-205	ENST00000595081	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	27.49	■■□□□ 1.99
PNKP-205	ENST00000595081	TICAM2	Q86XR7	235 aa		27.49	■■□□□ 1.99
PNKP-205	ENST00000595081	ANKRD13A	Q8IZ07	590 aa		27.49	■■□□□ 1.99
PNKP-205	ENST00000595081	ATP8A2	Q9NTI2	1148 aa		27.49	■■□□□ 1.99
PNKP-205	ENST00000595081	MCM9	Q9NXL9	1143 aa		27.49	■■□□□ 1.99
PNKP-205	ENST00000595081	OTOF	Q9HC10	1997 aa		27.49	■■□□□ 1.99
PNKP-205	ENST00000595081	DDX60L	Q5H9U9	1706 aa	Known RBP	27.49	■■□□□ 1.99
PNKP-205	ENST00000595081	MYH1	P12882	1939 aa		27.48	■■□□□ 1.99
PNKP-205	ENST00000595081	MAP3K9	P80192	1104 aa		27.48	■■□□□ 1.99
PNKP-205	ENST00000595081	MAP3K10	Q02779	954 aa		27.48	■■□□□ 1.99
PNKP-205	ENST00000595081	VGLL4	Q14135	290 aa		27.48	■■□□□ 1.99
PNKP-205	ENST00000595081	RASAL3	Q86YV0	1011 aa		27.48	■■□□□ 1.99
PNKP-205	ENST00000595081	ZKSCAN4	Q969J2	545 aa	Predicted RBP	27.48	■■□□□ 1.99
PNKP-205	ENST00000595081	HELLS	Q9NRZ9	838 aa		27.48	■■□□□ 1.99
PNKP-205	ENST00000595081	SIPA1L1	O43166	1804 aa		27.48	■■□□□ 1.99
PNKP-205	ENST00000595081	WDR33	Q9C0J8	1336 aa	Known RBP	27.47	■■□□□ 1.99
PNKP-205	ENST00000595081	GSG1L2	A8MUP6	293 aa		27.47	■■□□□ 1.99
PNKP-205	ENST00000595081	HLA-DOA	P06340	250 aa		27.47	■■□□□ 1.99
PNKP-205	ENST00000595081	CYP2D6	P10635	497 aa		27.47	■■□□□ 1.99
PNKP-205	ENST00000595081	INPP5B	P32019	993 aa		27.47	■■□□□ 1.99
PNKP-205	ENST00000595081	EVX2	Q03828	476 aa		27.47	■■□□□ 1.99
PNKP-205	ENST00000595081	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	27.47	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms