RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 DYNLL1P63167 89 aaKnown RBP23.66■■□□□ 1.38
LSM4-203ENST00000593829 ARMC9Q7Z3E5 817 aa23.66■■□□□ 1.38
LSM4-203ENST00000593829 ZFPM1Q8IX07 1006 aa23.66■■□□□ 1.38
LSM4-203ENST00000593829 HOOK2Q96ED9 719 aa23.66■■□□□ 1.38
LSM4-203ENST00000593829 MAGEB6P1A0A0J9YX57 407 aa23.65■■□□□ 1.38
LSM4-203ENST00000593829 UBE3CQ15386 1083 aa23.65■■□□□ 1.38
LSM4-203ENST00000593829 MOB2Q70IA6 237 aa23.65■■□□□ 1.38
LSM4-203ENST00000593829 KLRG1Q96E93 195 aa23.65■■□□□ 1.38
LSM4-203ENST00000593829 OSBPL3Q9H4L5 887 aa23.65■■□□□ 1.38
LSM4-203ENST00000593829 ANGEL1Q9UNK9 670 aaKnown RBP23.65■■□□□ 1.38
LSM4-203ENST00000593829 UBE2Q2LH0YL09 131 aa23.64■■□□□ 1.37
LSM4-203ENST00000593829 PAXIP1Q6ZW49 1069 aaPredicted RBP23.64■■□□□ 1.37
LSM4-203ENST00000593829 LRRFIP1Q32MZ4 808 aaKnown RBP23.63■■□□□ 1.37
LSM4-203ENST00000593829 ZSCAN29Q8IWY8 852 aaPredicted RBP23.63■■□□□ 1.37
LSM4-203ENST00000593829 RIOK1Q9BRS2 568 aaKnown RBP23.63■■□□□ 1.37
LSM4-203ENST00000593829 FZD1Q9UP38 647 aa23.63■■□□□ 1.37
LSM4-203ENST00000593829 MAP3K11Q16584 847 aa23.63■■□□□ 1.37
LSM4-203ENST00000593829 TGFBRAP1Q8WUH2 860 aa23.63■■□□□ 1.37
LSM4-203ENST00000593829 IREB2P48200 963 aaKnown RBP23.62■■□□□ 1.37
LSM4-203ENST00000593829 SLFNL1Q499Z3 407 aa23.62■■□□□ 1.37
LSM4-203ENST00000593829 RGMBQ6NW40 437 aa23.62■■□□□ 1.37
LSM4-203ENST00000593829 EVI5LQ96CN4 794 aa23.62■■□□□ 1.37
LSM4-203ENST00000593829 FSD1Q9BTV5 496 aa23.62■■□□□ 1.37
LSM4-203ENST00000593829 OSBPL5Q9H0X9 879 aaPredicted RBP23.62■■□□□ 1.37
LSM4-203ENST00000593829 RNF113AO15541 343 aaKnown RBP23.61■■□□□ 1.37
LSM4-203ENST00000593829 USP2O75604 605 aaPredicted RBP23.61■■□□□ 1.37
LSM4-203ENST00000593829 CHGBP05060 677 aa23.61■■□□□ 1.37
LSM4-203ENST00000593829 ZFYP08048 801 aaPredicted RBP23.61■■□□□ 1.37
LSM4-203ENST00000593829 ECE1P42892 770 aa23.61■■□□□ 1.37
LSM4-203ENST00000593829 DCAF15Q66K64 600 aa23.61■■□□□ 1.37
LSM4-203ENST00000593829 CSRNP1Q96S65 589 aa23.61■■□□□ 1.37
LSM4-203ENST00000593829 VEGFBP49765 207 aa23.61■■□□□ 1.37
LSM4-203ENST00000593829 LDLRAD1Q5T700 205 aa23.61■■□□□ 1.37
LSM4-203ENST00000593829 CYP4F22Q6NT55 531 aa23.61■■□□□ 1.37
LSM4-203ENST00000593829 SH3BP5LQ7L8J4 393 aa23.61■■□□□ 1.37
LSM4-203ENST00000593829 MYH7P12883 1935 aa23.6■■□□□ 1.37
LSM4-203ENST00000593829 FLT1P17948 1338 aa23.6■■□□□ 1.37
LSM4-203ENST00000593829 DDTLA6NHG4 134 aaPredicted RBP23.6■■□□□ 1.37
LSM4-203ENST00000593829 MAPKAPK5Q8IW41 473 aa23.6■■□□□ 1.37
LSM4-203ENST00000593829 CAPNS2Q96L46 248 aa23.6■■□□□ 1.37
LSM4-203ENST00000593829 ATRNL1Q5VV63 1379 aa23.6■■□□□ 1.37
LSM4-203ENST00000593829 COL2A1P02458 1487 aaPredicted RBP23.59■■□□□ 1.37
LSM4-203ENST00000593829 USP5P45974 858 aa23.59■■□□□ 1.37
LSM4-203ENST00000593829 ZNF157P51786 506 aaPredicted RBP23.59■■□□□ 1.37
LSM4-203ENST00000593829 MIGA2Q7L4E1 593 aa23.59■■□□□ 1.37
LSM4-203ENST00000593829 CRNKL1Q9BZJ0 848 aaKnown RBP23.59■■□□□ 1.37
LSM4-203ENST00000593829 WDR33Q9C0J8 1336 aaKnown RBP23.59■■□□□ 1.37
LSM4-203ENST00000593829 UNCXA6NJT0 531 aa23.59■■□□□ 1.37
LSM4-203ENST00000593829 MBD4O95243 580 aa23.59■■□□□ 1.37
LSM4-203ENST00000593829 GRM1Q13255 1194 aa23.59■■□□□ 1.37
LSM4-203ENST00000593829 LCORLQ8N3X6 602 aa23.59■■□□□ 1.37
LSM4-203ENST00000593829 TRIM6-TRIM34B2RNG4 842 aa23.58■■□□□ 1.37
LSM4-203ENST00000593829 APPBP2Q92624 585 aa23.58■■□□□ 1.37
LSM4-203ENST00000593829 CCDC102AQ96A19 550 aa23.58■■□□□ 1.37
LSM4-203ENST00000593829 PUS7LQ9H0K6 701 aaKnown RBP23.58■■□□□ 1.37
LSM4-203ENST00000593829 DHX36Q9H2U1 1008 aaKnown RBP23.58■■□□□ 1.37
LSM4-203ENST00000593829 ARMT1Q9H993 441 aa23.58■■□□□ 1.37
LSM4-203ENST00000593829 AK9Q5TCS8 1911 aa23.58■■□□□ 1.36
LSM4-203ENST00000593829 ANKRD13AQ8IZ07 590 aa23.57■■□□□ 1.36
LSM4-203ENST00000593829 AIDAQ96BJ3 306 aa23.57■■□□□ 1.36
LSM4-203ENST00000593829 ZNF341Q9BYN7 854 aa23.57■■□□□ 1.36
LSM4-203ENST00000593829 TICAM2Q86XR7 235 aa23.56■■□□□ 1.36
LSM4-203ENST00000593829 FOCADQ5VW36 1801 aa23.56■■□□□ 1.36
LSM4-203ENST00000593829 CDK5RAP2Q96SN8 1893 aa23.56■■□□□ 1.36
LSM4-203ENST00000593829 MAP3K9P80192 1104 aa23.55■■□□□ 1.36
LSM4-203ENST00000593829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.55■■□□□ 1.362e-8■■■□□ 17.4
LSM4-203ENST00000593829 OSBP2Q969R2 916 aa23.55■■□□□ 1.36
LSM4-203ENST00000593829 RILPL2Q969X0 211 aa23.55■■□□□ 1.36
LSM4-203ENST00000593829 MAP3K10Q02779 954 aa23.55■■□□□ 1.36
LSM4-203ENST00000593829 SLC10A4Q96EP9 437 aa23.55■■□□□ 1.36
LSM4-203ENST00000593829 WRNIP1Q96S55 665 aa23.55■■□□□ 1.36
LSM4-203ENST00000593829 PI4KBQ9UBF8 816 aa23.55■■□□□ 1.36
LSM4-203ENST00000593829 SAP30BPQ9UHR5 308 aaKnown RBP23.55■■□□□ 1.36
LSM4-203ENST00000593829 SLC10A3P09131 477 aa23.54■■□□□ 1.36
LSM4-203ENST00000593829 RASAL3Q86YV0 1011 aa23.54■■□□□ 1.36
LSM4-203ENST00000593829 CLMNQ96JQ2 1002 aa23.54■■□□□ 1.36
LSM4-203ENST00000593829 PALD1Q9ULE6 856 aa23.54■■□□□ 1.36
LSM4-203ENST00000593829 FAM155AB1AL88 458 aaPredicted RBP23.53■■□□□ 1.36
LSM4-203ENST00000593829 NOGQ13253 232 aa23.53■■□□□ 1.36
LSM4-203ENST00000593829 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.53■■□□□ 1.36
LSM4-203ENST00000593829 SDR42E1Q8WUS8 393 aa23.53■■□□□ 1.36
LSM4-203ENST00000593829 CSADQ9Y600 493 aa23.53■■□□□ 1.36
LSM4-203ENST00000593829 TBC1D12O60347 775 aa23.53■■□□□ 1.36
LSM4-203ENST00000593829 ZMYM1Q5SVZ6 1142 aa23.53■■□□□ 1.36
LSM4-203ENST00000593829 JMYQ8N9B5 988 aa23.53■■□□□ 1.36
LSM4-203ENST00000593829 STRBPQ96SI9 672 aaKnown RBP23.53■■□□□ 1.36
LSM4-203ENST00000593829 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.53■■□□□ 1.36
LSM4-203ENST00000593829 ZNF112Q9UJU3 913 aa23.53■■□□□ 1.36
LSM4-203ENST00000593829 AOC2O75106 756 aa23.52■■□□□ 1.36
LSM4-203ENST00000593829 HLA-DOAP06340 250 aa23.52■■□□□ 1.36
LSM4-203ENST00000593829 TTC22Q5TAA0 569 aa23.52■■□□□ 1.36
LSM4-203ENST00000593829 DCP1AQ9NPI6 582 aaPredicted RBP23.52■■□□□ 1.36
LSM4-203ENST00000593829 ATP8A2Q9NTI2 1148 aa23.52■■□□□ 1.36
LSM4-203ENST00000593829 SLC4A4Q9Y6R1 1079 aa23.52■■□□□ 1.36
LSM4-203ENST00000593829 PRKAB2O43741 272 aa23.51■■□□□ 1.35
LSM4-203ENST00000593829 MAP2K2P36507 400 aa23.51■■□□□ 1.35
LSM4-203ENST00000593829 VGLL4Q14135 290 aa23.51■■□□□ 1.35
LSM4-203ENST00000593829 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.51■■□□□ 1.35
LSM4-203ENST00000593829 HERC5Q9UII4 1024 aaKnown RBP23.51■■□□□ 1.35
LSM4-203ENST00000593829 M0R2C6 588 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms