RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SRRDQ9UH36 339 aa18.27■□□□□ 0.52
PNKP-202ENST00000593706 OSBPP22059 807 aa18.26■□□□□ 0.51
PNKP-202ENST00000593706 CTGFP29279 349 aa18.26■□□□□ 0.51
PNKP-202ENST00000593706 RASGRF1Q13972 1273 aa18.26■□□□□ 0.51
PNKP-202ENST00000593706 ZFPM1Q8IX07 1006 aa18.26■□□□□ 0.51
PNKP-202ENST00000593706 SLF2Q8IX21 1173 aa18.26■□□□□ 0.51
PNKP-202ENST00000593706 MEIS3Q99687 375 aa18.26■□□□□ 0.51
PNKP-202ENST00000593706 RFX7Q2KHR2 1363 aa18.26■□□□□ 0.51
PNKP-202ENST00000593706 ATRNL1Q5VV63 1379 aa18.26■□□□□ 0.51
PNKP-202ENST00000593706 GAKO14976 1311 aa18.25■□□□□ 0.51
PNKP-202ENST00000593706 ENTPD3O75355 529 aa18.25■□□□□ 0.51
PNKP-202ENST00000593706 PICALMQ13492 652 aa18.25■□□□□ 0.51
PNKP-202ENST00000593706 MOGSQ13724 837 aa18.25■□□□□ 0.51
PNKP-202ENST00000593706 SCYL3Q8IZE3 742 aa18.25■□□□□ 0.51
PNKP-202ENST00000593706 IDI2Q9BXS1 227 aa18.25■□□□□ 0.51
PNKP-202ENST00000593706 COPRSQ9NQ92 184 aa18.25■□□□□ 0.51
PNKP-202ENST00000593706 PDS5AQ29RF7 1337 aaKnown RBP18.24■□□□□ 0.51
PNKP-202ENST00000593706 CXCL11O14625 94 aa18.24■□□□□ 0.51
PNKP-202ENST00000593706 CYP2C8P10632 490 aa18.24■□□□□ 0.51
PNKP-202ENST00000593706 GRK4P32298 578 aa18.24■□□□□ 0.51
PNKP-202ENST00000593706 FCGRTP55899 365 aa18.24■□□□□ 0.51
PNKP-202ENST00000593706 SPTY2D1Q68D10 685 aaPredicted RBP18.24■□□□□ 0.51
PNKP-202ENST00000593706 GADL1Q6ZQY3 521 aa18.24■□□□□ 0.51
PNKP-202ENST00000593706 BIN2Q9UBW5 565 aaPredicted RBP18.24■□□□□ 0.51
PNKP-202ENST00000593706 ZHX2Q9Y6X8 837 aa18.24■□□□□ 0.51
PNKP-202ENST00000593706 A0A1B0GUL7 405 aa18.23■□□□□ 0.51
PNKP-202ENST00000593706 SRGAP3O43295 1099 aa18.23■□□□□ 0.51
PNKP-202ENST00000593706 BTDP43251 543 aa18.23■□□□□ 0.51
PNKP-202ENST00000593706 TIMM10P62072 90 aa18.23■□□□□ 0.51
PNKP-202ENST00000593706 HNRNPUQ00839 825 aaKnown RBP eCLIP18.23■□□□□ 0.51
PNKP-202ENST00000593706 MVPQ14764 893 aaKnown RBP18.23■□□□□ 0.51
PNKP-202ENST00000593706 MTFR1Q15390 333 aa18.23■□□□□ 0.51
PNKP-202ENST00000593706 FASTKD5Q7L8L6 764 aaKnown RBP18.23■□□□□ 0.51
PNKP-202ENST00000593706 AKAP2Q9Y2D5 859 aa18.23■□□□□ 0.51
PNKP-202ENST00000593706 SIPA1L1O43166 1804 aa18.23■□□□□ 0.51
PNKP-202ENST00000593706 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
PNKP-202ENST00000593706 A0A0G2JLL6 359 aaPredicted RBP18.22■□□□□ 0.51
PNKP-202ENST00000593706 PHF20L1A8MW92 1017 aa18.22■□□□□ 0.51
PNKP-202ENST00000593706 GNAI3P08754 354 aa18.22■□□□□ 0.51
PNKP-202ENST00000593706 PTPRAP18433 802 aa18.22■□□□□ 0.51
PNKP-202ENST00000593706 GPAT2Q6NUI2 795 aa18.22■□□□□ 0.51
PNKP-202ENST00000593706 PRRT2Q7Z6L0 340 aaPredicted RBP18.22■□□□□ 0.51
PNKP-202ENST00000593706 XAGE2Q96GT9 111 aa18.22■□□□□ 0.51
PNKP-202ENST00000593706 BCRP11274 1271 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 UBXN2AP68543 259 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 PRKCZQ05513 592 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 TFCP2Q12800 502 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 ERICH6Q7L0X2 663 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 SH3BP5LQ7L8J4 393 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 NKX2-3Q8TAU0 364 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 SMCR8Q8TEV9 937 aaPredicted RBP18.21■□□□□ 0.51
PNKP-202ENST00000593706 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 SHISA4Q96DD7 197 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 MYH1P12882 1939 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 ALPK3Q96L96 1907 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 ZBED9Q6R2W3 1325 aa18.21■□□□□ 0.51
PNKP-202ENST00000593706 DDTLA6NHG4 134 aaPredicted RBP18.2■□□□□ 0.5
PNKP-202ENST00000593706 TRIM75PA6NK02 468 aa18.2■□□□□ 0.5
PNKP-202ENST00000593706 H0YGN5 161 aa18.2■□□□□ 0.5
PNKP-202ENST00000593706 ZBTB22O15209 634 aa18.2■□□□□ 0.5
PNKP-202ENST00000593706 CTNND1O60716 968 aaKnown RBP18.2■□□□□ 0.5
PNKP-202ENST00000593706 CCL5P13501 91 aa18.2■□□□□ 0.5
PNKP-202ENST00000593706 MECOMQ03112 1051 aa18.2■□□□□ 0.5
PNKP-202ENST00000593706 GORABQ5T7V8 394 aa18.2■□□□□ 0.5
PNKP-202ENST00000593706 SLAIN1Q8ND83 568 aa18.2■□□□□ 0.5
PNKP-202ENST00000593706 NEUROD6Q96NK8 337 aa18.2■□□□□ 0.5
PNKP-202ENST00000593706 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
PNKP-202ENST00000593706 COLQQ9Y215 455 aaPredicted RBP18.2■□□□□ 0.5
PNKP-202ENST00000593706 AFG3L2Q9Y4W6 797 aa18.2■□□□□ 0.5
PNKP-202ENST00000593706 FXR1P51114 621 aaKnown RBP eCLIP18.19■□□□□ 0.5
PNKP-202ENST00000593706 RNF208Q9H0X6 261 aa18.19■□□□□ 0.5
PNKP-202ENST00000593706 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.19■□□□□ 0.5
PNKP-202ENST00000593706 SLURP2P0DP57 97 aa18.18■□□□□ 0.5
PNKP-202ENST00000593706 DPF3Q92784 378 aa18.18■□□□□ 0.5
PNKP-202ENST00000593706 FAM163AQ96GL9 167 aaPredicted RBP18.18■□□□□ 0.5
PNKP-202ENST00000593706 SLC45A1Q9Y2W3 748 aa18.18■□□□□ 0.5
PNKP-202ENST00000593706 COL2A1P02458 1487 aaPredicted RBP18.18■□□□□ 0.5
PNKP-202ENST00000593706 TNPO2O14787 897 aaKnown RBP18.17■□□□□ 0.5
PNKP-202ENST00000593706 BCAR3O75815 825 aa18.17■□□□□ 0.5
PNKP-202ENST00000593706 GJB1P08034 283 aa18.17■□□□□ 0.5
PNKP-202ENST00000593706 TRIM27P14373 513 aa18.17■□□□□ 0.5
PNKP-202ENST00000593706 GJA8P48165 433 aa18.17■□□□□ 0.5
PNKP-202ENST00000593706 GSTO1P78417 241 aa18.17■□□□□ 0.5
PNKP-202ENST00000593706 MAP3K10Q02779 954 aa18.17■□□□□ 0.5
PNKP-202ENST00000593706 MTX1Q13505 466 aa18.17■□□□□ 0.5
PNKP-202ENST00000593706 CCDC84Q86UT8 332 aaPredicted RBP18.17■□□□□ 0.5
PNKP-202ENST00000593706 SPATA5Q8NB90 893 aa18.17■□□□□ 0.5
PNKP-202ENST00000593706 GABRQQ9UN88 632 aa18.17■□□□□ 0.5
PNKP-202ENST00000593706 LAMA3Q16787 3333 aa18.16■□□□□ 0.5
PNKP-202ENST00000593706 GPR75-ASB3A0A0A6YYF3 556 aa18.16■□□□□ 0.5
PNKP-202ENST00000593706 FAM196BA6NMK8 535 aa18.16■□□□□ 0.5
PNKP-202ENST00000593706 ADCY3O60266 1144 aa18.16■□□□□ 0.5
PNKP-202ENST00000593706 LDHCP07864 332 aa18.16■□□□□ 0.5
PNKP-202ENST00000593706 PI16Q6UXB8 463 aa18.16■□□□□ 0.5
PNKP-202ENST00000593706 HTATIP2Q9BUP3 242 aa18.16■□□□□ 0.5
PNKP-202ENST00000593706 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.16■□□□□ 0.5
PNKP-202ENST00000593706 RAI14Q9P0K7 980 aa18.16■□□□□ 0.5
PNKP-202ENST00000593706 HMG20BQ9P0W2 317 aa18.16■□□□□ 0.5
PNKP-202ENST00000593706 PNMA3Q9UL41 463 aa18.16■□□□□ 0.5
PNKP-202ENST00000593706 TAOK2Q9UL54 1235 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms