RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 SPAG1Q07617 926 aa17.3■□□□□ 0.36
SYMPK-202ENST00000593504 IQUBQ8NA54 791 aa17.3■□□□□ 0.36
SYMPK-202ENST00000593504 GOLGA6L9A6NEM1 432 aa17.3■□□□□ 0.36
SYMPK-202ENST00000593504 ENOX2Q16206 610 aaKnown RBP17.3■□□□□ 0.36
SYMPK-202ENST00000593504 ARHGEF28Q8N1W1 1705 aaKnown RBP17.3■□□□□ 0.36
SYMPK-202ENST00000593504 SDR42E1Q8WUS8 393 aa17.3■□□□□ 0.36
SYMPK-202ENST00000593504 PRIMPOLQ96LW4 560 aa17.3■□□□□ 0.36
SYMPK-202ENST00000593504 STX17P56962 302 aa17.3■□□□□ 0.36
SYMPK-202ENST00000593504 SCRN1Q12765 414 aa17.3■□□□□ 0.36
SYMPK-202ENST00000593504 PI16Q6UXB8 463 aa17.3■□□□□ 0.36
SYMPK-202ENST00000593504 ERMNQ8TAM6 284 aa17.3■□□□□ 0.36
SYMPK-202ENST00000593504 PSMA7O14818 248 aa17.29■□□□□ 0.36
SYMPK-202ENST00000593504 PDIA3P30101 505 aaKnown RBP17.29■□□□□ 0.36
SYMPK-202ENST00000593504 TDRD12Q587J7 1177 aaKnown RBP17.29■□□□□ 0.36
SYMPK-202ENST00000593504 PIK3AP1Q6ZUJ8 805 aa17.29■□□□□ 0.36
SYMPK-202ENST00000593504 USP17L12C9JPN9 530 aa17.29■□□□□ 0.36
SYMPK-202ENST00000593504 USP17L21D6R901 530 aa17.29■□□□□ 0.36
SYMPK-202ENST00000593504 CUTAO60888 179 aa17.29■□□□□ 0.36
SYMPK-202ENST00000593504 MATR3P43243 847 aaKnown RBP eCLIP17.29■□□□□ 0.36
SYMPK-202ENST00000593504 MAPKAPK5Q8IW41 473 aa17.29■□□□□ 0.36
SYMPK-202ENST00000593504 CERS3Q8IU89 383 aa17.29■□□□□ 0.36
SYMPK-202ENST00000593504 VEZTQ9HBM0 779 aa17.29■□□□□ 0.36
SYMPK-202ENST00000593504 ADD1P35611 737 aaKnown RBP17.28■□□□□ 0.36
SYMPK-202ENST00000593504 TRAF1Q13077 416 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 FAM47AQ5JRC9 791 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 ZNF654Q8IZM8 581 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 TGFBRAP1Q8WUH2 860 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 TAF4BQ92750 862 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 CBX8Q9HC52 389 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 ZNF202O95125 648 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 NECTIN1Q15223 517 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 SPECC1Q5M775 1068 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 DPP8Q6V1X1 898 aaPredicted RBP17.28■□□□□ 0.36
SYMPK-202ENST00000593504 PAXBP1Q9Y5B6 917 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.28■□□□□ 0.366e-7■■■■□ 19.3
SYMPK-202ENST00000593504 hCG_1642624A0A1W2PR95 340 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 KCNQ4P56696 695 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 MYL5Q02045 173 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 HLFQ16534 295 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 SMARCC2Q8TAQ2 1214 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 PLIN2Q99541 437 aa17.28■□□□□ 0.36
SYMPK-202ENST00000593504 ITSN1Q15811 1721 aa17.27■□□□□ 0.36
SYMPK-202ENST00000593504 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
SYMPK-202ENST00000593504 TRMT1LQ7Z2T5 733 aaKnown RBP17.27■□□□□ 0.36
SYMPK-202ENST00000593504 USO1O60763 962 aaKnown RBP17.27■□□□□ 0.36
SYMPK-202ENST00000593504 TFAP4Q01664 338 aa17.27■□□□□ 0.36
SYMPK-202ENST00000593504 TCERG1LQ5VWI1 586 aa17.27■□□□□ 0.36
SYMPK-202ENST00000593504 TTLL11Q8NHH1 800 aa17.27■□□□□ 0.36
SYMPK-202ENST00000593504 ARPP21Q9UBL0 812 aaPredicted RBP17.27■□□□□ 0.36
SYMPK-202ENST00000593504 WWC3Q9ULE0 1092 aa17.27■□□□□ 0.36
SYMPK-202ENST00000593504 ZMYM6O95789 1325 aa17.27■□□□□ 0.36
SYMPK-202ENST00000593504 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.35
SYMPK-202ENST00000593504 GNG11P61952 73 aa17.27■□□□□ 0.35
SYMPK-202ENST00000593504 KRT79Q5XKE5 535 aa17.27■□□□□ 0.35
SYMPK-202ENST00000593504 OSBP2Q969R2 916 aa17.27■□□□□ 0.35
SYMPK-202ENST00000593504 USP28Q96RU2 1077 aa17.27■□□□□ 0.35
SYMPK-202ENST00000593504 GPCPD1Q9NPB8 672 aa17.27■□□□□ 0.35
SYMPK-202ENST00000593504 LIG1P18858 919 aa17.27■□□□□ 0.35
SYMPK-202ENST00000593504 LETM2Q2VYF4 491 aa17.27■□□□□ 0.35
SYMPK-202ENST00000593504 TMCO3Q6UWJ1 677 aa17.27■□□□□ 0.35
SYMPK-202ENST00000593504 CD163L1Q9NR16 1453 aa17.26■□□□□ 0.35
SYMPK-202ENST00000593504 TRIM21P19474 475 aaKnown RBP17.26■□□□□ 0.35
SYMPK-202ENST00000593504 AXDND1Q5T1B0 1012 aaPredicted RBP17.26■□□□□ 0.35
SYMPK-202ENST00000593504 SAMM50Q9Y512 469 aa17.26■□□□□ 0.35
SYMPK-202ENST00000593504 MED23Q9ULK4 1368 aa17.26■□□□□ 0.35
SYMPK-202ENST00000593504 TBCAO75347 108 aaKnown RBP17.26■□□□□ 0.35
SYMPK-202ENST00000593504 ADD2P35612 726 aa17.26■□□□□ 0.35
SYMPK-202ENST00000593504 ERFEQ4G0M1 354 aa17.26■□□□□ 0.35
SYMPK-202ENST00000593504 TTC38Q5R3I4 469 aa17.26■□□□□ 0.35
SYMPK-202ENST00000593504 POLR2DO15514 142 aaKnown RBP17.26■□□□□ 0.35
SYMPK-202ENST00000593504 EIF3JO75822 258 aaKnown RBP17.26■□□□□ 0.35
SYMPK-202ENST00000593504 WWC2Q6AWC2 1192 aa17.26■□□□□ 0.35
SYMPK-202ENST00000593504 LARGE1O95461 756 aa17.25■□□□□ 0.35
SYMPK-202ENST00000593504 SKIDA1Q1XH10 827 aa17.25■□□□□ 0.35
SYMPK-202ENST00000593504 VPS36Q86VN1 386 aa17.25■□□□□ 0.35
SYMPK-202ENST00000593504 CMTR1Q8N1G2 835 aaKnown RBP17.25■□□□□ 0.35
SYMPK-202ENST00000593504 VPS54Q9P1Q0 977 aa17.25■□□□□ 0.35
SYMPK-202ENST00000593504 THRAP3Q9Y2W1 955 aaKnown RBP17.25■□□□□ 0.35
SYMPK-202ENST00000593504 ZSCAN10Q96SZ4 725 aaPredicted RBP17.25■□□□□ 0.35
SYMPK-202ENST00000593504 PUS7LQ9H0K6 701 aaKnown RBP17.25■□□□□ 0.35
SYMPK-202ENST00000593504 SPDYE3A6NKU9 549 aa17.25■□□□□ 0.35
SYMPK-202ENST00000593504 SUSD4Q5VX71 490 aa17.25■□□□□ 0.35
SYMPK-202ENST00000593504 TBC1D22AQ8WUA7 517 aa17.25■□□□□ 0.35
SYMPK-202ENST00000593504 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.25■□□□□ 0.35
SYMPK-202ENST00000593504 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
SYMPK-202ENST00000593504 TNKSO95271 1327 aa17.24■□□□□ 0.35
SYMPK-202ENST00000593504 GAS2L3Q86XJ1 694 aa17.24■□□□□ 0.35
SYMPK-202ENST00000593504 DYNC1I1O14576 645 aa17.24■□□□□ 0.35
SYMPK-202ENST00000593504 STXBP4Q6ZWJ1 553 aa17.24■□□□□ 0.35
SYMPK-202ENST00000593504 FANCBQ8NB91 859 aa17.24■□□□□ 0.35
SYMPK-202ENST00000593504 ATP10DQ9P241 1426 aa17.24■□□□□ 0.35
SYMPK-202ENST00000593504 COL3A1P02461 1466 aaPredicted RBP17.23■□□□□ 0.35
SYMPK-202ENST00000593504 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
SYMPK-202ENST00000593504 NR1I2O75469 434 aa17.23■□□□□ 0.35
SYMPK-202ENST00000593504 MFSD14BQ5SR56 506 aa17.23■□□□□ 0.35
SYMPK-202ENST00000593504 ADALQ6DHV7 355 aa17.23■□□□□ 0.35
SYMPK-202ENST00000593504 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.23■□□□□ 0.35
SYMPK-202ENST00000593504 PALLDQ8WX93 1383 aa17.23■□□□□ 0.35
SYMPK-202ENST00000593504 RRAGDQ9NQL2 400 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms