RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 NOGQ13253 232 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 TTF1Q15361 905 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-220ENST00000593008 ZMYM1Q5SVZ6 1142 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 COL13A1Q5TAT6 717 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-220ENST00000593008 NAA16Q6N069 864 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-220ENST00000593008 CWC27Q6UX04 472 aaKnown RBP11.64□□□□□ -0.55
DDX39A-220ENST00000593008 ARMC9Q7Z3E5 817 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 AATFQ9NY61 560 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX39A-220ENST00000593008 TSKSQ9UJT2 592 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 PPP2R3BQ9Y5P8 575 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 MYH2Q9UKX2 1941 aa11.64□□□□□ -0.55
DDX39A-220ENST00000593008 GAKO14976 1311 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 SSC5DA1L4H1 1573 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 SMIM22K7EJ46 135 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 FOXP2O15409 715 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 SLC10A3P09131 477 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 KIF23Q02241 960 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-220ENST00000593008 TNFAIP1Q13829 316 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 SUPT20HL1Q3ZLR7 823 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 VPS53Q5VIR6 699 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 CDC42EP5Q6NZY7 148 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 HHIPL2Q6UWX4 724 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 RASAL3Q86YV0 1011 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 ZGPATQ8N5A5 531 aaKnown RBP11.63□□□□□ -0.55
DDX39A-220ENST00000593008 SH3RF3Q8TEJ3 882 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-220ENST00000593008 RIOK1Q9BRS2 568 aaKnown RBP11.63□□□□□ -0.55
DDX39A-220ENST00000593008 BEGAINQ9BUH8 593 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 MRIQ9BWK5 157 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 TMOD2Q9NZR1 351 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 PAPPA2Q9BXP8 1791 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 RFX7Q2KHR2 1363 aa11.63□□□□□ -0.55
DDX39A-220ENST00000593008 CDC45O75419 566 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 TNNI2P48788 182 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 CTCFP49711 727 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-220ENST00000593008 LBX1P52954 281 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 TCP10Q12799 353 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 NFIAQ12857 509 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 SLC4A8Q2Y0W8 1093 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 C8orf34Q49A92 452 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 SPTY2D1Q68D10 685 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-220ENST00000593008 CLMNQ96JQ2 1002 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 TEPSINQ96N21 525 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 DIAPH3Q9NSV4 1193 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 USP40Q9NVE5 1235 aa11.62□□□□□ -0.55
DDX39A-220ENST00000593008 GPAA1O43292 621 aa11.61□□□□□ -0.55
DDX39A-220ENST00000593008 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
DDX39A-220ENST00000593008 SEC24BO95487 1268 aa11.61□□□□□ -0.55
DDX39A-220ENST00000593008 SLURP2P0DP57 97 aa11.61□□□□□ -0.55
DDX39A-220ENST00000593008 RHBDL3P58872 404 aa11.61□□□□□ -0.55
DDX39A-220ENST00000593008 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
DDX39A-220ENST00000593008 LDLRAD1Q5T700 205 aa11.61□□□□□ -0.55
DDX39A-220ENST00000593008 SDR42E1Q8WUS8 393 aa11.61□□□□□ -0.55
DDX39A-220ENST00000593008 APPBP2Q92624 585 aa11.61□□□□□ -0.55
DDX39A-220ENST00000593008 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.61□□□□□ -0.554e-20■□□□□ 10.4
DDX39A-220ENST00000593008 EPB41L4AQ9HCS5 686 aaPredicted RBP11.61□□□□□ -0.55
DDX39A-220ENST00000593008 DDX4Q9NQI0 724 aaKnown RBP11.61□□□□□ -0.55
DDX39A-220ENST00000593008 CDK5RAP2Q96SN8 1893 aa11.61□□□□□ -0.55
DDX39A-220ENST00000593008 THSD7BQ9C0I4 1608 aa11.6□□□□□ -0.55
DDX39A-220ENST00000593008 DDX60LQ5H9U9 1706 aaKnown RBP11.6□□□□□ -0.55
DDX39A-220ENST00000593008 GPR75-ASB3A0A0A6YYF3 556 aa11.6□□□□□ -0.55
DDX39A-220ENST00000593008 MAGEB6P1A0A0J9YX57 407 aa11.6□□□□□ -0.55
DDX39A-220ENST00000593008 USP2O75604 605 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-220ENST00000593008 HSPA8P11142 646 aaKnown RBP11.6□□□□□ -0.55
DDX39A-220ENST00000593008 MAPKAPK5Q8IW41 473 aa11.6□□□□□ -0.55
DDX39A-220ENST00000593008 ZFPM1Q8IX07 1006 aa11.6□□□□□ -0.55
DDX39A-220ENST00000593008 ESYT1Q9BSJ8 1104 aa11.6□□□□□ -0.55
DDX39A-220ENST00000593008 ECM29Q5VYK3 1845 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 CYP2D7A0A087X1C5 515 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 WDHD1O75717 1129 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-220ENST00000593008 CYP2D6P10635 497 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 IREB2P48200 963 aaKnown RBP11.59□□□□□ -0.55
DDX39A-220ENST00000593008 PTH1RQ03431 593 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 PICALMQ13492 652 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 FAM83AQ86UY5 434 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 CSRNP1Q96S65 589 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 STRBPQ96SI9 672 aaKnown RBP11.59□□□□□ -0.55
DDX39A-220ENST00000593008 FAM198AQ9UFP1 575 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 NAV1Q8NEY1 1877 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 CCDC171Q6TFL3 1326 aa11.59□□□□□ -0.55
DDX39A-220ENST00000593008 SGSM2O43147 1006 aa11.58□□□□□ -0.56
DDX39A-220ENST00000593008 GSTO1P78417 241 aa11.58□□□□□ -0.56
DDX39A-220ENST00000593008 MAP3K11Q16584 847 aa11.58□□□□□ -0.56
DDX39A-220ENST00000593008 FKBP1CQ5VVH2 108 aa11.58□□□□□ -0.56
DDX39A-220ENST00000593008 ZSCAN25Q6NSZ9 544 aa11.58□□□□□ -0.56
DDX39A-220ENST00000593008 SLF2Q8IX21 1173 aa11.58□□□□□ -0.56
DDX39A-220ENST00000593008 TEX11Q8IYF3 940 aa11.58□□□□□ -0.56
DDX39A-220ENST00000593008 ELP3Q9H9T3 547 aa11.58□□□□□ -0.56
DDX39A-220ENST00000593008 SAP30BPQ9UHR5 308 aaKnown RBP11.58□□□□□ -0.56
DDX39A-220ENST00000593008 TAF6LQ9Y6J9 622 aa11.58□□□□□ -0.56
DDX39A-220ENST00000593008 TRPA1O75762 1119 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 ZFYP08048 801 aaPredicted RBP11.57□□□□□ -0.56
DDX39A-220ENST00000593008 PPP4CP60510 307 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 MCMDC2Q4G0Z9 681 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 SPRYD7Q5W111 196 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 SH3BP5LQ7L8J4 393 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 ANKRD13AQ8IZ07 590 aa11.57□□□□□ -0.56
DDX39A-220ENST00000593008 TGFBRAP1Q8WUH2 860 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms