RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 RBM28Q9NW13 759 aaKnown RBP14.37□□□□□ -0.11
DNMT1-228ENST00000592705 BICDL2A1A5D9 508 aa14.36□□□□□ -0.11
DNMT1-228ENST00000592705 IQUBQ8NA54 791 aa14.36□□□□□ -0.11
DNMT1-228ENST00000592705 ITGA6P23229 1130 aa14.36□□□□□ -0.11
DNMT1-228ENST00000592705 SPECC1Q5M775 1068 aa14.36□□□□□ -0.11
DNMT1-228ENST00000592705 USP44Q9H0E7 712 aa14.36□□□□□ -0.11
DNMT1-228ENST00000592705 ANKRD62A6NC57 917 aa14.36□□□□□ -0.11
DNMT1-228ENST00000592705 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
DNMT1-228ENST00000592705 ASIC1P78348 528 aa14.36□□□□□ -0.11
DNMT1-228ENST00000592705 HEATR3Q7Z4Q2 680 aa14.36□□□□□ -0.11
DNMT1-228ENST00000592705 AS3MTQ9HBK9 375 aa14.36□□□□□ -0.11
DNMT1-228ENST00000592705 AKR1B15C9JRZ8 316 aaPredicted RBP14.36□□□□□ -0.11
DNMT1-228ENST00000592705 KARSQ15046 597 aaKnown RBP14.36□□□□□ -0.11
DNMT1-228ENST00000592705 TIMM10P62072 90 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 KIF5AQ12840 1032 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 TAF12Q16514 161 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 ZNF569Q5MCW4 686 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 GPT2Q8TD30 523 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 UBXN1Q04323 297 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 ME3Q16798 604 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 GIMAP7Q8NHV1 300 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 KLHDC4Q8TBB5 520 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 APPBP2Q92624 585 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 OSBPL3Q9H4L5 887 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 LZTFL1Q9NQ48 299 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 SPATA31A6Q5VVP1 1343 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.35□□□□□ -0.11
DNMT1-228ENST00000592705 RXRAP19793 462 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 STX17P56962 302 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 GCKRQ14397 625 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 CC2D2BQ6DHV5 1058 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 C6orf50Q9HD87 102 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 OPA1O60313 960 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 CCDC172P0C7W6 258 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 NLRP12P59046 1061 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 FERMT2Q96AC1 680 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 PALD1Q9ULE6 856 aa14.35□□□□□ -0.11
DNMT1-228ENST00000592705 CUTAO60888 179 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 ATP5JP18859 108 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 FANCCQ00597 558 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 SMC1AQ14683 1233 aaKnown RBP14.34□□□□□ -0.11
DNMT1-228ENST00000592705 USPL1Q5W0Q7 1092 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 PRKAG2Q9UGJ0 569 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 KCNH3Q9ULD8 1083 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 ANGEL1Q9UNK9 670 aaKnown RBP14.34□□□□□ -0.11
DNMT1-228ENST00000592705 CCDC93Q567U6 631 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 GAS2L3Q86XJ1 694 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 BICD1Q96G01 975 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 NCOA5Q9HCD5 579 aaKnown RBP14.34□□□□□ -0.11
DNMT1-228ENST00000592705 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
DNMT1-228ENST00000592705 STAP2Q9UGK3 403 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 WDR17Q8IZU2 1322 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 DEXIO95424 95 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 TUBB2AQ13885 445 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 C17orf53Q8N3J3 647 aaPredicted RBP14.34□□□□□ -0.11
DNMT1-228ENST00000592705 TUBB2BQ9BVA1 445 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 ZBTB7AO95365 584 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 ATP2B4P23634 1241 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 NAPAP54920 295 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 PUM3Q15397 648 aaKnown RBP14.34□□□□□ -0.11
DNMT1-228ENST00000592705 DSCC1Q9BVC3 393 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 ZSWIM6Q9HCJ5 1215 aa14.34□□□□□ -0.11
DNMT1-228ENST00000592705 PKP1Q13835 747 aa14.33□□□□□ -0.11
DNMT1-228ENST00000592705 TMC4Q7Z404 712 aa14.33□□□□□ -0.11
DNMT1-228ENST00000592705 GTF3C6Q969F1 213 aa14.33□□□□□ -0.11
DNMT1-228ENST00000592705 CCDC42Q96M95 316 aa14.33□□□□□ -0.11
DNMT1-228ENST00000592705 GJD4Q96KN9 370 aaPredicted RBP14.33□□□□□ -0.12
DNMT1-228ENST00000592705 SPAG5Q96R06 1193 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 PIM2Q9P1W9 311 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 LUC7L2Q9Y383 392 aaKnown RBP14.33□□□□□ -0.12
DNMT1-228ENST00000592705 TBCAO75347 108 aaKnown RBP14.33□□□□□ -0.12
DNMT1-228ENST00000592705 EZRP15311 586 aaKnown RBP14.33□□□□□ -0.12
DNMT1-228ENST00000592705 PLCD3Q8N3E9 789 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 PREX2Q70Z35 1606 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 GSTTP1A0A1W2PQM5 241 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 GRIN3BO60391 1043 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 MBD4O95243 580 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 EVCP57679 992 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 ARMC9Q7Z3E5 817 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 APBB1IPQ7Z5R6 666 aaPredicted RBP14.33□□□□□ -0.12
DNMT1-228ENST00000592705 XAGE2Q96GT9 111 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 ZNF496Q96IT1 587 aaPredicted RBP14.33□□□□□ -0.12
DNMT1-228ENST00000592705 PLCD4Q9BRC7 762 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 GUCA1BQ9UMX6 200 aa14.33□□□□□ -0.12
DNMT1-228ENST00000592705 ZBED4O75132 1171 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 ZNF202O95125 648 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 SERPINB2P05120 415 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 MLH3Q9UHC1 1453 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 BACH1O14867 736 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 PPP2R3AQ06190 1150 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 PRPF4BQ13523 1007 aaKnown RBP14.32□□□□□ -0.12
DNMT1-228ENST00000592705 TRIM14Q14142 442 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 MIGA1Q8NAN2 632 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 TEKT1Q969V4 418 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 SELENOOQ9BVL4 669 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 INCENPQ9NQS7 918 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 PUF60Q9UHX1 559 aaKnown RBP14.32□□□□□ -0.12
DNMT1-228ENST00000592705 MTMR6Q9Y217 621 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 KDRP35968 1356 aa14.32□□□□□ -0.12
DNMT1-228ENST00000592705 ATP7BP35670 1465 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms