RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 HMGB1P09429 215 aaKnown RBP9.33□□□□□ -0.92
VMP1-215ENST00000592619 SELPP16109 830 aa9.33□□□□□ -0.92
VMP1-215ENST00000592619 MAOBP27338 520 aa9.33□□□□□ -0.92
VMP1-215ENST00000592619 KRT76Q01546 638 aa9.33□□□□□ -0.92
VMP1-215ENST00000592619 FBXW10Q5XX13 1052 aa9.33□□□□□ -0.92
VMP1-215ENST00000592619 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.33□□□□□ -0.92
VMP1-215ENST00000592619 GALNT6Q8NCL4 622 aa9.33□□□□□ -0.92
VMP1-215ENST00000592619 BTBD6Q96KE9 485 aa9.33□□□□□ -0.92
VMP1-215ENST00000592619 PCDHA4Q9UN74 947 aa9.33□□□□□ -0.92
VMP1-215ENST00000592619 ERBB4Q15303 1308 aa9.32□□□□□ -0.92
VMP1-215ENST00000592619 CASP7P55210 303 aa9.32□□□□□ -0.92
VMP1-215ENST00000592619 SDE2Q6IQ49 451 aa9.32□□□□□ -0.92
VMP1-215ENST00000592619 IRF7Q92985 503 aa9.32□□□□□ -0.92
VMP1-215ENST00000592619 KLHDC7BQ96G42 594 aa9.32□□□□□ -0.92
VMP1-215ENST00000592619 CCDC86Q9H6F5 360 aaKnown RBP9.32□□□□□ -0.92
VMP1-215ENST00000592619 ECEL1O95672 775 aa9.31□□□□□ -0.92
VMP1-215ENST00000592619 SLURP2P0DP57 97 aa9.31□□□□□ -0.92
VMP1-215ENST00000592619 SETDB1Q15047 1291 aa9.31□□□□□ -0.92
VMP1-215ENST00000592619 LRRFIP1Q32MZ4 808 aaKnown RBP9.31□□□□□ -0.92
VMP1-215ENST00000592619 HP1BP3Q5SSJ5 553 aaPredicted RBP9.31□□□□□ -0.92
VMP1-215ENST00000592619 C8orf86Q6ZUL3 223 aa9.31□□□□□ -0.92
VMP1-215ENST00000592619 LSRQ86X29 649 aaPredicted RBP9.31□□□□□ -0.92
VMP1-215ENST00000592619 ACSBG1Q96GR2 724 aa9.31□□□□□ -0.92
VMP1-215ENST00000592619 ZC3H12CQ9C0D7 883 aaKnown RBP9.31□□□□□ -0.92
VMP1-215ENST00000592619 CCDC113Q9H0I3 377 aa9.31□□□□□ -0.92
VMP1-215ENST00000592619 MSRB2Q9Y3D2 182 aa9.31□□□□□ -0.92
VMP1-215ENST00000592619 MEIS3P2A8K0S8 358 aa9.3□□□□□ -0.92
VMP1-215ENST00000592619 ZNF862O60290 1169 aa9.3□□□□□ -0.92
VMP1-215ENST00000592619 HSP90B1P14625 803 aaKnown RBP9.3□□□□□ -0.92
VMP1-215ENST00000592619 RASA3Q14644 834 aa9.3□□□□□ -0.92
VMP1-215ENST00000592619 KIF4BQ2VIQ3 1234 aa9.3□□□□□ -0.92
VMP1-215ENST00000592619 HDXQ7Z353 690 aa9.3□□□□□ -0.92
VMP1-215ENST00000592619 NLGN1Q8N2Q7 840 aa9.3□□□□□ -0.92
VMP1-215ENST00000592619 C19orf47Q8N9M1 422 aaKnown RBP9.3□□□□□ -0.92
VMP1-215ENST00000592619 SRPK1Q96SB4 655 aaKnown RBP9.3□□□□□ -0.92
VMP1-215ENST00000592619 ACTR10Q9NZ32 417 aa9.3□□□□□ -0.92
VMP1-215ENST00000592619 SYNGAP1Q96PV0 1343 aa9.3□□□□□ -0.92
VMP1-215ENST00000592619 GRIN3BO60391 1043 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 BCRP11274 1271 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 NID1P14543 1247 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 CDK8P49336 464 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 COL9A3Q14050 684 aaPredicted RBP9.29□□□□□ -0.92
VMP1-215ENST00000592619 INPP5AQ14642 412 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 WIPI1Q5MNZ9 446 aaPredicted RBP9.29□□□□□ -0.92
VMP1-215ENST00000592619 LRFN4Q6PJG9 635 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 JAZF1Q86VZ6 243 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 DCAF11Q8TEB1 546 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 PLPPR2Q96GM1 343 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 DEPDC7Q96QD5 511 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 CARD10Q9BWT7 1032 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 SNTG2Q9NY99 539 aa9.29□□□□□ -0.92
VMP1-215ENST00000592619 HTR3BO95264 441 aa9.28□□□□□ -0.92
VMP1-215ENST00000592619 CTSBP07858 339 aa9.28□□□□□ -0.92
VMP1-215ENST00000592619 DDR2Q16832 855 aa9.28□□□□□ -0.92
VMP1-215ENST00000592619 EGFLAMQ63HQ2 1017 aa9.28□□□□□ -0.92
VMP1-215ENST00000592619 CYFIP1Q7L576 1253 aa9.28□□□□□ -0.92
VMP1-215ENST00000592619 DTWD1Q8N5C7 304 aa9.28□□□□□ -0.92
VMP1-215ENST00000592619 CELF2-AS1Q8N7Q2 184 aa9.28□□□□□ -0.92
VMP1-215ENST00000592619 GALNT11Q8NCW6 608 aa9.28□□□□□ -0.92
VMP1-215ENST00000592619 TM9SF2Q99805 663 aa9.28□□□□□ -0.92
VMP1-215ENST00000592619 LOC100289279A0A1B0GTE1 492 aa9.27□□□□□ -0.93
VMP1-215ENST00000592619 SHISA8B8ZZ34 492 aa9.27□□□□□ -0.93
VMP1-215ENST00000592619 PDE3AQ14432 1141 aa9.27□□□□□ -0.93
VMP1-215ENST00000592619 FXNQ16595 210 aa9.27□□□□□ -0.93
VMP1-215ENST00000592619 TAB3Q8N5C8 712 aaPredicted RBP9.27□□□□□ -0.93
VMP1-215ENST00000592619 FAM221BA6H8Z2 402 aa9.26□□□□□ -0.93
VMP1-215ENST00000592619 NCLP19338 710 aaKnown RBP9.26□□□□□ -0.93
VMP1-215ENST00000592619 CD68P34810 354 aaPredicted RBP9.26□□□□□ -0.93
VMP1-215ENST00000592619 MLECQ14165 292 aa9.26□□□□□ -0.93
VMP1-215ENST00000592619 ZC3H12AQ5D1E8 599 aaKnown RBP9.26□□□□□ -0.93
VMP1-215ENST00000592619 TMEM201Q5SNT2 666 aa9.26□□□□□ -0.93
VMP1-215ENST00000592619 DMRTC2Q8IXT2 367 aaPredicted RBP9.26□□□□□ -0.93
VMP1-215ENST00000592619 TMEM40Q8WWA1 233 aa9.26□□□□□ -0.93
VMP1-215ENST00000592619 WDR89Q96FK6 387 aaPredicted RBP9.26□□□□□ -0.93
VMP1-215ENST00000592619 TNKS2Q9H2K2 1166 aa9.26□□□□□ -0.93
VMP1-215ENST00000592619 MRPL42Q9Y6G3 142 aaKnown RBP9.26□□□□□ -0.93
VMP1-215ENST00000592619 SLFN14P0C7P3 912 aa9.25□□□□□ -0.93
VMP1-215ENST00000592619 LIG1P18858 919 aa9.25□□□□□ -0.93
VMP1-215ENST00000592619 NLRP12P59046 1061 aa9.25□□□□□ -0.93
VMP1-215ENST00000592619 RING1Q06587 406 aa9.25□□□□□ -0.93
VMP1-215ENST00000592619 PDE4BQ07343 736 aa9.25□□□□□ -0.93
VMP1-215ENST00000592619 INTS3Q68E01 1043 aaKnown RBP9.25□□□□□ -0.93
VMP1-215ENST00000592619 ELMO3Q96BJ8 720 aa9.25□□□□□ -0.93
VMP1-215ENST00000592619 USP26Q9BXU7 913 aa9.25□□□□□ -0.93
VMP1-215ENST00000592619 GMIPQ9P107 970 aa9.25□□□□□ -0.93
VMP1-215ENST00000592619 PCDHGC5Q9Y5F6 944 aa9.25□□□□□ -0.93
VMP1-215ENST00000592619 CORINQ9Y5Q5 1042 aa9.25□□□□□ -0.93
VMP1-215ENST00000592619 ADAM11O75078 769 aa9.24□□□□□ -0.93
VMP1-215ENST00000592619 DEAF1O75398 565 aaPredicted RBP9.24□□□□□ -0.93
VMP1-215ENST00000592619 GUCY2CP25092 1073 aa9.24□□□□□ -0.93
VMP1-215ENST00000592619 HSD3B2P26439 372 aa9.24□□□□□ -0.93
VMP1-215ENST00000592619 ANTXR1Q9H6X2 564 aa9.24□□□□□ -0.93
VMP1-215ENST00000592619 REV1Q9UBZ9 1251 aa9.24□□□□□ -0.93
VMP1-215ENST00000592619 ADAM30Q9UKF2 790 aa9.24□□□□□ -0.93
VMP1-215ENST00000592619 A0A1W2PQH9 124 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 ANKRD62A6NC57 917 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 ENPP3O14638 875 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 AOC2O75106 756 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 DLGAP3O95886 979 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 CELA2BP08218 269 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms