RNA–Protein interactions for RNA: ENST00000592442.1

LAMA3-213, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-213ENST00000592442 PANK3Q9H999 370 aa6.5□□□□□ -1.37
LAMA3-213ENST00000592442 JPH1Q9HDC5 661 aaPredicted RBP6.5□□□□□ -1.37
LAMA3-213ENST00000592442 KANSL3Q9P2N6 904 aa6.5□□□□□ -1.37
LAMA3-213ENST00000592442 MKL2Q9ULH7 1088 aa6.5□□□□□ -1.37
LAMA3-213ENST00000592442 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
LAMA3-213ENST00000592442 EDC4Q6P2E9 1401 aaKnown RBP6.5□□□□□ -1.37
LAMA3-213ENST00000592442 CGNL1Q0VF96 1302 aa6.5□□□□□ -1.37
LAMA3-213ENST00000592442 A0A1W2PP64 1363 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 J3QW42 95 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 PIK3R2O00459 728 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 LILRB5O75023 590 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 RGS9O75916 674 aaPredicted RBP6.49□□□□□ -1.37
LAMA3-213ENST00000592442 ALBP02768 609 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 SOX18P35713 384 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 EVA1CP58658 441 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 HYAL2Q12891 473 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 BEND7Q8N7W2 519 aaPredicted RBP6.49□□□□□ -1.37
LAMA3-213ENST00000592442 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 SNX29Q8TEQ0 813 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 DCTN4Q9UJW0 460 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 NAGPAQ9UK23 515 aa6.49□□□□□ -1.37
LAMA3-213ENST00000592442 COL16A1Q07092 1604 aaPredicted RBP6.49□□□□□ -1.37
LAMA3-213ENST00000592442 CCDC7Q96M83 1385 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 LOC102724428A0A0B4J2F2 783 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 ZBTB42B2RXF5 422 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 RNF225M0QZC1 329 aaPredicted RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 TNFRSF21O75509 655 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 CYP2E1P05181 493 aaPredicted RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 SIK1P57059 783 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 ZC3H6P61129 1189 aaKnown RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 SNRPNP63162 240 aaKnown RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 CNGB1Q14028 1251 aaPredicted RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 ECM1Q16610 540 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 ZNF772Q68DY9 489 aaPredicted RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 NME9Q86XW9 330 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 C1orf127Q8N9H9 656 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 SMG9Q9H0W8 520 aaKnown RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 PRDM11Q9NQV5 511 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 FOXD3Q9UJU5 478 aaPredicted RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 CCDC9Q9Y3X0 531 aaKnown RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 RGPD8O14715 1765 aaPredicted RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 CPSF1Q10570 1443 aaKnown RBP6.48□□□□□ -1.37
LAMA3-213ENST00000592442 NSD3Q9BZ95 1437 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 TOPAZ1Q8N9V7 1692 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 CNTNAP5Q8WYK1 1306 aa6.48□□□□□ -1.37
LAMA3-213ENST00000592442 GCP02774 474 aa6.47□□□□□ -1.37
LAMA3-213ENST00000592442 NEFLP07196 543 aa6.47□□□□□ -1.37
LAMA3-213ENST00000592442 DGKGP49619 791 aa6.47□□□□□ -1.37
LAMA3-213ENST00000592442 PERM1Q5SV97 790 aa6.47□□□□□ -1.37
LAMA3-213ENST00000592442 XKR5Q6UX68 686 aa6.47□□□□□ -1.37
LAMA3-213ENST00000592442 MORC1Q86VD1 984 aa6.47□□□□□ -1.37
LAMA3-213ENST00000592442 CITED4Q96RK1 184 aa6.47□□□□□ -1.37
LAMA3-213ENST00000592442 GZF1Q9H116 711 aaPredicted RBP6.47□□□□□ -1.37
LAMA3-213ENST00000592442 CNTN3Q9P232 1028 aa6.47□□□□□ -1.37
LAMA3-213ENST00000592442 USP21Q9UK80 565 aa6.47□□□□□ -1.37
LAMA3-213ENST00000592442 WASHC2AQ641Q2 1341 aa6.47□□□□□ -1.37
LAMA3-213ENST00000592442 GNB5O14775 395 aa6.46□□□□□ -1.38
LAMA3-213ENST00000592442 AMPHP49418 695 aa6.46□□□□□ -1.38
LAMA3-213ENST00000592442 GDF6Q6KF10 455 aaPredicted RBP6.46□□□□□ -1.38
LAMA3-213ENST00000592442 C8orf86Q6ZUL3 223 aa6.46□□□□□ -1.38
LAMA3-213ENST00000592442 SND1Q7KZF4 910 aaKnown RBP eCLIP6.46□□□□□ -1.38
LAMA3-213ENST00000592442 ZSCAN29Q8IWY8 852 aaPredicted RBP6.46□□□□□ -1.38
LAMA3-213ENST00000592442 PMEPA1Q969W9 287 aa6.46□□□□□ -1.38
LAMA3-213ENST00000592442 PLD4Q96BZ4 506 aa6.46□□□□□ -1.38
LAMA3-213ENST00000592442 DMRTB1Q96MA1 342 aa6.46□□□□□ -1.38
LAMA3-213ENST00000592442 MDFIQ99750 246 aa6.46□□□□□ -1.38
LAMA3-213ENST00000592442 STARD13Q9Y3M8 1113 aa6.46□□□□□ -1.38
LAMA3-213ENST00000592442 AFF2P51816 1311 aa6.46□□□□□ -1.38
LAMA3-213ENST00000592442 SHPRHQ149N8 1683 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 USP31Q70CQ4 1352 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 SSH2Q76I76 1423 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 FAM177BA6PVY3 158 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 EREGO14944 169 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 FYB1O15117 783 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 IRS1P35568 1242 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 DDX10Q13206 875 aaKnown RBP6.45□□□□□ -1.38
LAMA3-213ENST00000592442 CHRNA2Q15822 529 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 COL13A1Q5TAT6 717 aaPredicted RBP6.45□□□□□ -1.38
LAMA3-213ENST00000592442 TMC7Q7Z402 723 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 LPIN3Q9BQK8 851 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 RBCK1Q9BYM8 510 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 NIF3L1Q9GZT8 377 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 TRPC5Q9UL62 973 aaPredicted RBP6.45□□□□□ -1.38
LAMA3-213ENST00000592442 CD163L1Q9NR16 1453 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 USP19O94966 1318 aa6.45□□□□□ -1.38
LAMA3-213ENST00000592442 NSD2O96028 1365 aa6.44□□□□□ -1.38
LAMA3-213ENST00000592442 KIAA0232Q92628 1395 aa6.44□□□□□ -1.38
LAMA3-213ENST00000592442 LRP5O75197 1615 aa6.44□□□□□ -1.38
LAMA3-213ENST00000592442 FAM83GA6ND36 823 aa6.44□□□□□ -1.38
LAMA3-213ENST00000592442 SPDYE3A6NKU9 549 aa6.44□□□□□ -1.38
LAMA3-213ENST00000592442 GPR182O15218 404 aa6.44□□□□□ -1.38
LAMA3-213ENST00000592442 PPM1GO15355 546 aaPredicted RBP6.44□□□□□ -1.38
LAMA3-213ENST00000592442 SMNDC1O75940 238 aaKnown RBP eCLIP6.44□□□□□ -1.38
LAMA3-213ENST00000592442 EDN3P14138 238 aa6.44□□□□□ -1.38
LAMA3-213ENST00000592442 TNNT2P45379 298 aaPredicted RBP6.44□□□□□ -1.38
LAMA3-213ENST00000592442 ATP11AP98196 1134 aa6.44□□□□□ -1.38
LAMA3-213ENST00000592442 CC2D1BQ5T0F9 858 aaKnown RBP6.44□□□□□ -1.38
LAMA3-213ENST00000592442 CEP135Q66GS9 1140 aa6.44□□□□□ -1.38
LAMA3-213ENST00000592442 UNC5CLQ8IV45 518 aa6.44□□□□□ -1.38
LAMA3-213ENST00000592442 FAM129BQ96TA1 746 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms