RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 MAP3K10Q02779 954 aa22.78■■□□□ 1.24
CIRBP-238ENST00000592412 PRRT2Q7Z6L0 340 aaPredicted RBP22.78■■□□□ 1.24
CIRBP-238ENST00000592412 SCYL3Q8IZE3 742 aa22.78■■□□□ 1.24
CIRBP-238ENST00000592412 DDX4Q9NQI0 724 aaKnown RBP22.78■■□□□ 1.24
CIRBP-238ENST00000592412 SMC4Q9NTJ3 1288 aa22.78■■□□□ 1.24
CIRBP-238ENST00000592412 GNL3LQ9NVN8 582 aaKnown RBP22.78■■□□□ 1.24
CIRBP-238ENST00000592412 GABRQQ9UN88 632 aa22.78■■□□□ 1.24
CIRBP-238ENST00000592412 PTPRFP10586 1907 aa22.78■■□□□ 1.24
CIRBP-238ENST00000592412 PHIPQ8WWQ0 1821 aa22.78■■□□□ 1.24
CIRBP-238ENST00000592412 ENTPD3O75355 529 aa22.77■■□□□ 1.24
CIRBP-238ENST00000592412 HOXD10P28358 340 aa22.77■■□□□ 1.24
CIRBP-238ENST00000592412 IL15P40933 162 aaPredicted RBP22.77■■□□□ 1.24
CIRBP-238ENST00000592412 RASGRF1Q13972 1273 aa22.77■■□□□ 1.24
CIRBP-238ENST00000592412 CCDC102BQ68D86 513 aa22.77■■□□□ 1.24
CIRBP-238ENST00000592412 AFG3L2Q9Y4W6 797 aa22.77■■□□□ 1.24
CIRBP-238ENST00000592412 LRRFIP2Q9Y608 721 aaKnown RBP22.77■■□□□ 1.24
CIRBP-238ENST00000592412 ZHX2Q9Y6X8 837 aa22.77■■□□□ 1.24
CIRBP-238ENST00000592412 DDTLA6NHG4 134 aaPredicted RBP22.76■■□□□ 1.23
CIRBP-238ENST00000592412 GJB1P08034 283 aa22.76■■□□□ 1.23
CIRBP-238ENST00000592412 CHRDL2Q6WN34 429 aa22.76■■□□□ 1.23
CIRBP-238ENST00000592412 TRMT2AQ8IZ69 625 aaKnown RBP22.76■■□□□ 1.23
CIRBP-238ENST00000592412 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.76■■□□□ 1.23
CIRBP-238ENST00000592412 DOCK1Q14185 1865 aa22.75■■□□□ 1.23
CIRBP-238ENST00000592412 FCGRTP55899 365 aa22.75■■□□□ 1.23
CIRBP-238ENST00000592412 COPRSQ9NQ92 184 aa22.75■■□□□ 1.23
CIRBP-238ENST00000592412 NKX2-3Q8TAU0 364 aa22.74■■□□□ 1.23
CIRBP-238ENST00000592412 ZNF384Q8TF68 577 aa22.74■■□□□ 1.23
CIRBP-238ENST00000592412 FAM163AQ96GL9 167 aaPredicted RBP22.74■■□□□ 1.23
CIRBP-238ENST00000592412 RNF208Q9H0X6 261 aa22.74■■□□□ 1.23
CIRBP-238ENST00000592412 NOB1Q9ULX3 412 aaKnown RBP22.74■■□□□ 1.23
CIRBP-238ENST00000592412 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.74■■□□□ 1.23
CIRBP-238ENST00000592412 TIMM10P62072 90 aa22.73■■□□□ 1.23
CIRBP-238ENST00000592412 FASTKD5Q7L8L6 764 aaKnown RBP22.73■■□□□ 1.23
CIRBP-238ENST00000592412 CCDC84Q86UT8 332 aaPredicted RBP22.73■■□□□ 1.23
CIRBP-238ENST00000592412 MEIS3Q99687 375 aa22.73■■□□□ 1.23
CIRBP-238ENST00000592412 UNC93B1Q9H1C4 597 aa22.73■■□□□ 1.23
CIRBP-238ENST00000592412 PICK1Q9NRD5 415 aa22.73■■□□□ 1.23
CIRBP-238ENST00000592412 RBM27Q9P2N5 1060 aaKnown RBP22.73■■□□□ 1.23
CIRBP-238ENST00000592412 PDS5AQ29RF7 1337 aaKnown RBP22.73■■□□□ 1.23
CIRBP-238ENST00000592412 GADL1Q6ZQY3 521 aa22.72■■□□□ 1.23
CIRBP-238ENST00000592412 ZGPATQ8N5A5 531 aaKnown RBP22.72■■□□□ 1.23
CIRBP-238ENST00000592412 SLAIN1Q8ND83 568 aa22.72■■□□□ 1.23
CIRBP-238ENST00000592412 U2AF1L4Q8WU68 220 aaKnown RBP22.72■■□□□ 1.23
CIRBP-238ENST00000592412 DPF3Q92784 378 aa22.72■■□□□ 1.23
CIRBP-238ENST00000592412 PRO3102Q9H379 93 aa22.72■■□□□ 1.23
CIRBP-238ENST00000592412 SLC45A1Q9Y2W3 748 aa22.72■■□□□ 1.23
CIRBP-238ENST00000592412 BTDP43251 543 aa22.71■■□□□ 1.23
CIRBP-238ENST00000592412 RHBDL3P58872 404 aa22.71■■□□□ 1.23
CIRBP-238ENST00000592412 DZIP1Q86YF9 867 aaKnown RBP22.71■■□□□ 1.23
CIRBP-238ENST00000592412 BIN2Q9UBW5 565 aaPredicted RBP22.71■■□□□ 1.23
CIRBP-238ENST00000592412 ABCF2Q9UG63 623 aa22.71■■□□□ 1.23
CIRBP-238ENST00000592412 MROH7-TTC4A0A0A0MT08 1334 aa22.71■■□□□ 1.23
CIRBP-238ENST00000592412 CTNND1O60716 968 aaKnown RBP22.7■■□□□ 1.22
CIRBP-238ENST00000592412 ELNP15502 786 aa22.7■■□□□ 1.22
CIRBP-238ENST00000592412 FLT3LGP49771 235 aa22.7■■□□□ 1.22
CIRBP-238ENST00000592412 UBXN2AP68543 259 aa22.7■■□□□ 1.22
CIRBP-238ENST00000592412 PICALMQ13492 652 aa22.7■■□□□ 1.22
CIRBP-238ENST00000592412 ZSCAN29Q8IWY8 852 aaPredicted RBP22.7■■□□□ 1.22
CIRBP-238ENST00000592412 A0A1B0GUL7 405 aa22.69■■□□□ 1.22
CIRBP-238ENST00000592412 TRIM75PA6NK02 468 aa22.69■■□□□ 1.22
CIRBP-238ENST00000592412 ADCY3O60266 1144 aa22.69■■□□□ 1.22
CIRBP-238ENST00000592412 MECOMQ03112 1051 aa22.69■■□□□ 1.22
CIRBP-238ENST00000592412 XAGE2Q96GT9 111 aa22.69■■□□□ 1.22
CIRBP-238ENST00000592412 COL6A3P12111 3177 aa22.68■■□□□ 1.22
CIRBP-238ENST00000592412 GPR75-ASB3A0A0A6YYF3 556 aa22.68■■□□□ 1.22
CIRBP-238ENST00000592412 FAM196BA6NMK8 535 aa22.68■■□□□ 1.22
CIRBP-238ENST00000592412 SGPL1O95470 568 aa22.68■■□□□ 1.22
CIRBP-238ENST00000592412 INHAP05111 366 aa22.68■■□□□ 1.22
CIRBP-238ENST00000592412 TFCP2Q12800 502 aa22.68■■□□□ 1.22
CIRBP-238ENST00000592412 TREML2Q5T2D2 321 aa22.68■■□□□ 1.22
CIRBP-238ENST00000592412 FARP2O94887 1054 aaPredicted RBP22.67■■□□□ 1.22
CIRBP-238ENST00000592412 IRF5Q13568 498 aa22.67■■□□□ 1.22
CIRBP-238ENST00000592412 PI16Q6UXB8 463 aa22.67■■□□□ 1.22
CIRBP-238ENST00000592412 PXYLP1Q8TE99 480 aa22.67■■□□□ 1.22
CIRBP-238ENST00000592412 HTATIP2Q9BUP3 242 aa22.67■■□□□ 1.22
CIRBP-238ENST00000592412 API5Q9BZZ5 524 aaKnown RBP22.67■■□□□ 1.22
CIRBP-238ENST00000592412 AGTPBP1Q9UPW5 1226 aa22.67■■□□□ 1.22
CIRBP-238ENST00000592412 LOC285556D6RIA3 1793 aa22.66■■□□□ 1.22
CIRBP-238ENST00000592412 DOCK3Q8IZD9 2030 aa22.66■■□□□ 1.22
CIRBP-238ENST00000592412 TNPO2O14787 897 aaKnown RBP22.66■■□□□ 1.22
CIRBP-238ENST00000592412 SLF2Q8IX21 1173 aa22.66■■□□□ 1.22
CIRBP-238ENST00000592412 HMG20BQ9P0W2 317 aa22.66■■□□□ 1.22
CIRBP-238ENST00000592412 ZBTB7BO15156 539 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-238ENST00000592412 TBC1D12O60347 775 aa22.65■■□□□ 1.22
CIRBP-238ENST00000592412 NPM3O75607 178 aaKnown RBP22.65■■□□□ 1.22
CIRBP-238ENST00000592412 CT47B1P0C2W7 299 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-238ENST00000592412 MTX1Q13505 466 aa22.65■■□□□ 1.22
CIRBP-238ENST00000592412 RRP1BQ14684 758 aaKnown RBP22.65■■□□□ 1.22
CIRBP-238ENST00000592412 SPTY2D1Q68D10 685 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-238ENST00000592412 ANKRD13CQ8N6S4 541 aa22.65■■□□□ 1.22
CIRBP-238ENST00000592412 SMCR8Q8TEV9 937 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-238ENST00000592412 PAK6Q9NQU5 681 aaPredicted RBP22.65■■□□□ 1.22
CIRBP-238ENST00000592412 SRGAP3O43295 1099 aa22.64■■□□□ 1.21
CIRBP-238ENST00000592412 ERICH6Q7L0X2 663 aa22.64■■□□□ 1.21
CIRBP-238ENST00000592412 NSUN4Q96CB9 384 aaKnown RBP22.64■■□□□ 1.21
CIRBP-238ENST00000592412 COL2A1P02458 1487 aaPredicted RBP22.64■■□□□ 1.21
CIRBP-238ENST00000592412 RARSP54136 660 aaKnown RBP22.63■■□□□ 1.21
CIRBP-238ENST00000592412 MVPQ14764 893 aaKnown RBP22.63■■□□□ 1.21
CIRBP-238ENST00000592412 TBC1D9Q6ZT07 1266 aa22.63■■□□□ 1.21
CIRBP-238ENST00000592412 DEFB118Q96PH6 123 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms