RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 A0A1W2PQ64 194 aa18.34■□□□□ 0.53
MBD1-227ENST00000592060 A0A1W2PQD8 194 aa18.34■□□□□ 0.53
MBD1-227ENST00000592060 TM4SF1P30408 202 aa18.34■□□□□ 0.53
MBD1-227ENST00000592060 ME1P48163 572 aa18.34■□□□□ 0.53
MBD1-227ENST00000592060 FAM160A1Q05DH4 1040 aa18.34■□□□□ 0.53
MBD1-227ENST00000592060 FSIP1Q8NA03 581 aa18.34■□□□□ 0.53
MBD1-227ENST00000592060 SDR42E1Q8WUS8 393 aa18.34■□□□□ 0.53
MBD1-227ENST00000592060 PHKBQ93100 1093 aa18.34■□□□□ 0.53
MBD1-227ENST00000592060 CBX8Q9HC52 389 aa18.34■□□□□ 0.53
MBD1-227ENST00000592060 CCDC88AQ3V6T2 1871 aa18.34■□□□□ 0.53
MBD1-227ENST00000592060 CCDC69A6NI79 296 aa18.33■□□□□ 0.53
MBD1-227ENST00000592060 CTAGE5O15320 804 aa18.33■□□□□ 0.53
MBD1-227ENST00000592060 POLR3DP05423 398 aaPredicted RBP18.33■□□□□ 0.53
MBD1-227ENST00000592060 PTMAP06454 111 aaKnown RBP18.33■□□□□ 0.53
MBD1-227ENST00000592060 ADALQ6DHV7 355 aa18.33■□□□□ 0.53
MBD1-227ENST00000592060 TPTE2Q6XPS3 522 aa18.33■□□□□ 0.53
MBD1-227ENST00000592060 VPS37DQ86XT2 251 aa18.33■□□□□ 0.53
MBD1-227ENST00000592060 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.53
MBD1-227ENST00000592060 ANKRD2Q9GZV1 360 aa18.33■□□□□ 0.53
MBD1-227ENST00000592060 RNF41Q9H4P4 317 aaPredicted RBP18.33■□□□□ 0.53
MBD1-227ENST00000592060 SLC12A7Q9Y666 1083 aa18.33■□□□□ 0.53
MBD1-227ENST00000592060 IRS2Q9Y4H2 1338 aa18.33■□□□□ 0.53
MBD1-227ENST00000592060 ZBTB22O15209 634 aa18.33■□□□□ 0.52
MBD1-227ENST00000592060 RRP12Q5JTH9 1297 aaKnown RBP18.33■□□□□ 0.52
MBD1-227ENST00000592060 KRT40Q6A162 431 aa18.33■□□□□ 0.52
MBD1-227ENST00000592060 SASS6Q6UVJ0 657 aa18.33■□□□□ 0.52
MBD1-227ENST00000592060 KCNG4Q8TDN1 519 aa18.33■□□□□ 0.52
MBD1-227ENST00000592060 UBR3Q6ZT12 1888 aa18.32■□□□□ 0.52
MBD1-227ENST00000592060 MYH2Q9UKX2 1941 aa18.32■□□□□ 0.52
MBD1-227ENST00000592060 IARSP41252 1262 aaKnown RBP18.32■□□□□ 0.52
MBD1-227ENST00000592060 STK38Q15208 465 aa18.32■□□□□ 0.52
MBD1-227ENST00000592060 LUZP1Q86V48 1076 aa18.32■□□□□ 0.52
MBD1-227ENST00000592060 CCDC24Q8N4L8 307 aa18.32■□□□□ 0.52
MBD1-227ENST00000592060 MRPS27Q92552 414 aaKnown RBP18.32■□□□□ 0.52
MBD1-227ENST00000592060 GJD4Q96KN9 370 aaPredicted RBP18.32■□□□□ 0.52
MBD1-227ENST00000592060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
MBD1-227ENST00000592060 FMNL1O95466 1100 aaPredicted RBP18.31■□□□□ 0.52
MBD1-227ENST00000592060 IFNAR1P17181 557 aa18.31■□□□□ 0.52
MBD1-227ENST00000592060 DYNLL1P63167 89 aaKnown RBP18.31■□□□□ 0.52
MBD1-227ENST00000592060 WTAPQ15007 396 aa18.31■□□□□ 0.52
MBD1-227ENST00000592060 FMR1NBQ8N0W7 255 aaPredicted RBP18.31■□□□□ 0.52
MBD1-227ENST00000592060 TDRD7Q8NHU6 1098 aaKnown RBP18.31■□□□□ 0.52
MBD1-227ENST00000592060 BRIP1Q9BX63 1249 aa18.31■□□□□ 0.52
MBD1-227ENST00000592060 SPTLC2O15270 562 aa18.31■□□□□ 0.52
MBD1-227ENST00000592060 RCAN1P53805 252 aa18.31■□□□□ 0.52
MBD1-227ENST00000592060 SART3Q15020 963 aaKnown RBP18.31■□□□□ 0.52
MBD1-227ENST00000592060 ANO1Q5XXA6 986 aa18.31■□□□□ 0.52
MBD1-227ENST00000592060 ZKSCAN3Q9BRR0 538 aa18.31■□□□□ 0.52
MBD1-227ENST00000592060 KINO60870 393 aaKnown RBP18.3■□□□□ 0.52
MBD1-227ENST00000592060 SEC23AQ15436 765 aa18.3■□□□□ 0.52
MBD1-227ENST00000592060 NSUN4Q96CB9 384 aaKnown RBP18.3■□□□□ 0.52
MBD1-227ENST00000592060 TOMM22Q9NS69 142 aa18.3■□□□□ 0.52
MBD1-227ENST00000592060 MYH6P13533 1939 aa18.3■□□□□ 0.52
MBD1-227ENST00000592060 SMIM22K7EJ46 135 aa18.3■□□□□ 0.52
MBD1-227ENST00000592060 OFD1O75665 1012 aa18.3■□□□□ 0.52
MBD1-227ENST00000592060 CAVIN2O95810 425 aa18.3■□□□□ 0.52
MBD1-227ENST00000592060 HIBADHP31937 336 aaKnown RBP18.3■□□□□ 0.52
MBD1-227ENST00000592060 SSRP1Q08945 709 aaKnown RBP18.3■□□□□ 0.52
MBD1-227ENST00000592060 SYNE3Q6ZMZ3 975 aa18.3■□□□□ 0.52
MBD1-227ENST00000592060 DNAJC25Q9H1X3 360 aa18.3■□□□□ 0.52
MBD1-227ENST00000592060 TFCP2L1Q9NZI6 479 aa18.3■□□□□ 0.52
MBD1-227ENST00000592060 MINDY4BA8MYZ0 360 aa18.29■□□□□ 0.52
MBD1-227ENST00000592060 UBE2Q2LH0YL09 131 aa18.29■□□□□ 0.52
MBD1-227ENST00000592060 ONECUT3O60422 494 aaPredicted RBP18.29■□□□□ 0.52
MBD1-227ENST00000592060 U2AF2P26368 475 aaKnown RBP eCLIP18.29■□□□□ 0.523e-7■■□□□ 12.2
MBD1-227ENST00000592060 RTN1Q16799 776 aa18.29■□□□□ 0.52
MBD1-227ENST00000592060 STK11IPQ8N1F8 1099 aa18.29■□□□□ 0.52
MBD1-227ENST00000592060 TMTC2Q8N394 836 aa18.29■□□□□ 0.52
MBD1-227ENST00000592060 SLC26A6Q9BXS9 759 aa18.29■□□□□ 0.52
MBD1-227ENST00000592060 ERICH2A1L162 156 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 FGRP09769 529 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 MECOMQ03112 1051 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 AXDND1Q5T1B0 1012 aaPredicted RBP18.28■□□□□ 0.52
MBD1-227ENST00000592060 NBPF11Q86T75 865 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 ZNF654Q8IZM8 581 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 A0A1B0GVL5 298 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 RFC4P35249 363 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 ZNF165P49910 485 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 NDUFA8P51970 172 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 NFIXQ14938 502 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 SLC39A14Q15043 492 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 SF3A1Q15459 793 aaKnown RBP18.28■□□□□ 0.52
MBD1-227ENST00000592060 STX1AQ16623 288 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 ESR2Q92731 530 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 AFF2P51816 1311 aa18.28■□□□□ 0.52
MBD1-227ENST00000592060 TNKSO95271 1327 aa18.27■□□□□ 0.52
MBD1-227ENST00000592060 PLCB2Q00722 1185 aa18.27■□□□□ 0.52
MBD1-227ENST00000592060 TRAPPC3LQ5T215 181 aa18.27■□□□□ 0.52
MBD1-227ENST00000592060 FAM196AQ6ZSG2 479 aa18.27■□□□□ 0.52
MBD1-227ENST00000592060 C11orf57Q6ZUT1 292 aaPredicted RBP18.27■□□□□ 0.52
MBD1-227ENST00000592060 TXNRD3Q86VQ6 643 aa18.27■□□□□ 0.52
MBD1-227ENST00000592060 WASF1Q92558 559 aa18.27■□□□□ 0.52
MBD1-227ENST00000592060 UBAC1Q9BSL1 405 aa18.27■□□□□ 0.52
MBD1-227ENST00000592060 MROH7-TTC4A0A0A0MT08 1334 aa18.26■□□□□ 0.51
MBD1-227ENST00000592060 CYP2D7A0A087X1C5 515 aa18.26■□□□□ 0.51
MBD1-227ENST00000592060 GUCY1A2P33402 732 aa18.26■□□□□ 0.51
MBD1-227ENST00000592060 TRIM29Q14134 588 aa18.26■□□□□ 0.51
MBD1-227ENST00000592060 IQCB1Q15051 598 aa18.26■□□□□ 0.51
MBD1-227ENST00000592060 PTPAQ15257 358 aa18.26■□□□□ 0.51
MBD1-227ENST00000592060 CTR9Q6PD62 1173 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms