RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 NBPF3Q9H094 633 aa12.81□□□□□ -0.36
SDF2-209ENST00000591903 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.81□□□□□ -0.36
SDF2-209ENST00000591903 ZMYND8Q9ULU4 1186 aaPredicted RBP12.81□□□□□ -0.36
SDF2-209ENST00000591903 MROH5Q6ZUA9 1318 aa12.81□□□□□ -0.36
SDF2-209ENST00000591903 RPTORQ8N122 1335 aa12.81□□□□□ -0.36
SDF2-209ENST00000591903 MAGEA10P43363 369 aaPredicted RBP12.8□□□□□ -0.36
SDF2-209ENST00000591903 CHAF1AQ13111 956 aaPredicted RBP12.8□□□□□ -0.36
SDF2-209ENST00000591903 FBXO33Q7Z6M2 555 aa12.8□□□□□ -0.36
SDF2-209ENST00000591903 SMCR8Q8TEV9 937 aaPredicted RBP12.8□□□□□ -0.36
SDF2-209ENST00000591903 DIS3LQ8TF46 1054 aaKnown RBP12.8□□□□□ -0.36
SDF2-209ENST00000591903 UBE2OQ9C0C9 1292 aaKnown RBP12.8□□□□□ -0.36
SDF2-209ENST00000591903 DOCK1Q14185 1865 aa12.8□□□□□ -0.36
SDF2-209ENST00000591903 PHIPQ8WWQ0 1821 aa12.79□□□□□ -0.36
SDF2-209ENST00000591903 A0A0G2JLL6 359 aaPredicted RBP12.79□□□□□ -0.36
SDF2-209ENST00000591903 HMGCRP04035 888 aa12.79□□□□□ -0.36
SDF2-209ENST00000591903 GRIK5Q16478 980 aa12.79□□□□□ -0.36
SDF2-209ENST00000591903 PRRT2Q7Z6L0 340 aaPredicted RBP12.79□□□□□ -0.36
SDF2-209ENST00000591903 C11orf49Q9H6J7 331 aa12.79□□□□□ -0.36
SDF2-209ENST00000591903 VCANP13611 3396 aa12.79□□□□□ -0.36
SDF2-209ENST00000591903 SYN1P17600 705 aa12.78□□□□□ -0.36
SDF2-209ENST00000591903 HMX1Q9NP08 348 aaPredicted RBP12.78□□□□□ -0.36
SDF2-209ENST00000591903 PICK1Q9NRD5 415 aa12.78□□□□□ -0.36
SDF2-209ENST00000591903 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
SDF2-209ENST00000591903 GRM8O00222 908 aa12.77□□□□□ -0.37
SDF2-209ENST00000591903 SCYL3Q8IZE3 742 aa12.77□□□□□ -0.37
SDF2-209ENST00000591903 PRDM6Q9NQX0 595 aa12.77□□□□□ -0.37
SDF2-209ENST00000591903 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
SDF2-209ENST00000591903 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.37
SDF2-209ENST00000591903 COL2A1P02458 1487 aaPredicted RBP12.77□□□□□ -0.37
SDF2-209ENST00000591903 POTEB2H3BUK9 544 aa12.76□□□□□ -0.37
SDF2-209ENST00000591903 FAM110CQ1W6H9 321 aa12.76□□□□□ -0.37
SDF2-209ENST00000591903 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
SDF2-209ENST00000591903 BEND3Q5T5X7 828 aa12.76□□□□□ -0.37
SDF2-209ENST00000591903 GADL1Q6ZQY3 521 aa12.76□□□□□ -0.37
SDF2-209ENST00000591903 YTHDC1Q96MU7 727 aaKnown RBP12.76□□□□□ -0.37
SDF2-209ENST00000591903 ZHX2Q9Y6X8 837 aa12.76□□□□□ -0.37
SDF2-209ENST00000591903 KIF16BQ96L93 1317 aa12.76□□□□□ -0.37
SDF2-209ENST00000591903 LOC285556D6RIA3 1793 aa12.75□□□□□ -0.37
SDF2-209ENST00000591903 PTPRCP08575 1304 aa12.75□□□□□ -0.37
SDF2-209ENST00000591903 PTPRAP18433 802 aa12.75□□□□□ -0.37
SDF2-209ENST00000591903 RARSP54136 660 aaKnown RBP12.75□□□□□ -0.37
SDF2-209ENST00000591903 TCP10Q12799 353 aa12.75□□□□□ -0.37
SDF2-209ENST00000591903 WDR66Q8TBY9 1149 aa12.75□□□□□ -0.37
SDF2-209ENST00000591903 ARHGAP45Q92619 1136 aa12.75□□□□□ -0.37
SDF2-209ENST00000591903 GUCD1Q96NT3 240 aa12.75□□□□□ -0.37
SDF2-209ENST00000591903 C9orf78Q9NZ63 289 aaPredicted RBP12.75□□□□□ -0.37
SDF2-209ENST00000591903 OGDHLQ9ULD0 1010 aa12.75□□□□□ -0.37
SDF2-209ENST00000591903 AGTPBP1Q9UPW5 1226 aa12.75□□□□□ -0.37
SDF2-209ENST00000591903 AFG3L2Q9Y4W6 797 aa12.75□□□□□ -0.37
SDF2-209ENST00000591903 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
SDF2-209ENST00000591903 EYSQ5T1H1 3165 aa12.74□□□□□ -0.37
SDF2-209ENST00000591903 LAMA2P24043 3122 aaKnown RBP12.74□□□□□ -0.37
SDF2-209ENST00000591903 GCLCP48506 637 aaPredicted RBP12.74□□□□□ -0.37
SDF2-209ENST00000591903 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
SDF2-209ENST00000591903 ANKRD13CQ8N6S4 541 aa12.74□□□□□ -0.37
SDF2-209ENST00000591903 PUS3Q9BZE2 481 aaKnown RBP12.74□□□□□ -0.37
SDF2-209ENST00000591903 MYH2Q9UKX2 1941 aa12.74□□□□□ -0.37
SDF2-209ENST00000591903 PHF20L1A8MW92 1017 aa12.73□□□□□ -0.37
SDF2-209ENST00000591903 PDE8BO95263 885 aa12.73□□□□□ -0.37
SDF2-209ENST00000591903 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
SDF2-209ENST00000591903 ZNF697Q5TEC3 545 aa12.73□□□□□ -0.37
SDF2-209ENST00000591903 SYMPKQ92797 1274 aaKnown RBP12.73□□□□□ -0.37
SDF2-209ENST00000591903 DAGLAQ9Y4D2 1042 aa12.73□□□□□ -0.37
SDF2-209ENST00000591903 ATRNL1Q5VV63 1379 aa12.72□□□□□ -0.37
SDF2-209ENST00000591903 FRMPD3Q5JV73 1810 aa12.72□□□□□ -0.37
SDF2-209ENST00000591903 ATAD5Q96QE3 1844 aa12.72□□□□□ -0.37
SDF2-209ENST00000591903 MAST2Q6P0Q8 1798 aa12.72□□□□□ -0.37
SDF2-209ENST00000591903 PFASO15067 1338 aa12.72□□□□□ -0.37
SDF2-209ENST00000591903 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
SDF2-209ENST00000591903 ALDH1L1O75891 902 aa12.72□□□□□ -0.37
SDF2-209ENST00000591903 IFIT1P09914 478 aaKnown RBP12.72□□□□□ -0.37
SDF2-209ENST00000591903 NFIAQ12857 509 aa12.72□□□□□ -0.37
SDF2-209ENST00000591903 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
SDF2-209ENST00000591903 PROCA1Q8NCQ7 364 aaPredicted RBP12.72□□□□□ -0.37
SDF2-209ENST00000591903 SSH1Q8WYL5 1049 aa12.72□□□□□ -0.37
SDF2-209ENST00000591903 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
SDF2-209ENST00000591903 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
SDF2-209ENST00000591903 TRIM75PA6NK02 468 aa12.71□□□□□ -0.37
SDF2-209ENST00000591903 F6X3S4 739 aa12.71□□□□□ -0.37
SDF2-209ENST00000591903 IPO8O15397 1037 aaKnown RBP12.71□□□□□ -0.37
SDF2-209ENST00000591903 ENTPD3O75355 529 aa12.71□□□□□ -0.37
SDF2-209ENST00000591903 COL6A1P12109 1028 aa12.71□□□□□ -0.37
SDF2-209ENST00000591903 PABPC4Q13310 644 aaKnown RBP eCLIP12.71□□□□□ -0.37
SDF2-209ENST00000591903 PUM3Q15397 648 aaKnown RBP12.71□□□□□ -0.37
SDF2-209ENST00000591903 TRMT44Q8IYL2 757 aaKnown RBP12.71□□□□□ -0.37
SDF2-209ENST00000591903 VGLL2Q8N8G2 317 aa12.71□□□□□ -0.37
SDF2-209ENST00000591903 SMC4Q9NTJ3 1288 aa12.71□□□□□ -0.37
SDF2-209ENST00000591903 USP40Q9NVE5 1235 aa12.71□□□□□ -0.37
SDF2-209ENST00000591903 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.37
SDF2-209ENST00000591903 SPTBN5Q9NRC6 3674 aaKnown RBP12.7□□□□□ -0.38
SDF2-209ENST00000591903 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
SDF2-209ENST00000591903 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
SDF2-209ENST00000591903 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
SDF2-209ENST00000591903 MAP3K21Q5TCX8 1036 aa12.7□□□□□ -0.38
SDF2-209ENST00000591903 LBHD1Q9BQE6 289 aaPredicted RBP12.7□□□□□ -0.38
SDF2-209ENST00000591903 IDI2Q9BXS1 227 aa12.7□□□□□ -0.38
SDF2-209ENST00000591903 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
SDF2-209ENST00000591903 GJD2Q9UKL4 321 aa12.7□□□□□ -0.38
SDF2-209ENST00000591903 MS4A1P11836 297 aa12.69□□□□□ -0.38
SDF2-209ENST00000591903 XRCC5P13010 732 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms