RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
VPS4B-207ENST00000591519 CSADQ9Y600 493 aa12.97□□□□□ -0.33
VPS4B-207ENST00000591519 PDE4DIPQ5VU43 2346 aa12.96□□□□□ -0.33
VPS4B-207ENST00000591519 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
VPS4B-207ENST00000591519 SEMA3EO15041 775 aa12.96□□□□□ -0.33
VPS4B-207ENST00000591519 IL15P40933 162 aaPredicted RBP12.96□□□□□ -0.33
VPS4B-207ENST00000591519 RARSP54136 660 aaKnown RBP12.96□□□□□ -0.33
VPS4B-207ENST00000591519 CACNB3P54284 484 aa12.96□□□□□ -0.33
VPS4B-207ENST00000591519 SP3Q02447 781 aa12.96□□□□□ -0.33
VPS4B-207ENST00000591519 INTS3Q68E01 1043 aaKnown RBP12.96□□□□□ -0.33
VPS4B-207ENST00000591519 BRI3BPQ8WY22 251 aa12.96□□□□□ -0.33
VPS4B-207ENST00000591519 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
VPS4B-207ENST00000591519 TRIM17Q9Y577 477 aa12.96□□□□□ -0.33
VPS4B-207ENST00000591519 OTOFQ9HC10 1997 aa12.96□□□□□ -0.34
VPS4B-207ENST00000591519 SALL1Q9NSC2 1324 aa12.95□□□□□ -0.34
VPS4B-207ENST00000591519 C2orf72A6NCS6 295 aa12.95□□□□□ -0.34
VPS4B-207ENST00000591519 SLC34A2O95436 690 aa12.95□□□□□ -0.34
VPS4B-207ENST00000591519 ATP2B3Q16720 1220 aa12.95□□□□□ -0.34
VPS4B-207ENST00000591519 ERO1BQ86YB8 467 aa12.95□□□□□ -0.34
VPS4B-207ENST00000591519 ZNF687Q8N1G0 1237 aa12.95□□□□□ -0.34
VPS4B-207ENST00000591519 FAM151AQ8WW52 585 aa12.95□□□□□ -0.34
VPS4B-207ENST00000591519 ZCCHC17Q9NP64 241 aaKnown RBP12.95□□□□□ -0.34
VPS4B-207ENST00000591519 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
VPS4B-207ENST00000591519 PTPN22Q9Y2R2 807 aa12.95□□□□□ -0.34
VPS4B-207ENST00000591519 LRRFIP2Q9Y608 721 aaKnown RBP12.95□□□□□ -0.34
VPS4B-207ENST00000591519 SNCAIPQ9Y6H5 919 aa12.95□□□□□ -0.34
VPS4B-207ENST00000591519 RPAP1Q9BWH6 1393 aaPredicted RBP12.94□□□□□ -0.34
VPS4B-207ENST00000591519 CCL15-CCL14A0A0B4J2E2 113 aa12.94□□□□□ -0.34
VPS4B-207ENST00000591519 CCL15Q16663 113 aa12.94□□□□□ -0.34
VPS4B-207ENST00000591519 DCAF15Q66K64 600 aa12.94□□□□□ -0.34
VPS4B-207ENST00000591519 SIL1Q9H173 461 aa12.94□□□□□ -0.34
VPS4B-207ENST00000591519 ZFYVE28Q9HCC9 887 aa12.94□□□□□ -0.34
VPS4B-207ENST00000591519 ZNF112Q9UJU3 913 aa12.94□□□□□ -0.34
VPS4B-207ENST00000591519 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
VPS4B-207ENST00000591519 DAGLAQ9Y4D2 1042 aa12.94□□□□□ -0.34
VPS4B-207ENST00000591519 CETPP11597 493 aa12.93□□□□□ -0.34
VPS4B-207ENST00000591519 PRDX5P30044 214 aa12.93□□□□□ -0.34
VPS4B-207ENST00000591519 MTX1Q13505 466 aa12.93□□□□□ -0.34
VPS4B-207ENST00000591519 CDC42EP5Q6NZY7 148 aa12.93□□□□□ -0.34
VPS4B-207ENST00000591519 FAM43AQ8N2R8 423 aa12.93□□□□□ -0.34
VPS4B-207ENST00000591519 CD99L2Q8TCZ2 262 aa12.93□□□□□ -0.34
VPS4B-207ENST00000591519 ZKSCAN4Q969J2 545 aaPredicted RBP12.93□□□□□ -0.34
VPS4B-207ENST00000591519 WRNIP1Q96S55 665 aa12.93□□□□□ -0.34
VPS4B-207ENST00000591519 MEIS3Q99687 375 aa12.93□□□□□ -0.34
VPS4B-207ENST00000591519 ZNF341Q9BYN7 854 aa12.93□□□□□ -0.34
VPS4B-207ENST00000591519 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
VPS4B-207ENST00000591519 IRF6O14896 467 aa12.92□□□□□ -0.34
VPS4B-207ENST00000591519 LDHBP07195 334 aaKnown RBP12.92□□□□□ -0.34
VPS4B-207ENST00000591519 GNAI3P08754 354 aa12.92□□□□□ -0.34
VPS4B-207ENST00000591519 PHKA1P46020 1223 aa12.92□□□□□ -0.34
VPS4B-207ENST00000591519 HNRNPUQ00839 825 aaKnown RBP eCLIP12.92□□□□□ -0.34
VPS4B-207ENST00000591519 CAP1Q01518 475 aa12.92□□□□□ -0.34
VPS4B-207ENST00000591519 PPATQ06203 517 aa12.92□□□□□ -0.34
VPS4B-207ENST00000591519 PPIL2Q13356 520 aa12.92□□□□□ -0.34
VPS4B-207ENST00000591519 ARHGEF6Q15052 776 aa12.92□□□□□ -0.34
VPS4B-207ENST00000591519 TAF1CQ15572 869 aaPredicted RBP12.92□□□□□ -0.34
VPS4B-207ENST00000591519 CCDC102BQ68D86 513 aa12.92□□□□□ -0.34
VPS4B-207ENST00000591519 ARMC5Q96C12 935 aa12.92□□□□□ -0.34
VPS4B-207ENST00000591519 PA2G4Q9UQ80 394 aaKnown RBP12.92□□□□□ -0.34
VPS4B-207ENST00000591519 MYH13Q9UKX3 1938 aa12.92□□□□□ -0.34
VPS4B-207ENST00000591519 PDS5AQ29RF7 1337 aaKnown RBP12.91□□□□□ -0.34
VPS4B-207ENST00000591519 TLR2O60603 784 aa12.91□□□□□ -0.34
VPS4B-207ENST00000591519 TIMM10P62072 90 aa12.91□□□□□ -0.34
VPS4B-207ENST00000591519 SNAPC2Q13487 334 aa12.91□□□□□ -0.34
VPS4B-207ENST00000591519 DIXDC1Q155Q3 683 aa12.91□□□□□ -0.34
VPS4B-207ENST00000591519 MIGA2Q7L4E1 593 aa12.91□□□□□ -0.34
VPS4B-207ENST00000591519 ZGPATQ8N5A5 531 aaKnown RBP12.91□□□□□ -0.34
VPS4B-207ENST00000591519 IDI2Q9BXS1 227 aa12.91□□□□□ -0.34
VPS4B-207ENST00000591519 USP40Q9NVE5 1235 aa12.91□□□□□ -0.34
VPS4B-207ENST00000591519 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
VPS4B-207ENST00000591519 BTBD19C9JJ37 291 aa12.9□□□□□ -0.34
VPS4B-207ENST00000591519 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
VPS4B-207ENST00000591519 WDHD1O75717 1129 aaPredicted RBP12.9□□□□□ -0.34
VPS4B-207ENST00000591519 INPP5BP32019 993 aa12.9□□□□□ -0.34
VPS4B-207ENST00000591519 MAP3K10Q02779 954 aa12.9□□□□□ -0.34
VPS4B-207ENST00000591519 TCP10Q12799 353 aa12.9□□□□□ -0.34
VPS4B-207ENST00000591519 NFIAQ12857 509 aa12.9□□□□□ -0.34
VPS4B-207ENST00000591519 NOL9Q5SY16 702 aaKnown RBP12.9□□□□□ -0.34
VPS4B-207ENST00000591519 PRPF38BQ5VTL8 546 aaKnown RBP12.9□□□□□ -0.34
VPS4B-207ENST00000591519 RNF166Q96A37 237 aaPredicted RBP12.9□□□□□ -0.34
VPS4B-207ENST00000591519 KCNH4Q9UQ05 1017 aa12.9□□□□□ -0.34
VPS4B-207ENST00000591519 AKAP2Q9Y2D5 859 aa12.9□□□□□ -0.34
VPS4B-207ENST00000591519 GAKO14976 1311 aa12.89□□□□□ -0.35
VPS4B-207ENST00000591519 SRGAP3O43295 1099 aa12.89□□□□□ -0.35
VPS4B-207ENST00000591519 ENTPD3O75355 529 aa12.89□□□□□ -0.35
VPS4B-207ENST00000591519 ADORA1P30542 326 aa12.89□□□□□ -0.35
VPS4B-207ENST00000591519 A0A1B0GUL7 405 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 PHF20L1A8MW92 1017 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 PPP1R37O75864 691 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 GNRH1P01148 92 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 RASGRF1Q13972 1273 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 SPTY2D1Q68D10 685 aaPredicted RBP12.88□□□□□ -0.35
VPS4B-207ENST00000591519 C17orf99Q6UX52 265 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 ATF7IPQ6VMQ6 1270 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 ANKRD23Q86SG2 305 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 ZFPM1Q8IX07 1006 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 SLF2Q8IX21 1173 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 XAGE2Q96GT9 111 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 HTTP42858 3142 aa12.88□□□□□ -0.35
VPS4B-207ENST00000591519 ATRNL1Q5VV63 1379 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms