RNA–Protein interactions for RNA: ENST00000591470.5

GCDH-216, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-216ENST00000591470 A0A1W2PQD8 194 aa21.91■■□□□ 1.1
GCDH-216ENST00000591470 RFC4P35249 363 aa21.91■■□□□ 1.1
GCDH-216ENST00000591470 RCAN1P53805 252 aa21.91■■□□□ 1.1
GCDH-216ENST00000591470 SART3Q15020 963 aaKnown RBP21.91■■□□□ 1.1
GCDH-216ENST00000591470 CCDC73Q6ZRK6 1079 aa21.91■■□□□ 1.1
GCDH-216ENST00000591470 PCDHA7Q9UN72 937 aa21.91■■□□□ 1.1
GCDH-216ENST00000591470 AFF2P51816 1311 aa21.91■■□□□ 1.1
GCDH-216ENST00000591470 DUOX1Q9NRD9 1551 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 HIBADHP31937 336 aaKnown RBP21.9■■□□□ 1.1
GCDH-216ENST00000591470 IARSP41252 1262 aaKnown RBP21.9■■□□□ 1.1
GCDH-216ENST00000591470 ME1P48163 572 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 FAM160A1Q05DH4 1040 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 WTAPQ15007 396 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 MEX3CQ5U5Q3 659 aaKnown RBP21.9■■□□□ 1.1
GCDH-216ENST00000591470 ADALQ6DHV7 355 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 TMED8Q6PL24 325 aaPredicted RBP21.9■■□□□ 1.1
GCDH-216ENST00000591470 TMTC2Q8N394 836 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 CCDC24Q8N4L8 307 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 KCNG4Q8TDN1 519 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 AIFM3Q96NN9 605 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 MYL10Q9BUA6 226 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 CLIC4Q9Y696 253 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 POLR3DP05423 398 aaPredicted RBP21.9■■□□□ 1.1
GCDH-216ENST00000591470 RRP12Q5JTH9 1297 aaKnown RBP21.9■■□□□ 1.1
GCDH-216ENST00000591470 KRT40Q6A162 431 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 SYNE3Q6ZMZ3 975 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 CCDC144CPQ8IYA2 1237 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 PHKBQ93100 1093 aa21.9■■□□□ 1.1
GCDH-216ENST00000591470 NSUN4Q96CB9 384 aaKnown RBP21.9■■□□□ 1.1
GCDH-216ENST00000591470 ZNF500O60304 480 aaPredicted RBP21.89■■□□□ 1.09
GCDH-216ENST00000591470 FMNL1O95466 1100 aaPredicted RBP21.89■■□□□ 1.09
GCDH-216ENST00000591470 IFNAR1P17181 557 aa21.89■■□□□ 1.09
GCDH-216ENST00000591470 DYNLL1P63167 89 aaKnown RBP21.89■■□□□ 1.09
GCDH-216ENST00000591470 SASS6Q6UVJ0 657 aa21.89■■□□□ 1.09
GCDH-216ENST00000591470 FAM196AQ6ZSG2 479 aa21.89■■□□□ 1.09
GCDH-216ENST00000591470 KIAA1551Q9HCM1 1747 aa21.89■■□□□ 1.09
GCDH-216ENST00000591470 ADRA2BP18089 450 aa21.88■■□□□ 1.09
GCDH-216ENST00000591470 STK38Q15208 465 aa21.88■■□□□ 1.09
GCDH-216ENST00000591470 ANO6Q4KMQ2 910 aa21.88■■□□□ 1.09
GCDH-216ENST00000591470 FSIP1Q8NA03 581 aa21.88■■□□□ 1.09
GCDH-216ENST00000591470 MRPS27Q92552 414 aaKnown RBP21.88■■□□□ 1.09
GCDH-216ENST00000591470 BCL11BQ9C0K0 894 aaPredicted RBP21.88■■□□□ 1.09
GCDH-216ENST00000591470 TOMM22Q9NS69 142 aa21.88■■□□□ 1.09
GCDH-216ENST00000591470 ERICH2A1L162 156 aa21.88■■□□□ 1.09
GCDH-216ENST00000591470 AP5Z1O43299 807 aa21.88■■□□□ 1.09
GCDH-216ENST00000591470 SSRP1Q08945 709 aaKnown RBP21.88■■□□□ 1.09
GCDH-216ENST00000591470 NFIXQ14938 502 aa21.88■■□□□ 1.09
GCDH-216ENST00000591470 SEPT12Q8IYM1 358 aa21.88■■□□□ 1.09
GCDH-216ENST00000591470 TFCP2L1Q9NZI6 479 aa21.88■■□□□ 1.09
GCDH-216ENST00000591470 UBR3Q6ZT12 1888 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 MINDY4BA8MYZ0 360 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 SPTLC2O15270 562 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 CAVIN2O95810 425 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 PTMAP06454 111 aaKnown RBP21.87■■□□□ 1.09
GCDH-216ENST00000591470 FGRP09769 529 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 PCP11498 1178 aaKnown RBP21.87■■□□□ 1.09
GCDH-216ENST00000591470 MECOMQ03112 1051 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 SEC23AQ15436 765 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 ANO1Q5XXA6 986 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 ESR2Q92731 530 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 ZKSCAN3Q9BRR0 538 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 CBX8Q9HC52 389 aa21.87■■□□□ 1.09
GCDH-216ENST00000591470 TRPC5Q9UL62 973 aaPredicted RBP21.87■■□□□ 1.09
GCDH-216ENST00000591470 DLEC1Q9Y238 1755 aa21.86■■□□□ 1.09
GCDH-216ENST00000591470 CCDC88AQ3V6T2 1871 aa21.86■■□□□ 1.09
GCDH-216ENST00000591470 RTN1Q16799 776 aa21.86■■□□□ 1.09
GCDH-216ENST00000591470 FMR1NBQ8N0W7 255 aaPredicted RBP21.86■■□□□ 1.09
GCDH-216ENST00000591470 WASF1Q92558 559 aa21.86■■□□□ 1.09
GCDH-216ENST00000591470 LRRC4BQ9NT99 713 aa21.86■■□□□ 1.09
GCDH-216ENST00000591470 BAZ2AQ9UIF9 1905 aaKnown RBP21.86■■□□□ 1.09
GCDH-216ENST00000591470 LAMB1P07942 1786 aa21.86■■□□□ 1.09
GCDH-216ENST00000591470 KINO60870 393 aaKnown RBP21.86■■□□□ 1.09
GCDH-216ENST00000591470 IGSF3O75054 1194 aa21.86■■□□□ 1.09
GCDH-216ENST00000591470 U2AF2P26368 475 aaKnown RBP eCLIP21.86■■□□□ 1.093e-8■□□□□ 10.2
GCDH-216ENST00000591470 GRAPQ13588 217 aa21.86■■□□□ 1.09
GCDH-216ENST00000591470 GRAPLQ8TC17 118 aaPredicted RBP21.86■■□□□ 1.09
GCDH-216ENST00000591470 SLC26A6Q9BXS9 759 aa21.86■■□□□ 1.09
GCDH-216ENST00000591470 SF3A1Q15459 793 aaKnown RBP21.85■■□□□ 1.09
GCDH-216ENST00000591470 ZNF654Q8IZM8 581 aa21.85■■□□□ 1.09
GCDH-216ENST00000591470 UBAC1Q9BSL1 405 aa21.85■■□□□ 1.09
GCDH-216ENST00000591470 CCDC196A0A1B0GTZ2 297 aa21.84■■□□□ 1.09
GCDH-216ENST00000591470 TRIM29Q14134 588 aa21.84■■□□□ 1.09
GCDH-216ENST00000591470 NBPF11Q86T75 865 aa21.84■■□□□ 1.09
GCDH-216ENST00000591470 LUZP1Q86V48 1076 aa21.84■■□□□ 1.09
GCDH-216ENST00000591470 TXNRD3Q86VQ6 643 aa21.84■■□□□ 1.09
GCDH-216ENST00000591470 TDRD7Q8NHU6 1098 aaKnown RBP21.84■■□□□ 1.09
GCDH-216ENST00000591470 TNKSO95271 1327 aa21.84■■□□□ 1.09
GCDH-216ENST00000591470 SLC39A14Q15043 492 aa21.83■■□□□ 1.09
GCDH-216ENST00000591470 CTR9Q6PD62 1173 aa21.83■■□□□ 1.09
GCDH-216ENST00000591470 STK11IPQ8N1F8 1099 aa21.83■■□□□ 1.09
GCDH-216ENST00000591470 CNBD1Q8NA66 436 aa21.83■■□□□ 1.09
GCDH-216ENST00000591470 LEMD3Q9Y2U8 911 aa21.83■■□□□ 1.09
GCDH-216ENST00000591470 SMIM22K7EJ46 135 aa21.83■■□□□ 1.08
GCDH-216ENST00000591470 NPHP1O15259 732 aa21.83■■□□□ 1.08
GCDH-216ENST00000591470 PPP2R5BQ15173 497 aa21.83■■□□□ 1.08
GCDH-216ENST00000591470 AXDND1Q5T1B0 1012 aaPredicted RBP21.83■■□□□ 1.08
GCDH-216ENST00000591470 FANCBQ8NB91 859 aa21.83■■□□□ 1.08
GCDH-216ENST00000591470 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.83■■□□□ 1.08
GCDH-216ENST00000591470 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.83■■□□□ 1.08
GCDH-216ENST00000591470 PRDX5P30044 214 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms