RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 MAP2K1Q02750 393 aaPredicted RBP14.42□□□□□ -0.1
LIG3-213ENST00000590630 PICALMQ13492 652 aa14.42□□□□□ -0.1
LIG3-213ENST00000590630 RASAL3Q86YV0 1011 aa14.42□□□□□ -0.1
LIG3-213ENST00000590630 ANKRD13AQ8IZ07 590 aa14.42□□□□□ -0.1
LIG3-213ENST00000590630 SH3RF3Q8TEJ3 882 aaPredicted RBP14.42□□□□□ -0.1
LIG3-213ENST00000590630 DDX4Q9NQI0 724 aaKnown RBP14.42□□□□□ -0.1
LIG3-213ENST00000590630 MYH1P12882 1939 aa14.42□□□□□ -0.1
LIG3-213ENST00000590630 ATRNL1Q5VV63 1379 aa14.42□□□□□ -0.1
LIG3-213ENST00000590630 SALL3Q9BXA9 1300 aa14.41□□□□□ -0.1
LIG3-213ENST00000590630 AOC2O75106 756 aa14.41□□□□□ -0.1
LIG3-213ENST00000590630 TSHZ3Q63HK5 1081 aa14.41□□□□□ -0.1
LIG3-213ENST00000590630 ZSCAN29Q8IWY8 852 aaPredicted RBP14.41□□□□□ -0.1
LIG3-213ENST00000590630 ZFPM1Q8IX07 1006 aa14.41□□□□□ -0.1
LIG3-213ENST00000590630 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.41□□□□□ -0.1
LIG3-213ENST00000590630 PI4K2BQ8TCG2 481 aa14.41□□□□□ -0.1
LIG3-213ENST00000590630 OTUD7AQ8TE49 926 aaPredicted RBP14.41□□□□□ -0.1
LIG3-213ENST00000590630 CSRNP1Q96S65 589 aa14.41□□□□□ -0.1
LIG3-213ENST00000590630 ZNF532Q9HCE3 1301 aa14.41□□□□□ -0.1
LIG3-213ENST00000590630 TCRBV5S4A2TA0A5A2 114 aa14.4□□□□□ -0.1
LIG3-213ENST00000590630 ADD2P35612 726 aa14.4□□□□□ -0.1
LIG3-213ENST00000590630 NUCB1Q02818 461 aa14.4□□□□□ -0.1
LIG3-213ENST00000590630 ZSCAN25Q6NSZ9 544 aa14.4□□□□□ -0.1
LIG3-213ENST00000590630 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
LIG3-213ENST00000590630 MIGA1Q8NAN2 632 aa14.4□□□□□ -0.1
LIG3-213ENST00000590630 SLC10A4Q96EP9 437 aa14.4□□□□□ -0.1
LIG3-213ENST00000590630 ZNF341Q9BYN7 854 aa14.4□□□□□ -0.1
LIG3-213ENST00000590630 LNPKQ9C0E8 428 aa14.4□□□□□ -0.1
LIG3-213ENST00000590630 OSBPL5Q9H0X9 879 aaPredicted RBP14.4□□□□□ -0.1
LIG3-213ENST00000590630 STAP2Q9UGK3 403 aa14.4□□□□□ -0.1
LIG3-213ENST00000590630 CSADQ9Y600 493 aa14.4□□□□□ -0.1
LIG3-213ENST00000590630 MAGEB6P1A0A0J9YX57 407 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 DDTLA6NHG4 134 aaPredicted RBP14.39□□□□□ -0.11
LIG3-213ENST00000590630 ZBTB48P10074 688 aaPredicted RBP14.39□□□□□ -0.11
LIG3-213ENST00000590630 DYNLL1P63167 89 aaKnown RBP14.39□□□□□ -0.11
LIG3-213ENST00000590630 MAP3K9P80192 1104 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 UBE3CQ15386 1083 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 B4GALNT3Q6L9W6 998 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 MIGA2Q7L4E1 593 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 SH3BP5LQ7L8J4 393 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 CHD1LQ86WJ1 897 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 KBTBD3Q8NAB2 608 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 TGFBRAP1Q8WUH2 860 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 CLMNQ96JQ2 1002 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 WRNIP1Q96S55 665 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 RIOK1Q9BRS2 568 aaKnown RBP14.39□□□□□ -0.11
LIG3-213ENST00000590630 DHX36Q9H2U1 1008 aaKnown RBP14.39□□□□□ -0.11
LIG3-213ENST00000590630 WBP1LQ9NX94 342 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 NAV1Q8NEY1 1877 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 FLT1P17948 1338 aa14.39□□□□□ -0.11
LIG3-213ENST00000590630 DDX60LQ5H9U9 1706 aaKnown RBP14.38□□□□□ -0.11
LIG3-213ENST00000590630 HSPA1AP0DMV8 641 aaKnown RBP14.38□□□□□ -0.11
LIG3-213ENST00000590630 HSPA1BP0DMV9 641 aaKnown RBP14.38□□□□□ -0.11
LIG3-213ENST00000590630 PDE1AP54750 535 aa14.38□□□□□ -0.11
LIG3-213ENST00000590630 MAP3K10Q02779 954 aa14.38□□□□□ -0.11
LIG3-213ENST00000590630 VGLL4Q14135 290 aa14.38□□□□□ -0.11
LIG3-213ENST00000590630 LRRFIP1Q32MZ4 808 aaKnown RBP14.38□□□□□ -0.11
LIG3-213ENST00000590630 SPRYD7Q5W111 196 aa14.38□□□□□ -0.11
LIG3-213ENST00000590630 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.38□□□□□ -0.11
LIG3-213ENST00000590630 AIDAQ96BJ3 306 aa14.38□□□□□ -0.11
LIG3-213ENST00000590630 BEGAINQ9BUH8 593 aa14.38□□□□□ -0.11
LIG3-213ENST00000590630 ZNF112Q9UJU3 913 aa14.38□□□□□ -0.11
LIG3-213ENST00000590630 SIPA1L1O43166 1804 aa14.38□□□□□ -0.11
LIG3-213ENST00000590630 TBC1D12O60347 775 aa14.37□□□□□ -0.11
LIG3-213ENST00000590630 ZFYP08048 801 aaPredicted RBP14.37□□□□□ -0.11
LIG3-213ENST00000590630 KIF23Q02241 960 aaPredicted RBP14.37□□□□□ -0.11
LIG3-213ENST00000590630 MAPKAPK5Q8IW41 473 aa14.37□□□□□ -0.11
LIG3-213ENST00000590630 WNK4Q96J92 1243 aa14.37□□□□□ -0.11
LIG3-213ENST00000590630 ZIC5Q96T25 663 aa14.37□□□□□ -0.11
LIG3-213ENST00000590630 CRNKL1Q9BZJ0 848 aaKnown RBP14.37□□□□□ -0.11
LIG3-213ENST00000590630 PI4KBQ9UBF8 816 aa14.37□□□□□ -0.11
LIG3-213ENST00000590630 DOCK1Q14185 1865 aa14.37□□□□□ -0.11
LIG3-213ENST00000590630 ATAD5Q96QE3 1844 aa14.36□□□□□ -0.11
LIG3-213ENST00000590630 CA12O43570 354 aa14.36□□□□□ -0.11
LIG3-213ENST00000590630 USP5P45974 858 aa14.36□□□□□ -0.11
LIG3-213ENST00000590630 ELP3Q9H9T3 547 aa14.36□□□□□ -0.11
LIG3-213ENST00000590630 BAZ2AQ9UIF9 1905 aaKnown RBP14.35□□□□□ -0.11
LIG3-213ENST00000590630 PHF20L1A8MW92 1017 aa14.35□□□□□ -0.11
LIG3-213ENST00000590630 INPP5BP32019 993 aa14.35□□□□□ -0.11
LIG3-213ENST00000590630 SREBF2Q12772 1141 aa14.35□□□□□ -0.11
LIG3-213ENST00000590630 NOL9Q5SY16 702 aaKnown RBP14.35□□□□□ -0.11
LIG3-213ENST00000590630 ERO1BQ86YB8 467 aa14.35□□□□□ -0.11
LIG3-213ENST00000590630 ZKSCAN4Q969J2 545 aaPredicted RBP14.35□□□□□ -0.11
LIG3-213ENST00000590630 OPTNQ96CV9 577 aa14.35□□□□□ -0.11
LIG3-213ENST00000590630 HERC5Q9UII4 1024 aaKnown RBP14.35□□□□□ -0.11
LIG3-213ENST00000590630 SNCAIPQ9Y6H5 919 aa14.35□□□□□ -0.11
LIG3-213ENST00000590630 MANSC4A6NHS7 340 aaPredicted RBP14.34□□□□□ -0.11
LIG3-213ENST00000590630 SPDYE5A6NIY4 337 aa14.34□□□□□ -0.11
LIG3-213ENST00000590630 RNF113AO15541 343 aaKnown RBP14.34□□□□□ -0.11
LIG3-213ENST00000590630 MBD4O95243 580 aa14.34□□□□□ -0.11
LIG3-213ENST00000590630 HLA-DOAP06340 250 aa14.34□□□□□ -0.11
LIG3-213ENST00000590630 CENPBP07199 599 aaPredicted RBP14.34□□□□□ -0.11
LIG3-213ENST00000590630 INHBEP58166 350 aa14.34□□□□□ -0.11
LIG3-213ENST00000590630 MKRN3Q13064 507 aaKnown RBP14.34□□□□□ -0.11
LIG3-213ENST00000590630 SLFNL1Q499Z3 407 aa14.34□□□□□ -0.11
LIG3-213ENST00000590630 LCORLQ8N3X6 602 aa14.34□□□□□ -0.11
LIG3-213ENST00000590630 APPBP2Q92624 585 aa14.34□□□□□ -0.11
LIG3-213ENST00000590630 EVI5LQ96CN4 794 aa14.34□□□□□ -0.11
LIG3-213ENST00000590630 FSD1Q9BTV5 496 aa14.34□□□□□ -0.11
LIG3-213ENST00000590630 OSBPL3Q9H4L5 887 aa14.34□□□□□ -0.11
LIG3-213ENST00000590630 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms