RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 CLMNQ96JQ2 1002 aa20.03■□□□□ 0.8
GCDH-213ENST00000590627 R3HDMLQ9H3Y0 253 aa20.03■□□□□ 0.8
GCDH-213ENST00000590627 TTF2Q9UNY4 1162 aaKnown RBP20.03■□□□□ 0.8
GCDH-213ENST00000590627 USP2O75604 605 aaPredicted RBP20.02■□□□□ 0.8
GCDH-213ENST00000590627 SPDYE2Q495Y8 402 aa20.02■□□□□ 0.8
GCDH-213ENST00000590627 TBC1D9Q6ZT07 1266 aa20.02■□□□□ 0.8
GCDH-213ENST00000590627 ANKRD13AQ8IZ07 590 aa20.02■□□□□ 0.8
GCDH-213ENST00000590627 FSD1Q9BTV5 496 aa20.02■□□□□ 0.8
GCDH-213ENST00000590627 CDC45O75419 566 aa20.01■□□□□ 0.79
GCDH-213ENST00000590627 LRRFIP1Q32MZ4 808 aaKnown RBP20.01■□□□□ 0.79
GCDH-213ENST00000590627 SPTY2D1Q68D10 685 aaPredicted RBP20.01■□□□□ 0.79
GCDH-213ENST00000590627 TMED8Q6PL24 325 aaPredicted RBP20.01■□□□□ 0.79
GCDH-213ENST00000590627 ZNF70Q9UC06 446 aaPredicted RBP20.01■□□□□ 0.79
GCDH-213ENST00000590627 SUGT1Q9Y2Z0 365 aa20.01■□□□□ 0.79
GCDH-213ENST00000590627 HIP1O00291 1037 aa20■□□□□ 0.79
GCDH-213ENST00000590627 MAP3K12Q12852 859 aa20■□□□□ 0.79
GCDH-213ENST00000590627 OTUD7BQ6GQQ9 843 aa20■□□□□ 0.79
GCDH-213ENST00000590627 DDX24Q9GZR7 859 aaKnown RBP eCLIP20■□□□□ 0.79
GCDH-213ENST00000590627 MYH13Q9UKX3 1938 aa20■□□□□ 0.79
GCDH-213ENST00000590627 IGF2BP3O00425 579 aaKnown RBP eCLIP19.99■□□□□ 0.79
GCDH-213ENST00000590627 ZFYP08048 801 aaPredicted RBP19.99■□□□□ 0.79
GCDH-213ENST00000590627 CHMLP26374 656 aa19.99■□□□□ 0.79
GCDH-213ENST00000590627 ZSCAN25Q6NSZ9 544 aa19.99■□□□□ 0.79
GCDH-213ENST00000590627 TDRD3Q9H7E2 651 aaKnown RBP19.99■□□□□ 0.79
GCDH-213ENST00000590627 LRP2BPQ9P2M1 347 aa19.99■□□□□ 0.79
GCDH-213ENST00000590627 ABCF2Q9UG63 623 aa19.99■□□□□ 0.79
GCDH-213ENST00000590627 OTOFQ9HC10 1997 aa19.98■□□□□ 0.79
GCDH-213ENST00000590627 TESPA1A2RU30 521 aaPredicted RBP19.98■□□□□ 0.79
GCDH-213ENST00000590627 RNF113AO15541 343 aaKnown RBP19.98■□□□□ 0.79
GCDH-213ENST00000590627 IDH1O75874 414 aaKnown RBP19.98■□□□□ 0.79
GCDH-213ENST00000590627 CRKP46108 304 aa19.98■□□□□ 0.79
GCDH-213ENST00000590627 TNNI2P48788 182 aa19.98■□□□□ 0.79
GCDH-213ENST00000590627 HDLBPQ00341 1268 aaKnown RBP19.98■□□□□ 0.79
GCDH-213ENST00000590627 ERICH6Q7L0X2 663 aa19.98■□□□□ 0.79
GCDH-213ENST00000590627 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.98■□□□□ 0.79
GCDH-213ENST00000590627 DOCK2Q92608 1830 aa19.97■□□□□ 0.79
GCDH-213ENST00000590627 LDHBP07195 334 aaKnown RBP19.97■□□□□ 0.79
GCDH-213ENST00000590627 ADD2P35612 726 aa19.97■□□□□ 0.79
GCDH-213ENST00000590627 GJA5P36382 358 aa19.97■□□□□ 0.79
GCDH-213ENST00000590627 UBE3CQ15386 1083 aa19.97■□□□□ 0.79
GCDH-213ENST00000590627 TEPSINQ96N21 525 aa19.97■□□□□ 0.79
GCDH-213ENST00000590627 PDE6AP16499 860 aa19.96■□□□□ 0.79
GCDH-213ENST00000590627 PRDX5P30044 214 aa19.96■□□□□ 0.79
GCDH-213ENST00000590627 C8orf34Q49A92 452 aa19.96■□□□□ 0.79
GCDH-213ENST00000590627 SLC9C2Q5TAH2 1124 aa19.96■□□□□ 0.79
GCDH-213ENST00000590627 CASC1Q6TDU7 716 aa19.96■□□□□ 0.79
GCDH-213ENST00000590627 NSUN4Q96CB9 384 aaKnown RBP19.96■□□□□ 0.79
GCDH-213ENST00000590627 DIAPH3Q9NSV4 1193 aa19.96■□□□□ 0.79
GCDH-213ENST00000590627 RAI14Q9P0K7 980 aa19.96■□□□□ 0.79
GCDH-213ENST00000590627 TCRBV5S4A2TA0A5A2 114 aa19.95■□□□□ 0.78
GCDH-213ENST00000590627 GRIK5Q16478 980 aa19.95■□□□□ 0.78
GCDH-213ENST00000590627 ZMYM1Q5SVZ6 1142 aa19.95■□□□□ 0.78
GCDH-213ENST00000590627 ERO1AQ96HE7 468 aa19.95■□□□□ 0.78
GCDH-213ENST00000590627 MRIQ9BWK5 157 aa19.95■□□□□ 0.78
GCDH-213ENST00000590627 TRIM17Q9Y577 477 aa19.95■□□□□ 0.78
GCDH-213ENST00000590627 AK9Q5TCS8 1911 aa19.95■□□□□ 0.78
GCDH-213ENST00000590627 TCP10L2B9ZVM9 353 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 MECOMQ03112 1051 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 PRPF38BQ5VTL8 546 aaKnown RBP19.94■□□□□ 0.78
GCDH-213ENST00000590627 OTOP1Q7RTM1 612 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 MAGEB6Q8N7X4 407 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 ZNF384Q8TF68 577 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 RUFY2Q8WXA3 655 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 APPBP2Q92624 585 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 TEKT1Q969V4 418 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 OPTNQ96CV9 577 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 ELP3Q9H9T3 547 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 HELLSQ9NRZ9 838 aa19.94■□□□□ 0.78
GCDH-213ENST00000590627 HTTP42858 3142 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 CHGBP05060 677 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 GSTO1P78417 241 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 NMIQ13287 307 aaPredicted RBP19.93■□□□□ 0.78
GCDH-213ENST00000590627 CRHR2Q13324 411 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.93■□□□□ 0.78
GCDH-213ENST00000590627 DZIP1Q86YF9 867 aaKnown RBP19.93■□□□□ 0.78
GCDH-213ENST00000590627 CDAN1Q8IWY9 1227 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 FAM227BQ96M60 508 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 PTPN18Q99952 460 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 TMEM39BQ9GZU3 492 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 MAST3O60307 1309 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 RAD50Q92878 1312 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 ZNF532Q9HCE3 1301 aa19.93■□□□□ 0.78
GCDH-213ENST00000590627 MAP3K9P80192 1104 aa19.92■□□□□ 0.78
GCDH-213ENST00000590627 NAA16Q6N069 864 aaPredicted RBP19.92■□□□□ 0.78
GCDH-213ENST00000590627 CWC27Q6UX04 472 aaKnown RBP19.92■□□□□ 0.78
GCDH-213ENST00000590627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.92■□□□□ 0.78
GCDH-213ENST00000590627 FAM163AQ96GL9 167 aaPredicted RBP19.92■□□□□ 0.78
GCDH-213ENST00000590627 MS4A4AQ96JQ5 239 aa19.92■□□□□ 0.78
GCDH-213ENST00000590627 ZDHHC15Q96MV8 337 aa19.92■□□□□ 0.78
GCDH-213ENST00000590627 ESYT1Q9BSJ8 1104 aa19.92■□□□□ 0.78
GCDH-213ENST00000590627 MYO5AQ9Y4I1 1855 aaKnown RBP19.92■□□□□ 0.78
GCDH-213ENST00000590627 A0A0D9SFI3 127 aa19.91■□□□□ 0.78
GCDH-213ENST00000590627 SGSM2O43147 1006 aa19.91■□□□□ 0.78
GCDH-213ENST00000590627 EIF5BO60841 1220 aaKnown RBP19.91■□□□□ 0.78
GCDH-213ENST00000590627 LDHCP07864 332 aa19.91■□□□□ 0.78
GCDH-213ENST00000590627 CYP7A1P22680 504 aa19.91■□□□□ 0.78
GCDH-213ENST00000590627 SP3Q02447 781 aa19.91■□□□□ 0.78
GCDH-213ENST00000590627 VGLL4Q14135 290 aa19.91■□□□□ 0.78
GCDH-213ENST00000590627 SLFNL1Q499Z3 407 aa19.91■□□□□ 0.78
GCDH-213ENST00000590627 MCMDC2Q4G0Z9 681 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms