RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ALS2CR12Q96Q35 445 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 SEPT11Q9NVA2 429 aaKnown RBP19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 ANKARQ7Z5J8 1434 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 ERVV-2B6SEH9 535 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 PSMA7O14818 248 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 RCOR1Q9UKL0 485 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 CTR9Q6PD62 1173 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 IL25Q9H293 177 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 ZMYM6O95789 1325 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 MATR3P43243 847 aaKnown RBP eCLIP19.44■□□□□ 0.71e-6■■■■■ 30.1
SMARCA4-215ENST00000590574 FBXO18Q8NFZ0 1043 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 GUCA1BQ9UMX6 200 aa19.44■□□□□ 0.7
SMARCA4-215ENST00000590574 SYCP1Q15431 976 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 V9GY48 417 aaPredicted RBP19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 CD163L1Q9NR16 1453 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 OVOS2A0A0J9YW53 1432 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 OVOS2Q6IE36 1432 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 ERLIN2O94905 339 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 CYLC1P35663 651 aaPredicted RBP19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 CNGA4Q8IV77 575 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 SMARCC1Q92922 1105 aaPredicted RBP19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 GPR108Q9NPR9 543 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 ARHGEF28Q8N1W1 1705 aaKnown RBP19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 ARHGAP6O43182 974 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 RHOXF2BP0C7M4 288 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 CCDC96Q2M329 555 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 KLHL34Q8N239 644 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 RHOXF2Q9BQY4 288 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 A0A1W2PQ27 194 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 A0A1W2PQ64 194 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 A0A1W2PQD8 194 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 ODF2Q5BJF6 829 aa19.43■□□□□ 0.7
SMARCA4-215ENST00000590574 ZNF76P36508 570 aa19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 CLIC6Q96NY7 704 aa19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 PLIN2Q99541 437 aa19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 PIP4K2BP78356 416 aa19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 CCDC40Q4G0X9 1142 aa19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 NBPF5PQ86XG9 351 aaPredicted RBP19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 ZFP91Q96JP5 570 aaPredicted RBP19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 SERTAD1Q9UHV2 236 aa19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 SYNRGQ9UMZ2 1314 aa19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 CLTCQ00610 1675 aaKnown RBP19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 PRDM1O75626 825 aa19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 CALML3P27482 149 aa19.42■□□□□ 0.7
SMARCA4-215ENST00000590574 ERBB3P21860 1342 aa19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 ASIC1P78348 528 aa19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 DPCR1Q3MIW9 517 aa19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 LDHCP07864 332 aa19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 RBM6P78332 1123 aaKnown RBP19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 CMTR1Q8N1G2 835 aaKnown RBP19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 MCM9Q9NXL9 1143 aa19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 CTSWP56202 376 aa19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 SLFNL1Q499Z3 407 aa19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.41■□□□□ 0.72e-6■■■□□ 14.7
SMARCA4-215ENST00000590574 FRMPD1Q5SYB0 1578 aa19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 CIAO1O76071 339 aa19.41■□□□□ 0.7
SMARCA4-215ENST00000590574 CKAP4Q07065 602 aaKnown RBP19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 PGBD1Q96JS3 809 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 VPS16Q9H269 839 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 AKR1B10O60218 316 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 AKNAD1Q5T1N1 836 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 PIK3AP1Q6ZUJ8 805 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 DRC1Q96MC2 740 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 hCG_1642624A0A1W2PR95 340 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 GNAQP50148 359 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 ADKP55263 362 aaKnown RBP19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 UBA5Q9GZZ9 404 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 OSBP2Q969R2 916 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 JAG2Q9Y219 1238 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 MROH5Q6ZUA9 1318 aa19.4■□□□□ 0.7
SMARCA4-215ENST00000590574 SHTN1A0MZ66 631 aa19.39■□□□□ 0.7
SMARCA4-215ENST00000590574 NAPAP54920 295 aa19.39■□□□□ 0.7
SMARCA4-215ENST00000590574 NOSTRINQ8IVI9 506 aa19.39■□□□□ 0.7
SMARCA4-215ENST00000590574 ZBTB38Q8NAP3 1195 aaPredicted RBP19.39■□□□□ 0.7
SMARCA4-215ENST00000590574 RPGRQ92834 1020 aaKnown RBP19.39■□□□□ 0.7
SMARCA4-215ENST00000590574 CAPZA3Q96KX2 299 aa19.39■□□□□ 0.7
SMARCA4-215ENST00000590574 BTG4Q9NY30 223 aa19.39■□□□□ 0.7
SMARCA4-215ENST00000590574 PDE6AP16499 860 aa19.39■□□□□ 0.69
SMARCA4-215ENST00000590574 GABPB1Q06547 395 aaPredicted RBP19.39■□□□□ 0.69
SMARCA4-215ENST00000590574 ERCC6LQ2NKX8 1250 aa19.39■□□□□ 0.69
SMARCA4-215ENST00000590574 WWC2Q6AWC2 1192 aa19.39■□□□□ 0.69
SMARCA4-215ENST00000590574 SHPRHQ149N8 1683 aa19.39■□□□□ 0.69
SMARCA4-215ENST00000590574 ZFYVE27Q5T4F4 411 aa19.39■□□□□ 0.69
SMARCA4-215ENST00000590574 DTHD1Q6ZMT9 781 aa19.39■□□□□ 0.69
SMARCA4-215ENST00000590574 LINC00301Q8NCQ3 95 aa19.39■□□□□ 0.69
SMARCA4-215ENST00000590574 POLR3EQ9NVU0 708 aa19.39■□□□□ 0.69
SMARCA4-215ENST00000590574 MAPK8IP1Q9UQF2 711 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 NCAPD2Q15021 1401 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 GSTO1P78417 241 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 SPECC1LQ69YQ0 1117 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 IFNL3Q8IZI9 196 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 FANCLQ9NW38 375 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 PCCAP05165 728 aaPredicted RBP19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 KRT83P78385 493 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 VPS18Q9P253 973 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 LUC7L2Q9Y383 392 aaKnown RBP19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 TTC38Q5R3I4 469 aa19.38■□□□□ 0.69
SMARCA4-215ENST00000590574 VPS54Q9P1Q0 977 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms