RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 HDGFL1Q5TGJ6 251 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 ADALQ6DHV7 355 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 GRAMD1CQ8IYS0 662 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 CALR3Q96L12 384 aaKnown RBP17.28■□□□□ 0.36
CIRBP-228ENST00000590347 SAMSN1Q9NSI8 373 aaKnown RBP17.28■□□□□ 0.36
CIRBP-228ENST00000590347 RAB21Q9UL25 225 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 TUBGCP6Q96RT7 1819 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 PRPF6O94906 941 aaKnown RBP17.28■□□□□ 0.36
CIRBP-228ENST00000590347 CYP21A2P08686 494 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 CCDC175P0C221 793 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 KCTD16Q68DU8 428 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 LINC00301Q8NCQ3 95 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 ACBD3Q9H3P7 528 aa17.28■□□□□ 0.36
CIRBP-228ENST00000590347 PEX19P40855 299 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 STX17P56962 302 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 KLHL10Q6JEL2 608 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 HNRNPLLQ8WVV9 542 aaKnown RBP17.27■□□□□ 0.36
CIRBP-228ENST00000590347 KCNB2Q92953 911 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 ZKSCAN4Q969J2 545 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-228ENST00000590347 MIEF2Q96C03 454 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 NPHP4O75161 1426 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-228ENST00000590347 GOLGA6CA6NDK9 693 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 GNAT3A8MTJ3 354 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 CBFA2T2O43439 604 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 GOLGA6DP0CG33 693 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 AKAP12Q02952 1782 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 POLA2Q14181 598 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 IGSF1Q8N6C5 1336 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 GOLGA6AQ9NYA3 693 aa17.27■□□□□ 0.36
CIRBP-228ENST00000590347 CTAGE9A4FU28 777 aa17.27■□□□□ 0.35
CIRBP-228ENST00000590347 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.351e-8■□□□□ 9.5
CIRBP-228ENST00000590347 STIM1Q13586 685 aa17.27■□□□□ 0.35
CIRBP-228ENST00000590347 CEP112Q8N8E3 955 aa17.27■□□□□ 0.35
CIRBP-228ENST00000590347 MSANTD4Q8NCY6 345 aa17.27■□□□□ 0.35
CIRBP-228ENST00000590347 FAM76AQ8TAV0 307 aa17.27■□□□□ 0.35
CIRBP-228ENST00000590347 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.35
CIRBP-228ENST00000590347 HPCAL4Q9UM19 191 aa17.27■□□□□ 0.35
CIRBP-228ENST00000590347 GPTP24298 496 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 CDC25CP30307 473 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 NF2P35240 595 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 USP5P45974 858 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 KCTD19Q17RG1 926 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-228ENST00000590347 SH2D3CQ8N5H7 860 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 CABS1Q96KC9 395 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 AIFM3Q96NN9 605 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 CRACR2AQ9BSW2 395 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 ODF2LQ9ULJ1 636 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 NFE2L3Q9Y4A8 694 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 KCNQ3O43525 872 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 PPP1R12BO60237 982 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-228ENST00000590347 TAF5LO75529 589 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 PDHBP11177 359 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 CDC25AP30304 524 aa17.26■□□□□ 0.35
CIRBP-228ENST00000590347 FOXP4Q8IVH2 680 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-228ENST00000590347 SYKP43405 635 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 OTUD6BQ8N6M0 293 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 FAXDC2Q96IV6 333 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 SCLT1Q96NL6 688 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.25■□□□□ 0.35
CIRBP-228ENST00000590347 ADGRG1Q9Y653 693 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 NDUFAB1O14561 156 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 GCP02774 474 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 BMP6P22004 513 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 GPATCH3Q96I76 525 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 COL15A1P39059 1388 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 STX10O60499 249 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 CWF19L2Q2TBE0 894 aaKnown RBP17.25■□□□□ 0.35
CIRBP-228ENST00000590347 SPECC1LQ69YQ0 1117 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 OLFM4Q6UX06 510 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 PCDHA5Q9Y5H7 936 aa17.25■□□□□ 0.35
CIRBP-228ENST00000590347 SHTN1A0MZ66 631 aa17.24■□□□□ 0.35
CIRBP-228ENST00000590347 USP8P40818 1118 aa17.24■□□□□ 0.35
CIRBP-228ENST00000590347 RRP36Q96EU6 259 aaKnown RBP17.24■□□□□ 0.35
CIRBP-228ENST00000590347 CAPS2Q9BXY5 557 aa17.24■□□□□ 0.35
CIRBP-228ENST00000590347 VEZTQ9HBM0 779 aa17.24■□□□□ 0.35
CIRBP-228ENST00000590347 GUCA1BQ9UMX6 200 aa17.24■□□□□ 0.35
CIRBP-228ENST00000590347 AXIN2Q9Y2T1 843 aa17.24■□□□□ 0.35
CIRBP-228ENST00000590347 EIF4E1BA6NMX2 242 aaKnown RBP17.24■□□□□ 0.35
CIRBP-228ENST00000590347 RBL2Q08999 1139 aa17.24■□□□□ 0.35
CIRBP-228ENST00000590347 GPIHBP1Q8IV16 184 aa17.24■□□□□ 0.35
CIRBP-228ENST00000590347 EME2A4GXA9 379 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-228ENST00000590347 SYNE3Q6ZMZ3 975 aa17.23■□□□□ 0.35
CIRBP-228ENST00000590347 NAA25Q14CX7 972 aa17.23■□□□□ 0.35
CIRBP-228ENST00000590347 ARMC3Q5W041 872 aa17.23■□□□□ 0.35
CIRBP-228ENST00000590347 DDX46Q7L014 1031 aaKnown RBP17.23■□□□□ 0.35
CIRBP-228ENST00000590347 SLF1Q9BQI6 1058 aa17.23■□□□□ 0.35
CIRBP-228ENST00000590347 C9orf78Q9NZ63 289 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-228ENST00000590347 BACH1O14867 736 aa17.23■□□□□ 0.35
CIRBP-228ENST00000590347 PFKFB2O60825 505 aa17.23■□□□□ 0.35
CIRBP-228ENST00000590347 KIAA0754O94854 1291 aa17.23■□□□□ 0.35
CIRBP-228ENST00000590347 FDPSP14324 419 aaKnown RBP17.23■□□□□ 0.35
CIRBP-228ENST00000590347 MATR3P43243 847 aaKnown RBP eCLIP17.23■□□□□ 0.35
CIRBP-228ENST00000590347 CCNHP51946 323 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-228ENST00000590347 TICAM2Q86XR7 235 aa17.23■□□□□ 0.35
CIRBP-228ENST00000590347 BCCIPQ9P287 314 aaKnown RBP eCLIP17.23■□□□□ 0.35
CIRBP-228ENST00000590347 CRB1P82279 1406 aa17.22■□□□□ 0.35
CIRBP-228ENST00000590347 AGPSO00116 658 aa17.22■□□□□ 0.35
CIRBP-228ENST00000590347 CLNS1AP54105 237 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms