RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 TAF1CQ15572 869 aaPredicted RBP9.35□□□□□ -0.91
NPC1-208ENST00000590301 CHRDL2Q6WN34 429 aa9.35□□□□□ -0.91
NPC1-208ENST00000590301 OTOP1Q7RTM1 612 aa9.35□□□□□ -0.91
NPC1-208ENST00000590301 ZKSCAN4Q969J2 545 aaPredicted RBP9.35□□□□□ -0.91
NPC1-208ENST00000590301 HMG20BQ9P0W2 317 aa9.35□□□□□ -0.91
NPC1-208ENST00000590301 DAXXQ9UER7 740 aaPredicted RBP9.35□□□□□ -0.91
NPC1-208ENST00000590301 NOP58Q9Y2X3 529 aaKnown RBP9.35□□□□□ -0.91
NPC1-208ENST00000590301 RFX7Q2KHR2 1363 aa9.35□□□□□ -0.91
NPC1-208ENST00000590301 GPR75-ASB3A0A0A6YYF3 556 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 IRF6O14896 467 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 ZBTB7BO15156 539 aaPredicted RBP9.34□□□□□ -0.91
NPC1-208ENST00000590301 BTDP43251 543 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 RGS3P49796 1198 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 MAP3K10Q02779 954 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 OS9Q13438 667 aaPredicted RBP9.34□□□□□ -0.91
NPC1-208ENST00000590301 CCDC158Q5M9N0 1113 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 TMED8Q6PL24 325 aaPredicted RBP9.34□□□□□ -0.91
NPC1-208ENST00000590301 MIGA2Q7L4E1 593 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 ITPRIPQ8IWB1 547 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 ZNF512BQ96KM6 892 aaPredicted RBP9.34□□□□□ -0.91
NPC1-208ENST00000590301 EFCC1Q9HA90 598 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 KCNH4Q9UQ05 1017 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 TNNQ9UQP3 1299 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 TRIM17Q9Y577 477 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 ATRNL1Q5VV63 1379 aa9.34□□□□□ -0.91
NPC1-208ENST00000590301 POLR2AP24928 1970 aaKnown RBP9.33□□□□□ -0.92
NPC1-208ENST00000590301 CXCL11O14625 94 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 TLR2O60603 784 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 SURF6O75683 361 aaKnown RBP9.33□□□□□ -0.92
NPC1-208ENST00000590301 GNRH1P01148 92 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 INPP5BP32019 993 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 SOX10P56693 466 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 TNNI3KQ59H18 835 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 ANKRD23Q86SG2 305 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 ERC1Q8IUD2 1116 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 ZSCAN29Q8IWY8 852 aaPredicted RBP9.33□□□□□ -0.92
NPC1-208ENST00000590301 FAM43AQ8N2R8 423 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 CD99L2Q8TCZ2 262 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 NSUN4Q96CB9 384 aaKnown RBP9.33□□□□□ -0.92
NPC1-208ENST00000590301 NOL10Q9BSC4 688 aaKnown RBP9.33□□□□□ -0.92
NPC1-208ENST00000590301 PICK1Q9NRD5 415 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 LRP2BPQ9P2M1 347 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 PTPN22Q9Y2R2 807 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 FPGT-TNNI3KV9GXZ4 949 aa9.33□□□□□ -0.92
NPC1-208ENST00000590301 BTBD19C9JJ37 291 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 TBC1D12O60347 775 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 CTNND1O60716 968 aaKnown RBP9.32□□□□□ -0.92
NPC1-208ENST00000590301 BAG3O95817 575 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 PLCG2P16885 1265 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 MCAMP43121 646 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 PRMT2P55345 433 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 RHBDL3P58872 404 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 KIF22Q14807 665 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 HSP90AB4PQ58FF6 505 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 TTC39AQ5SRH9 613 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 CERS3Q8IU89 383 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 SCYL3Q8IZE3 742 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 ARMC5Q96C12 935 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 CHMP4BQ9H444 224 aaKnown RBP9.32□□□□□ -0.92
NPC1-208ENST00000590301 RAI14Q9P0K7 980 aa9.32□□□□□ -0.92
NPC1-208ENST00000590301 COL2A1P02458 1487 aaPredicted RBP9.32□□□□□ -0.92
NPC1-208ENST00000590301 ECM29Q5VYK3 1845 aa9.31□□□□□ -0.92
NPC1-208ENST00000590301 PHF20L1A8MW92 1017 aa9.31□□□□□ -0.92
NPC1-208ENST00000590301 RLBP1P12271 317 aa9.31□□□□□ -0.92
NPC1-208ENST00000590301 PICALMQ13492 652 aa9.31□□□□□ -0.92
NPC1-208ENST00000590301 PI16Q6UXB8 463 aa9.31□□□□□ -0.92
NPC1-208ENST00000590301 SH3BP5LQ7L8J4 393 aa9.31□□□□□ -0.92
NPC1-208ENST00000590301 FASTKD5Q7L8L6 764 aaKnown RBP9.31□□□□□ -0.92
NPC1-208ENST00000590301 ZFPM1Q8IX07 1006 aa9.31□□□□□ -0.92
NPC1-208ENST00000590301 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.31□□□□□ -0.92
NPC1-208ENST00000590301 ZNF384Q8TF68 577 aa9.31□□□□□ -0.92
NPC1-208ENST00000590301 PARK7Q99497 189 aaKnown RBP9.31□□□□□ -0.92
NPC1-208ENST00000590301 TBC1D2Q9BYX2 928 aa9.31□□□□□ -0.92
NPC1-208ENST00000590301 SLC45A1Q9Y2W3 748 aa9.31□□□□□ -0.92
NPC1-208ENST00000590301 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.31□□□□□ -0.92
NPC1-208ENST00000590301 PDHXO00330 501 aa9.3□□□□□ -0.92
NPC1-208ENST00000590301 PTPRAP18433 802 aa9.3□□□□□ -0.92
NPC1-208ENST00000590301 PPP4CP60510 307 aa9.3□□□□□ -0.92
NPC1-208ENST00000590301 LACTBP83111 547 aaPredicted RBP9.3□□□□□ -0.92
NPC1-208ENST00000590301 NAA16Q6N069 864 aaPredicted RBP9.3□□□□□ -0.92
NPC1-208ENST00000590301 CEP85Q6P2H3 762 aa9.3□□□□□ -0.92
NPC1-208ENST00000590301 TBC1D9Q6ZT07 1266 aa9.3□□□□□ -0.92
NPC1-208ENST00000590301 NBPF11Q86T75 865 aa9.3□□□□□ -0.92
NPC1-208ENST00000590301 DBNDD2Q9BQY9 259 aa9.3□□□□□ -0.92
NPC1-208ENST00000590301 OSBPL5Q9H0X9 879 aaPredicted RBP9.3□□□□□ -0.92
NPC1-208ENST00000590301 DHX36Q9H2U1 1008 aaKnown RBP9.3□□□□□ -0.92
NPC1-208ENST00000590301 DDX4Q9NQI0 724 aaKnown RBP9.3□□□□□ -0.92
NPC1-208ENST00000590301 HERC5Q9UII4 1024 aaKnown RBP9.3□□□□□ -0.92
NPC1-208ENST00000590301 ZHX2Q9Y6X8 837 aa9.3□□□□□ -0.92
NPC1-208ENST00000590301 AKAP11Q9UKA4 1901 aa9.29□□□□□ -0.92
NPC1-208ENST00000590301 A0A0G2JLL6 359 aaPredicted RBP9.29□□□□□ -0.92
NPC1-208ENST00000590301 DDTLA6NHG4 134 aaPredicted RBP9.29□□□□□ -0.92
NPC1-208ENST00000590301 HMMRO75330 724 aa9.29□□□□□ -0.92
NPC1-208ENST00000590301 HOXD10P28358 340 aa9.29□□□□□ -0.92
NPC1-208ENST00000590301 MOGSQ13724 837 aa9.29□□□□□ -0.92
NPC1-208ENST00000590301 C17orf99Q6UX52 265 aa9.29□□□□□ -0.92
NPC1-208ENST00000590301 PRRT2Q7Z6L0 340 aaPredicted RBP9.29□□□□□ -0.92
NPC1-208ENST00000590301 RPAP2Q8IXW5 612 aaPredicted RBP9.29□□□□□ -0.92
NPC1-208ENST00000590301 TEX11Q8IYF3 940 aa9.29□□□□□ -0.92
NPC1-208ENST00000590301 C1orf115Q9H7X2 142 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms