RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 MAP3K9P80192 1104 aa17.05■□□□□ 0.32
SCAMP4-212ENST00000590266 VGLL4Q14135 290 aa17.05■□□□□ 0.32
SCAMP4-212ENST00000590266 ANKRD45Q5TZF3 282 aa17.05■□□□□ 0.32
SCAMP4-212ENST00000590266 SPRYD7Q5W111 196 aa17.05■□□□□ 0.32
SCAMP4-212ENST00000590266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.05■□□□□ 0.32
SCAMP4-212ENST00000590266 ZNF341Q9BYN7 854 aa17.05■□□□□ 0.32
SCAMP4-212ENST00000590266 ECHDC1Q9NTX5 307 aa17.05■□□□□ 0.32
SCAMP4-212ENST00000590266 RFX7Q2KHR2 1363 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 THSD7BQ9C0I4 1608 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 DDTLA6NHG4 134 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 PLCG2P16885 1265 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 AAMPQ13685 434 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 SLC9C2Q5TAH2 1124 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 SH3BP5LQ7L8J4 393 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 MAPKAPK5Q8IW41 473 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 TGFBRAP1Q8WUH2 860 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 ZKSCAN4Q969J2 545 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 OPTNQ96CV9 577 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 HAUS7Q99871 368 aa17.04■□□□□ 0.32
SCAMP4-212ENST00000590266 SLURP2P0DP57 97 aa17.03■□□□□ 0.32
SCAMP4-212ENST00000590266 HDAC1Q13547 482 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-212ENST00000590266 SLC4A8Q2Y0W8 1093 aa17.03■□□□□ 0.32
SCAMP4-212ENST00000590266 OTUD7AQ8TE49 926 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-212ENST00000590266 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
SCAMP4-212ENST00000590266 ABHD8Q96I13 439 aa17.03■□□□□ 0.32
SCAMP4-212ENST00000590266 RWDD1Q9H446 243 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-212ENST00000590266 ZNF532Q9HCE3 1301 aa17.02■□□□□ 0.32
SCAMP4-212ENST00000590266 TRPA1O75762 1119 aa17.02■□□□□ 0.32
SCAMP4-212ENST00000590266 MAP4K4O95819 1239 aaPredicted RBP17.02■□□□□ 0.32
SCAMP4-212ENST00000590266 PDE6AP16499 860 aa17.02■□□□□ 0.32
SCAMP4-212ENST00000590266 INPP5BP32019 993 aa17.02■□□□□ 0.32
SCAMP4-212ENST00000590266 B4GALNT3Q6L9W6 998 aa17.02■□□□□ 0.32
SCAMP4-212ENST00000590266 GCC1Q96CN9 775 aa17.02■□□□□ 0.32
SCAMP4-212ENST00000590266 OTUD5Q96G74 571 aa17.02■□□□□ 0.32
SCAMP4-212ENST00000590266 OSBPL5Q9H0X9 879 aaPredicted RBP17.02■□□□□ 0.32
SCAMP4-212ENST00000590266 UNCXA6NJT0 531 aa17.01■□□□□ 0.31
SCAMP4-212ENST00000590266 FAM196BA6NMK8 535 aa17.01■□□□□ 0.31
SCAMP4-212ENST00000590266 GJA5P36382 358 aa17.01■□□□□ 0.31
SCAMP4-212ENST00000590266 USP5P45974 858 aa17.01■□□□□ 0.31
SCAMP4-212ENST00000590266 PPP4CP60510 307 aa17.01■□□□□ 0.31
SCAMP4-212ENST00000590266 SREBF2Q12772 1141 aa17.01■□□□□ 0.31
SCAMP4-212ENST00000590266 SLFNL1Q499Z3 407 aa17.01■□□□□ 0.31
SCAMP4-212ENST00000590266 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCAMP4-212ENST00000590266 RNF186Q9NXI6 227 aa17.01■□□□□ 0.31
SCAMP4-212ENST00000590266 SAP30BPQ9UHR5 308 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-212ENST00000590266 FLT1P17948 1338 aa17■□□□□ 0.31
SCAMP4-212ENST00000590266 MAST2Q6P0Q8 1798 aa17■□□□□ 0.31
SCAMP4-212ENST00000590266 MAGEB6P1A0A0J9YX57 407 aa17■□□□□ 0.31
SCAMP4-212ENST00000590266 IGSF3O75054 1194 aa17■□□□□ 0.31
SCAMP4-212ENST00000590266 ZBTB48P10074 688 aaPredicted RBP17■□□□□ 0.31
SCAMP4-212ENST00000590266 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17■□□□□ 0.31
SCAMP4-212ENST00000590266 SNCAIPQ9Y6H5 919 aa17■□□□□ 0.31
SCAMP4-212ENST00000590266 MYH2Q9UKX2 1941 aa17■□□□□ 0.31
SCAMP4-212ENST00000590266 MANSC4A6NHS7 340 aaPredicted RBP16.99■□□□□ 0.31
SCAMP4-212ENST00000590266 CCDC85CA6NKD9 419 aa16.99■□□□□ 0.31
SCAMP4-212ENST00000590266 IGHDP01880 384 aa16.99■□□□□ 0.31
SCAMP4-212ENST00000590266 CHGBP05060 677 aa16.99■□□□□ 0.31
SCAMP4-212ENST00000590266 MX1P20591 662 aa16.99■□□□□ 0.31
SCAMP4-212ENST00000590266 REM2Q8IYK8 340 aaPredicted RBP16.99■□□□□ 0.31
SCAMP4-212ENST00000590266 AKAP11Q9UKA4 1901 aa16.98■□□□□ 0.31
SCAMP4-212ENST00000590266 ERC2O15083 957 aa16.98■□□□□ 0.31
SCAMP4-212ENST00000590266 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
SCAMP4-212ENST00000590266 CERS3Q8IU89 383 aa16.98■□□□□ 0.31
SCAMP4-212ENST00000590266 TRIM34Q9BYJ4 488 aa16.98■□□□□ 0.31
SCAMP4-212ENST00000590266 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
SCAMP4-212ENST00000590266 SAGE1Q9NXZ1 904 aa16.98■□□□□ 0.31
SCAMP4-212ENST00000590266 PALD1Q9ULE6 856 aa16.98■□□□□ 0.31
SCAMP4-212ENST00000590266 ATRNL1Q5VV63 1379 aa16.98■□□□□ 0.31
SCAMP4-212ENST00000590266 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 TCRBV5S4A2TA0A5A2 114 aa16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 SPDYE5A6NIY4 337 aa16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 TBC1D8O95759 1140 aa16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 ADD2P35612 726 aa16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 DGKZQ13574 1117 aa16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 ERO1BQ86YB8 467 aa16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 CRACR2BQ8N4Y2 399 aaPredicted RBP16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 RIOK1Q9BRS2 568 aaKnown RBP16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 ARMT1Q9H993 441 aa16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 PICK1Q9NRD5 415 aa16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 ZNF112Q9UJU3 913 aa16.97■□□□□ 0.31
SCAMP4-212ENST00000590266 MBD4O95243 580 aa16.96■□□□□ 0.31
SCAMP4-212ENST00000590266 TM4SF4P48230 202 aa16.96■□□□□ 0.31
SCAMP4-212ENST00000590266 ZSCAN25Q6NSZ9 544 aa16.96■□□□□ 0.31
SCAMP4-212ENST00000590266 TMED8Q6PL24 325 aaPredicted RBP16.96■□□□□ 0.31
SCAMP4-212ENST00000590266 LCORLQ8N3X6 602 aa16.96■□□□□ 0.31
SCAMP4-212ENST00000590266 PI4K2BQ8TCG2 481 aa16.96■□□□□ 0.31
SCAMP4-212ENST00000590266 CRNKL1Q9BZJ0 848 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-212ENST00000590266 DHX36Q9H2U1 1008 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-212ENST00000590266 CCL15-CCL14A0A0B4J2E2 113 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 PHF20L1A8MW92 1017 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 IRF6O14896 467 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 GLRX3O76003 335 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 HLA-DOAP06340 250 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 GTF2A2P52657 109 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 CCL15Q16663 113 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 IFNL1Q8IU54 200 aa16.95■□□□□ 0.3
SCAMP4-212ENST00000590266 SCYL3Q8IZE3 742 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms