RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 FOXP2O15409 715 aa18.15■□□□□ 0.5
ATG4D-211ENST00000589753 ENTPD3O75355 529 aa18.15■□□□□ 0.5
ATG4D-211ENST00000589753 REC8O95072 547 aa18.15■□□□□ 0.5
ATG4D-211ENST00000589753 TNNI2P48788 182 aa18.15■□□□□ 0.5
ATG4D-211ENST00000589753 TCP10Q12799 353 aa18.15■□□□□ 0.5
ATG4D-211ENST00000589753 IFNL3Q8IZI9 196 aa18.15■□□□□ 0.5
ATG4D-211ENST00000589753 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
ATG4D-211ENST00000589753 MKRN1Q9UHC7 482 aaKnown RBP18.15■□□□□ 0.5
ATG4D-211ENST00000589753 PGAP2Q9UHJ9 254 aa18.15■□□□□ 0.5
ATG4D-211ENST00000589753 CLEC11AQ9Y240 323 aa18.15■□□□□ 0.5
ATG4D-211ENST00000589753 TDO2P48775 406 aa18.14■□□□□ 0.49
ATG4D-211ENST00000589753 PTH1RQ03431 593 aa18.14■□□□□ 0.49
ATG4D-211ENST00000589753 FAM83AQ86UY5 434 aa18.14■□□□□ 0.49
ATG4D-211ENST00000589753 LSG1Q9H089 658 aaKnown RBP18.14■□□□□ 0.49
ATG4D-211ENST00000589753 OSBPL5Q9H0X9 879 aaPredicted RBP18.14■□□□□ 0.49
ATG4D-211ENST00000589753 CNTNAP1P78357 1384 aa18.14■□□□□ 0.49
ATG4D-211ENST00000589753 NAV1Q8NEY1 1877 aa18.14■□□□□ 0.49
ATG4D-211ENST00000589753 POTEIP0CG38 1075 aa18.13■□□□□ 0.49
ATG4D-211ENST00000589753 POTEJP0CG39 1038 aa18.13■□□□□ 0.49
ATG4D-211ENST00000589753 ALX1Q15699 326 aa18.13■□□□□ 0.49
ATG4D-211ENST00000589753 FAM151AQ8WW52 585 aa18.13■□□□□ 0.49
ATG4D-211ENST00000589753 MAP4K1Q92918 833 aa18.13■□□□□ 0.49
ATG4D-211ENST00000589753 NAPBQ9H115 298 aa18.13■□□□□ 0.49
ATG4D-211ENST00000589753 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
ATG4D-211ENST00000589753 SCAF8Q9UPN6 1271 aaKnown RBP18.13■□□□□ 0.49
ATG4D-211ENST00000589753 FGAP02671 866 aa18.12■□□□□ 0.49
ATG4D-211ENST00000589753 RASA3Q14644 834 aa18.12■□□□□ 0.49
ATG4D-211ENST00000589753 LDHDQ86WU2 507 aa18.12■□□□□ 0.49
ATG4D-211ENST00000589753 SULF1Q8IWU6 871 aa18.12■□□□□ 0.49
ATG4D-211ENST00000589753 ZFPM1Q8IX07 1006 aa18.12■□□□□ 0.49
ATG4D-211ENST00000589753 AMOTL1Q8IY63 956 aa18.12■□□□□ 0.49
ATG4D-211ENST00000589753 DEFB129Q9H1M3 183 aa18.12■□□□□ 0.49
ATG4D-211ENST00000589753 ARPP21Q9UBL0 812 aaPredicted RBP18.12■□□□□ 0.49
ATG4D-211ENST00000589753 SAP30BPQ9UHR5 308 aaKnown RBP18.12■□□□□ 0.49
ATG4D-211ENST00000589753 ZMYM6O95789 1325 aa18.12■□□□□ 0.49
ATG4D-211ENST00000589753 USP17L12C9JPN9 530 aa18.11■□□□□ 0.49
ATG4D-211ENST00000589753 USP17L21D6R901 530 aa18.11■□□□□ 0.49
ATG4D-211ENST00000589753 SEC24BO95487 1268 aa18.11■□□□□ 0.49
ATG4D-211ENST00000589753 POLR3DP05423 398 aaPredicted RBP18.11■□□□□ 0.49
ATG4D-211ENST00000589753 CTR9Q6PD62 1173 aa18.11■□□□□ 0.49
ATG4D-211ENST00000589753 KRT26Q7Z3Y9 468 aa18.11■□□□□ 0.49
ATG4D-211ENST00000589753 ZSCAN29Q8IWY8 852 aaPredicted RBP18.11■□□□□ 0.49
ATG4D-211ENST00000589753 TMEM39BQ9GZU3 492 aa18.11■□□□□ 0.49
ATG4D-211ENST00000589753 DHX36Q9H2U1 1008 aaKnown RBP18.11■□□□□ 0.49
ATG4D-211ENST00000589753 CTNNA3Q9UI47 895 aa18.11■□□□□ 0.49
ATG4D-211ENST00000589753 PALD1Q9ULE6 856 aa18.11■□□□□ 0.49
ATG4D-211ENST00000589753 PPP2R3BQ9Y5P8 575 aa18.11■□□□□ 0.49
ATG4D-211ENST00000589753 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
ATG4D-211ENST00000589753 COL2A1P02458 1487 aaPredicted RBP18.11■□□□□ 0.49
ATG4D-211ENST00000589753 DDX60LQ5H9U9 1706 aaKnown RBP18.11■□□□□ 0.49
ATG4D-211ENST00000589753 ATRNL1Q5VV63 1379 aa18.1■□□□□ 0.49
ATG4D-211ENST00000589753 DDTLA6NHG4 134 aaPredicted RBP18.1■□□□□ 0.49
ATG4D-211ENST00000589753 EPB41L2O43491 1005 aaKnown RBP18.1■□□□□ 0.49
ATG4D-211ENST00000589753 SBK1Q52WX2 424 aa18.1■□□□□ 0.49
ATG4D-211ENST00000589753 BACH2Q9BYV9 841 aa18.1■□□□□ 0.49
ATG4D-211ENST00000589753 RBM8AQ9Y5S9 174 aaKnown RBP18.1■□□□□ 0.49
ATG4D-211ENST00000589753 MYH1P12882 1939 aa18.1■□□□□ 0.49
ATG4D-211ENST00000589753 BAZ2AQ9UIF9 1905 aaKnown RBP18.1■□□□□ 0.49
ATG4D-211ENST00000589753 MINDY4BA8MYZ0 360 aa18.09■□□□□ 0.49
ATG4D-211ENST00000589753 ADM5C9JUS6 153 aa18.09■□□□□ 0.49
ATG4D-211ENST00000589753 HLA-DOAP06340 250 aa18.09■□□□□ 0.49
ATG4D-211ENST00000589753 SLC4A8Q2Y0W8 1093 aa18.09■□□□□ 0.49
ATG4D-211ENST00000589753 C12orf60Q5U649 245 aa18.09■□□□□ 0.49
ATG4D-211ENST00000589753 MAP1SQ66K74 1059 aaPredicted RBP18.09■□□□□ 0.49
ATG4D-211ENST00000589753 CDC37L1Q7L3B6 337 aa18.09■□□□□ 0.49
ATG4D-211ENST00000589753 SH3BP5LQ7L8J4 393 aa18.09■□□□□ 0.49
ATG4D-211ENST00000589753 TTC6Q86TZ1 520 aa18.09■□□□□ 0.49
ATG4D-211ENST00000589753 CYP2D7A0A087X1C5 515 aa18.08■□□□□ 0.48
ATG4D-211ENST00000589753 KIF3CO14782 793 aa18.08■□□□□ 0.48
ATG4D-211ENST00000589753 CYP2D6P10635 497 aa18.08■□□□□ 0.48
ATG4D-211ENST00000589753 IMMTQ16891 758 aaKnown RBP18.08■□□□□ 0.48
ATG4D-211ENST00000589753 USP48Q86UV5 1035 aa18.08■□□□□ 0.48
ATG4D-211ENST00000589753 ZNF784Q8NCA9 323 aaPredicted RBP18.08■□□□□ 0.48
ATG4D-211ENST00000589753 TEPSINQ96N21 525 aa18.08■□□□□ 0.48
ATG4D-211ENST00000589753 CSRNP1Q96S65 589 aa18.08■□□□□ 0.48
ATG4D-211ENST00000589753 USP26Q9BXU7 913 aa18.08■□□□□ 0.48
ATG4D-211ENST00000589753 GLIS2Q9BZE0 524 aaPredicted RBP18.08■□□□□ 0.48
ATG4D-211ENST00000589753 LAMB1P07942 1786 aa18.07■□□□□ 0.48
ATG4D-211ENST00000589753 ZNF213O14771 459 aa18.07■□□□□ 0.48
ATG4D-211ENST00000589753 PLCD1P51178 756 aa18.07■□□□□ 0.48
ATG4D-211ENST00000589753 PPARAQ07869 468 aa18.07■□□□□ 0.48
ATG4D-211ENST00000589753 NECTIN1Q15223 517 aa18.07■□□□□ 0.48
ATG4D-211ENST00000589753 CHADLQ6NUI6 762 aa18.07■□□□□ 0.48
ATG4D-211ENST00000589753 PI4KBQ9UBF8 816 aa18.07■□□□□ 0.48
ATG4D-211ENST00000589753 POLR2AP24928 1970 aaKnown RBP18.06■□□□□ 0.48
ATG4D-211ENST00000589753 HAND2P61296 217 aa18.06■□□□□ 0.48
ATG4D-211ENST00000589753 PRAMEF18Q5VWM3 479 aa18.06■□□□□ 0.48
ATG4D-211ENST00000589753 CDAN1Q8IWY9 1227 aa18.06■□□□□ 0.48
ATG4D-211ENST00000589753 EHD4Q9H223 541 aa18.06■□□□□ 0.48
ATG4D-211ENST00000589753 SLC3A2P08195 630 aaKnown RBP18.05■□□□□ 0.48
ATG4D-211ENST00000589753 MCCP23508 829 aa18.05■□□□□ 0.48
ATG4D-211ENST00000589753 EVX2Q03828 476 aa18.05■□□□□ 0.48
ATG4D-211ENST00000589753 NBPF12Q5TAG4 269 aaPredicted RBP18.05■□□□□ 0.48
ATG4D-211ENST00000589753 RNF20Q5VTR2 975 aa18.05■□□□□ 0.48
ATG4D-211ENST00000589753 CREB3L3Q68CJ9 461 aa18.05■□□□□ 0.48
ATG4D-211ENST00000589753 FOXP4Q8IVH2 680 aaPredicted RBP18.05■□□□□ 0.48
ATG4D-211ENST00000589753 HOOK2Q96ED9 719 aa18.05■□□□□ 0.48
ATG4D-211ENST00000589753 UPF2Q9HAU5 1272 aaKnown RBP18.05■□□□□ 0.48
ATG4D-211ENST00000589753 ANAPC4Q9UJX5 808 aa18.05■□□□□ 0.48
ATG4D-211ENST00000589753 LAMA4Q16363 1823 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms