RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PPANQ9NQ55 473 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 TEX14Q8IWB6 1497 aa16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 GSPT1P15170 499 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 RBM6P78332 1123 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 ICE2Q659A1 982 aa16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 FERMT2Q96AC1 680 aa16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 TRMT112Q9UI30 125 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 STX10O60499 249 aa16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 ARID4AP29374 1257 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 GKAP1Q5VSY0 366 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 AMOTL2Q9Y2J4 779 aa16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 HIP1RO75146 1068 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 GNAT2P19087 354 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 PLCD1P51178 756 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 PPP4R3AQ6IN85 833 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 CDC23Q9UJX2 597 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 ERBB4Q15303 1308 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 ATP5J2-PTCD1G3V325 749 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 POLR2DO15514 142 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 PTCD1O75127 700 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 ZSCAN29Q8IWY8 852 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 MCUR1Q96AQ8 359 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 GBP5Q96PP8 586 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 HDAC9Q9UKV0 1011 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 MAGEA1P43355 309 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 ADKP55263 362 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 MCTP2Q6DN12 878 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 CERS3Q8IU89 383 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 CCDC151A5D8V7 595 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 KRT79Q5XKE5 535 aa16.34■□□□□ 0.21
SMARCA4-214ENST00000589677 MAGEA9P43362 315 aa16.33■□□□□ 0.21
SMARCA4-214ENST00000589677 TRIM58Q8NG06 486 aa16.33■□□□□ 0.21
SMARCA4-214ENST00000589677 TBC1D31Q96DN5 1066 aa16.33■□□□□ 0.21
SMARCA4-214ENST00000589677 ATP6V0A2Q9Y487 856 aa16.33■□□□□ 0.21
SMARCA4-214ENST00000589677 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.21
SMARCA4-214ENST00000589677 SLC4A4Q9Y6R1 1079 aa16.33■□□□□ 0.21
SMARCA4-214ENST00000589677 SEC31AO94979 1220 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 CLCN6P51797 869 aa16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 ZC3H6P61129 1189 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 SLC9C2Q5TAH2 1124 aa16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 CABP5Q9NP86 173 aa16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 PRDM11Q9NQV5 511 aa16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 ANXA1P04083 346 aa16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 ME3Q16798 604 aa16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 KRT71Q3SY84 523 aa16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 SLFNL1Q499Z3 407 aa16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 ARHGEF2Q92974 986 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 CRNKL1Q9BZJ0 848 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 TRAPPC8Q9Y2L5 1435 aa16.33■□□□□ 0.2
SMARCA4-214ENST00000589677 SNRPA1P09661 255 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 MCM7P33993 719 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 SLC9C1Q4G0N8 1177 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 SLF2Q8IX21 1173 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 ZNF526Q8TF50 670 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 TMEM87BQ96K49 555 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 TMEM110-MUSTN1A8MSY1 372 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 HAUS4Q9H6D7 363 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 ATP2B3Q16720 1220 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 VWA3AA6NCI4 1184 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 MYO1CO00159 1063 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 RNF40O75150 1001 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 ZNF365Q70YC5 407 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 CACTINQ8WUQ7 758 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 VAT1LQ9HCJ6 419 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 C6orf50Q9HD87 102 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 ABCC10Q5T3U5 1492 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 DEXIO95424 95 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 MAP7Q14244 749 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 CSGALNACT2Q8N6G5 542 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 CCDC63Q8NA47 563 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 GDAP1L1Q96MZ0 367 aa16.32■□□□□ 0.2
SMARCA4-214ENST00000589677 LDHCP07864 332 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 CNNM4Q6P4Q7 775 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 FBXO18Q8NFZ0 1043 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 NCBP1Q09161 790 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 CCDC62Q6P9F0 684 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 ODF2LQ9ULJ1 636 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 RAPGEF1Q13905 1077 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 MMS22LQ6ZRQ5 1243 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 HEATR3Q7Z4Q2 680 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 TTC6Q86TZ1 520 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 TAB2Q9NYJ8 693 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 MYO1AQ9UBC5 1043 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 TNRQ92752 1358 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 FBXO38Q6PIJ6 1188 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 LMBR1LQ6UX01 489 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 OR8K1Q8NGG5 319 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 PHF8Q9UPP1 1060 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 TRIM35Q9UPQ4 493 aa16.31■□□□□ 0.2
SMARCA4-214ENST00000589677 FAM135BQ49AJ0 1406 aa16.3■□□□□ 0.2
SMARCA4-214ENST00000589677 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
SMARCA4-214ENST00000589677 PNMA6AP0CW24 399 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-214ENST00000589677 TRMT2AQ8IZ69 625 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms