RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TICAM2Q86XR7 235 aa25.53■■□□□ 1.68
R3HDM4-204ENST00000589428 TEPSINQ96N21 525 aa25.53■■□□□ 1.68
R3HDM4-204ENST00000589428 RIOK1Q9BRS2 568 aaKnown RBP25.53■■□□□ 1.68
R3HDM4-204ENST00000589428 IL25Q9H293 177 aa25.53■■□□□ 1.68
R3HDM4-204ENST00000589428 DDX4Q9NQI0 724 aaKnown RBP25.53■■□□□ 1.68
R3HDM4-204ENST00000589428 NPM3O75607 178 aaKnown RBP25.52■■□□□ 1.68
R3HDM4-204ENST00000589428 FKBP1BP68106 108 aa25.52■■□□□ 1.68
R3HDM4-204ENST00000589428 SLFNL1Q499Z3 407 aa25.52■■□□□ 1.68
R3HDM4-204ENST00000589428 HOOK2Q96ED9 719 aa25.52■■□□□ 1.68
R3HDM4-204ENST00000589428 FAM227BQ96M60 508 aa25.52■■□□□ 1.68
R3HDM4-204ENST00000589428 ESYT1Q9BSJ8 1104 aa25.52■■□□□ 1.68
R3HDM4-204ENST00000589428 SSC5DA1L4H1 1573 aa25.52■■□□□ 1.68
R3HDM4-204ENST00000589428 HTRA3P83110 453 aa25.51■■□□□ 1.68
R3HDM4-204ENST00000589428 NMIQ13287 307 aaPredicted RBP25.51■■□□□ 1.68
R3HDM4-204ENST00000589428 CWC27Q6UX04 472 aaKnown RBP25.51■■□□□ 1.68
R3HDM4-204ENST00000589428 ZSCAN29Q8IWY8 852 aaPredicted RBP25.51■■□□□ 1.68
R3HDM4-204ENST00000589428 CDAN1Q8IWY9 1227 aa25.51■■□□□ 1.68
R3HDM4-204ENST00000589428 A0A0D9SFI3 127 aa25.51■■□□□ 1.67
R3HDM4-204ENST00000589428 PPP1R12BO60237 982 aaPredicted RBP25.51■■□□□ 1.67
R3HDM4-204ENST00000589428 TGFBRAP1Q8WUH2 860 aa25.51■■□□□ 1.67
R3HDM4-204ENST00000589428 APPBP2Q92624 585 aa25.51■■□□□ 1.67
R3HDM4-204ENST00000589428 AIDAQ96BJ3 306 aa25.51■■□□□ 1.67
R3HDM4-204ENST00000589428 CRNKL1Q9BZJ0 848 aaKnown RBP25.51■■□□□ 1.67
R3HDM4-204ENST00000589428 TLL2Q9Y6L7 1015 aa25.51■■□□□ 1.67
R3HDM4-204ENST00000589428 MBD4O95243 580 aa25.5■■□□□ 1.67
R3HDM4-204ENST00000589428 USP5P45974 858 aa25.5■■□□□ 1.67
R3HDM4-204ENST00000589428 PRKG1Q13976 671 aa25.5■■□□□ 1.67
R3HDM4-204ENST00000589428 OSBPL5Q9H0X9 879 aaPredicted RBP25.5■■□□□ 1.67
R3HDM4-204ENST00000589428 ARMC9Q7Z3E5 817 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 SAPCD2Q86UD0 394 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 MAPKAPK5Q8IW41 473 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 ZFPM1Q8IX07 1006 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 LCORLQ8N3X6 602 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 ARMT1Q9H993 441 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 CDK5RAP2Q96SN8 1893 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 FLT1P17948 1338 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 FOCADQ5VW36 1801 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 COL2A1P02458 1487 aaPredicted RBP25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 SGSM2O43147 1006 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 HUNKP57058 714 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 CSRNP1Q96S65 589 aa25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 PUS7LQ9H0K6 701 aaKnown RBP25.49■■□□□ 1.67
R3HDM4-204ENST00000589428 MFAP1P55081 439 aaKnown RBP25.48■■□□□ 1.67
R3HDM4-204ENST00000589428 ANGEL1Q9UNK9 670 aaKnown RBP25.48■■□□□ 1.67
R3HDM4-204ENST00000589428 ATRNL1Q5VV63 1379 aa25.48■■□□□ 1.67
R3HDM4-204ENST00000589428 ZMYM1Q5SVZ6 1142 aa25.47■■□□□ 1.67
R3HDM4-204ENST00000589428 DCAF15Q66K64 600 aa25.47■■□□□ 1.67
R3HDM4-204ENST00000589428 RUFY2Q8WXA3 655 aa25.47■■□□□ 1.67
R3HDM4-204ENST00000589428 RAD50Q92878 1312 aa25.46■■□□□ 1.67
R3HDM4-204ENST00000589428 RASSF10A6NK89 507 aa25.46■■□□□ 1.67
R3HDM4-204ENST00000589428 IREB2P48200 963 aaKnown RBP25.46■■□□□ 1.67
R3HDM4-204ENST00000589428 MOB2Q70IA6 237 aa25.46■■□□□ 1.67
R3HDM4-204ENST00000589428 OSBP2Q969R2 916 aa25.46■■□□□ 1.67
R3HDM4-204ENST00000589428 SEC62Q99442 399 aaKnown RBP25.46■■□□□ 1.67
R3HDM4-204ENST00000589428 FZD1Q9UP38 647 aa25.46■■□□□ 1.67
R3HDM4-204ENST00000589428 DDTLA6NHG4 134 aaPredicted RBP25.45■■□□□ 1.66
R3HDM4-204ENST00000589428 PAXIP1Q6ZW49 1069 aaPredicted RBP25.45■■□□□ 1.66
R3HDM4-204ENST00000589428 SH3BP5LQ7L8J4 393 aa25.45■■□□□ 1.66
R3HDM4-204ENST00000589428 DHX36Q9H2U1 1008 aaKnown RBP25.45■■□□□ 1.66
R3HDM4-204ENST00000589428 NAV1Q8NEY1 1877 aa25.44■■□□□ 1.66
R3HDM4-204ENST00000589428 DEFB115Q30KQ5 88 aa25.44■■□□□ 1.66
R3HDM4-204ENST00000589428 HHIPL1Q96JK4 782 aa25.44■■□□□ 1.66
R3HDM4-204ENST00000589428 UBE2Q2LH0YL09 131 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 MAP3K11Q16584 847 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 ZNF589Q86UQ0 364 aaPredicted RBP25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 SDR42E1Q8WUS8 393 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 TSHZ2Q9NRE2 1034 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 HELLSQ9NRZ9 838 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 MKRN1Q9UHC7 482 aaKnown RBP25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 M0R2C6 588 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 GPAA1O43292 621 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 REC8O95072 547 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 MIGA2Q7L4E1 593 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 DDRGK1Q96HY6 314 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 ZNF341Q9BYN7 854 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 SAP30BPQ9UHR5 308 aaKnown RBP25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 SLC4A4Q9Y6R1 1079 aa25.43■■□□□ 1.66
R3HDM4-204ENST00000589428 USP2O75604 605 aaPredicted RBP25.42■■□□□ 1.66
R3HDM4-204ENST00000589428 HLA-DOAP06340 250 aa25.42■■□□□ 1.66
R3HDM4-204ENST00000589428 MCMDC2Q4G0Z9 681 aa25.42■■□□□ 1.66
R3HDM4-204ENST00000589428 EIF5BO60841 1220 aaKnown RBP25.41■■□□□ 1.66
R3HDM4-204ENST00000589428 CCDC129Q6ZRS4 1044 aa25.41■■□□□ 1.66
R3HDM4-204ENST00000589428 STRBPQ96SI9 672 aaKnown RBP25.41■■□□□ 1.66
R3HDM4-204ENST00000589428 ANO2Q9NQ90 1003 aa25.41■■□□□ 1.66
R3HDM4-204ENST00000589428 ATP8A2Q9NTI2 1148 aa25.41■■□□□ 1.66
R3HDM4-204ENST00000589428 PALD1Q9ULE6 856 aa25.41■■□□□ 1.66
R3HDM4-204ENST00000589428 PRKAB2O43741 272 aa25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 RGMBQ6NW40 437 aa25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 DCP1AQ9NPI6 582 aaPredicted RBP25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 PI4KBQ9UBF8 816 aa25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 DDX60LQ5H9U9 1706 aaKnown RBP25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 MYH1P12882 1939 aa25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 GNAT2P19087 354 aa25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 ANKRD13AQ8IZ07 590 aa25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 KLRG1Q96E93 195 aa25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 WRNIP1Q96S55 665 aa25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 MCM9Q9NXL9 1143 aa25.4■■□□□ 1.66
R3HDM4-204ENST00000589428 CCDC171Q6TFL3 1326 aa25.39■■□□□ 1.66
R3HDM4-204ENST00000589428 UNCXA6NJT0 531 aa25.39■■□□□ 1.65
R3HDM4-204ENST00000589428 ECE1P42892 770 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms