RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 BRAPQ7Z569 592 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 DZIP3Q86Y13 1208 aaKnown RBP8.62□□□□□ -1.03
ZNF540-206ENST00000589117 DRC7Q8IY82 874 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 CKAP2LQ8IYA6 745 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 PRR7Q8TB68 274 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 LPIN2Q92539 896 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 C8orf76Q96K31 380 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 ALG2Q9H553 416 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 USTQ9Y2C2 406 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 CHAF1AQ13111 956 aaPredicted RBP8.62□□□□□ -1.03
ZNF540-206ENST00000589117 NOLC1Q14978 699 aaKnown RBP eCLIP8.62□□□□□ -1.03
ZNF540-206ENST00000589117 PUM3Q15397 648 aaKnown RBP8.62□□□□□ -1.03
ZNF540-206ENST00000589117 ANO6Q4KMQ2 910 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.62□□□□□ -1.03
ZNF540-206ENST00000589117 CCAR1Q8IX12 1150 aaKnown RBP8.62□□□□□ -1.03
ZNF540-206ENST00000589117 KCNG4Q8TDN1 519 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 MPHOSPH8Q99549 860 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 TMEM134Q9H6X4 195 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 GREM2Q9H772 168 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 MRVI1Q9Y6F6 885 aa8.62□□□□□ -1.03
ZNF540-206ENST00000589117 BCL9O00512 1426 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 KLF18A0A0U1RQI7 1052 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 GOLGA8BA8MQT2 603 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 IDH1O75874 414 aaKnown RBP8.61□□□□□ -1.03
ZNF540-206ENST00000589117 CTDNEP1O95476 244 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 SLC5A1P13866 664 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 ADD2P35612 726 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 CEBPZQ03701 1054 aaKnown RBP8.61□□□□□ -1.03
ZNF540-206ENST00000589117 FAM160A1Q05DH4 1040 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 MAP3K12Q12852 859 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 HLFQ16534 295 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 GLIPR1L2Q4G1C9 344 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 TTLL5Q6EMB2 1281 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 TSC1Q92574 1164 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 AIDAQ96BJ3 306 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 PGBD1Q96JS3 809 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 PRIMPOLQ96LW4 560 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 NCOA5Q9HCD5 579 aaKnown RBP8.61□□□□□ -1.03
ZNF540-206ENST00000589117 TJP1Q07157 1748 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 CARMIL3Q8ND23 1372 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 XIRP1Q702N8 1843 aaKnown RBP8.61□□□□□ -1.03
ZNF540-206ENST00000589117 SALL1Q9NSC2 1324 aa8.61□□□□□ -1.03
ZNF540-206ENST00000589117 BECN2A8MW95 431 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 HAND2P61296 217 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 STX1AQ16623 288 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 SLFNL1Q499Z3 407 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 PARP10Q53GL7 1025 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 ARSIQ5FYB1 569 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 ADALQ6DHV7 355 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 CHST3Q7LGC8 479 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 MTERF4Q7Z6M4 381 aaKnown RBP8.6□□□□□ -1.03
ZNF540-206ENST00000589117 RDH13Q8NBN7 331 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 TMEM87BQ96K49 555 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 MAP7D2Q96T17 732 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 TRIM5Q9C035 493 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 PUS7LQ9H0K6 701 aaKnown RBP8.6□□□□□ -1.03
ZNF540-206ENST00000589117 ANO10Q9NW15 660 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 RTEL1Q9NZ71 1219 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 ORC3Q9UBD5 711 aaPredicted RBP8.6□□□□□ -1.03
ZNF540-206ENST00000589117 ANGEL1Q9UNK9 670 aaKnown RBP8.6□□□□□ -1.03
ZNF540-206ENST00000589117 DYNC1I1O14576 645 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 HOXA2O43364 376 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 MCAMP43121 646 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 STK38Q15208 465 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 CCDC102BQ68D86 513 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 SULF1Q8IWU6 871 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 FBXO18Q8NFZ0 1043 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 SDF4Q9BRK5 362 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 NACAP1Q9BZK3 213 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 CNNM2Q9H8M5 875 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 CBX8Q9HC52 389 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 PRM3Q9NNZ6 103 aa8.6□□□□□ -1.03
ZNF540-206ENST00000589117 A0A1W2PQ27 194 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 A0A1W2PQ64 194 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 A0A1W2PQD8 194 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 YEATS4O95619 227 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 GNAT2P19087 354 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 ARID4AP29374 1257 aaPredicted RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 ADD1P35611 737 aaKnown RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 GNL2Q13823 731 aaKnown RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 TRIM29Q14134 588 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 SCARF1Q14162 830 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 LUZP1Q86V48 1076 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 MB21D2Q8IYB1 491 aaPredicted RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 ZNF34Q8IZ26 560 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 JMYQ8N9B5 988 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 TDRD7Q8NHU6 1098 aaKnown RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 MRPS27Q92552 414 aaKnown RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 TTC12Q9H892 705 aaPredicted RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 THRAP3Q9Y2W1 955 aaKnown RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 CFAP99D6REC4 459 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 IGHMBP2P38935 993 aaKnown RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 SART3Q15020 963 aaKnown RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 ALX1Q15699 326 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 CCDC152Q4G0S7 254 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 VGLL2Q8N8G2 317 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 USP28Q96RU2 1077 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 UTP14AQ9BVJ6 771 aaKnown RBP8.59□□□□□ -1.03
ZNF540-206ENST00000589117 METRNQ9UJH8 293 aa8.59□□□□□ -1.03
ZNF540-206ENST00000589117 ZBTB1Q9Y2K1 713 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms