RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 CXCL11O14625 94 aa10.7□□□□□ -0.7
RETREG3-207ENST00000589007 TREML2Q5T2D2 321 aa10.7□□□□□ -0.7
RETREG3-207ENST00000589007 LHX8Q68G74 356 aa10.7□□□□□ -0.7
RETREG3-207ENST00000589007 SH3BP5LQ7L8J4 393 aa10.7□□□□□ -0.7
RETREG3-207ENST00000589007 ZFPM1Q8IX07 1006 aa10.7□□□□□ -0.7
RETREG3-207ENST00000589007 MYLIPQ8WY64 445 aa10.7□□□□□ -0.7
RETREG3-207ENST00000589007 KAZALD1Q96I82 304 aa10.7□□□□□ -0.7
RETREG3-207ENST00000589007 MRIQ9BWK5 157 aa10.7□□□□□ -0.7
RETREG3-207ENST00000589007 PUS3Q9BZE2 481 aaKnown RBP10.7□□□□□ -0.7
RETREG3-207ENST00000589007 IQSEC3Q9UPP2 1182 aaPredicted RBP10.7□□□□□ -0.7
RETREG3-207ENST00000589007 ZNF236Q9UL36 1845 aa10.7□□□□□ -0.7
RETREG3-207ENST00000589007 PTPRAP18433 802 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 MAP3K10Q02779 954 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 UBE4AQ14139 1066 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 FAM110CQ1W6H9 321 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 C9orf50Q5SZB4 431 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 DCAF15Q66K64 600 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 POTEEQ6S8J3 1075 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 CCDC84Q86UT8 332 aaPredicted RBP10.69□□□□□ -0.7
RETREG3-207ENST00000589007 FAM151AQ8WW52 585 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 TEKT1Q969V4 418 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 SEMA6BQ9H3T3 888 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 DAGLAQ9Y4D2 1042 aa10.69□□□□□ -0.7
RETREG3-207ENST00000589007 A0A0G2JMZ2 1700 aa10.68□□□□□ -0.7
RETREG3-207ENST00000589007 HIBADHP31937 336 aaKnown RBP10.68□□□□□ -0.7
RETREG3-207ENST00000589007 CCDC30Q5VVM6 783 aa10.68□□□□□ -0.7
RETREG3-207ENST00000589007 ANKRD13CQ8N6S4 541 aa10.68□□□□□ -0.7
RETREG3-207ENST00000589007 LINS1Q8NG48 757 aa10.68□□□□□ -0.7
RETREG3-207ENST00000589007 TNFRSF10AO00220 468 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 PEX10O60683 326 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 IFIT5Q13325 482 aaKnown RBP10.67□□□□□ -0.7
RETREG3-207ENST00000589007 ZNF697Q5TEC3 545 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 CDC42EP5Q6NZY7 148 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 HHIPL2Q6UWX4 724 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 LMBR1LQ6UX01 489 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 SCYL3Q8IZE3 742 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 USP6NLQ92738 828 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 ADAMTS8Q9UP79 889 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 AGTPBP1Q9UPW5 1226 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 PIEZO1Q92508 2521 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 PLXNA1Q9UIW2 1896 aa10.67□□□□□ -0.7
RETREG3-207ENST00000589007 SYNGAP1Q96PV0 1343 aa10.66□□□□□ -0.7
RETREG3-207ENST00000589007 GNAI1P63096 354 aa10.66□□□□□ -0.7
RETREG3-207ENST00000589007 NEXNQ0ZGT2 675 aa10.66□□□□□ -0.7
RETREG3-207ENST00000589007 FLIIQ13045 1269 aa10.66□□□□□ -0.7
RETREG3-207ENST00000589007 DNAAF4Q8WXU2 420 aa10.66□□□□□ -0.7
RETREG3-207ENST00000589007 TCF20Q9UGU0 1960 aaKnown RBP10.65□□□□□ -0.7
RETREG3-207ENST00000589007 PLIN1O60240 522 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 IGHA2P01877 340 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 PRKAR2AP13861 404 aaKnown RBP10.65□□□□□ -0.7
RETREG3-207ENST00000589007 CCND3P30281 292 aaPredicted RBP10.65□□□□□ -0.7
RETREG3-207ENST00000589007 TCP10Q12799 353 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 CHAF1AQ13111 956 aaPredicted RBP10.65□□□□□ -0.7
RETREG3-207ENST00000589007 SHHQ15465 462 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 DIXDC1Q155Q3 683 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 TJAP1Q5JTD0 557 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 BEND3Q5T5X7 828 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 LDHAL6AQ6ZMR3 332 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 TSR2Q969E8 191 aaKnown RBP10.65□□□□□ -0.7
RETREG3-207ENST00000589007 HOOK2Q96ED9 719 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 HMX1Q9NP08 348 aaPredicted RBP10.65□□□□□ -0.7
RETREG3-207ENST00000589007 MORF4L1Q9UBU8 362 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 ZHX2Q9Y6X8 837 aa10.65□□□□□ -0.7
RETREG3-207ENST00000589007 PARP14Q460N5 1801 aa10.65□□□□□ -0.71
RETREG3-207ENST00000589007 FGFR2P21802 821 aa10.64□□□□□ -0.71
RETREG3-207ENST00000589007 CACNB2Q08289 660 aaPredicted RBP10.64□□□□□ -0.71
RETREG3-207ENST00000589007 RRP1BQ14684 758 aaKnown RBP10.64□□□□□ -0.71
RETREG3-207ENST00000589007 GADL1Q6ZQY3 521 aa10.64□□□□□ -0.71
RETREG3-207ENST00000589007 TBC1D22AQ8WUA7 517 aa10.64□□□□□ -0.71
RETREG3-207ENST00000589007 TXNRD2Q9NNW7 524 aa10.64□□□□□ -0.71
RETREG3-207ENST00000589007 DDX4Q9NQI0 724 aaKnown RBP10.64□□□□□ -0.71
RETREG3-207ENST00000589007 TAOK2Q9UL54 1235 aa10.64□□□□□ -0.71
RETREG3-207ENST00000589007 KIF16BQ96L93 1317 aa10.63□□□□□ -0.71
RETREG3-207ENST00000589007 DDTLA6NHG4 134 aaPredicted RBP10.63□□□□□ -0.71
RETREG3-207ENST00000589007 PRDX5P30044 214 aa10.63□□□□□ -0.71
RETREG3-207ENST00000589007 SMAD3P84022 425 aaKnown RBP10.63□□□□□ -0.71
RETREG3-207ENST00000589007 CCL14Q16627 93 aa10.63□□□□□ -0.71
RETREG3-207ENST00000589007 LRRC24Q50LG9 513 aa10.63□□□□□ -0.71
RETREG3-207ENST00000589007 FASTKD5Q7L8L6 764 aaKnown RBP10.63□□□□□ -0.71
RETREG3-207ENST00000589007 COA7Q96BR5 231 aa10.63□□□□□ -0.71
RETREG3-207ENST00000589007 MYH16Q9H6N6 1097 aa10.63□□□□□ -0.71
RETREG3-207ENST00000589007 SPINK5Q9NQ38 1064 aaPredicted RBP10.63□□□□□ -0.71
RETREG3-207ENST00000589007 SUGT1Q9Y2Z0 365 aa10.63□□□□□ -0.71
RETREG3-207ENST00000589007 MYBBP1AQ9BQG0 1328 aaKnown RBP10.62□□□□□ -0.71
RETREG3-207ENST00000589007 F6X3S4 739 aa10.62□□□□□ -0.71
RETREG3-207ENST00000589007 FOSL2P15408 326 aa10.62□□□□□ -0.71
RETREG3-207ENST00000589007 SNX17Q15036 470 aa10.62□□□□□ -0.71
RETREG3-207ENST00000589007 CCER1Q8TC90 406 aaPredicted RBP10.62□□□□□ -0.71
RETREG3-207ENST00000589007 SYMPKQ92797 1274 aaKnown RBP10.62□□□□□ -0.71
RETREG3-207ENST00000589007 SUCLG2Q96I99 432 aa10.62□□□□□ -0.71
RETREG3-207ENST00000589007 IDI2Q9BXS1 227 aa10.62□□□□□ -0.71
RETREG3-207ENST00000589007 CNNM1Q9NRU3 951 aa10.62□□□□□ -0.71
RETREG3-207ENST00000589007 TMOD2Q9NZR1 351 aa10.62□□□□□ -0.71
RETREG3-207ENST00000589007 WDFY4Q6ZS81 3184 aa10.62□□□□□ -0.71
RETREG3-207ENST00000589007 MYO5AQ9Y4I1 1855 aaKnown RBP10.61□□□□□ -0.71
RETREG3-207ENST00000589007 LRRC37A2A6NM11 1700 aa10.61□□□□□ -0.71
RETREG3-207ENST00000589007 GAKO14976 1311 aa10.61□□□□□ -0.71
RETREG3-207ENST00000589007 MAST3O60307 1309 aa10.61□□□□□ -0.71
RETREG3-207ENST00000589007 MUC6Q6W4X9 2439 aa10.61□□□□□ -0.71
RETREG3-207ENST00000589007 TRIM75PA6NK02 468 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms