RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 TCP10L2B9ZVM9 353 aa9.21□□□□□ -0.94
TPM4-210ENST00000588507 F8W031 263 aaPredicted RBP9.21□□□□□ -0.94
TPM4-210ENST00000588507 CXCL11O14625 94 aa9.21□□□□□ -0.94
TPM4-210ENST00000588507 CYP2B6P20813 491 aa9.21□□□□□ -0.94
TPM4-210ENST00000588507 PKN1Q16512 942 aa9.21□□□□□ -0.94
TPM4-210ENST00000588507 FASTKD5Q7L8L6 764 aaKnown RBP9.21□□□□□ -0.94
TPM4-210ENST00000588507 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.21□□□□□ -0.942e-12■■□□□ 12.2
TPM4-210ENST00000588507 BSDC1Q9NW68 430 aaPredicted RBP9.21□□□□□ -0.94
TPM4-210ENST00000588507 SLC45A1Q9Y2W3 748 aa9.21□□□□□ -0.94
TPM4-210ENST00000588507 TRANK1O15050 2925 aa9.21□□□□□ -0.94
TPM4-210ENST00000588507 MAP1BP46821 2468 aaKnown RBP9.21□□□□□ -0.94
TPM4-210ENST00000588507 DNAH12Q6ZR08 3092 aa9.2□□□□□ -0.94
TPM4-210ENST00000588507 XRCC5P13010 732 aaKnown RBP9.2□□□□□ -0.94
TPM4-210ENST00000588507 NEUROD1Q13562 356 aa9.2□□□□□ -0.94
TPM4-210ENST00000588507 SNX17Q15036 470 aa9.2□□□□□ -0.94
TPM4-210ENST00000588507 FAM110CQ1W6H9 321 aa9.2□□□□□ -0.94
TPM4-210ENST00000588507 SAMD1Q6SPF0 538 aaPredicted RBP9.2□□□□□ -0.94
TPM4-210ENST00000588507 CERS5Q8N5B7 392 aa9.2□□□□□ -0.94
TPM4-210ENST00000588507 HOOK2Q96ED9 719 aa9.2□□□□□ -0.94
TPM4-210ENST00000588507 FAM89AQ96GI7 184 aa9.2□□□□□ -0.94
TPM4-210ENST00000588507 SIN3AQ96ST3 1273 aa9.2□□□□□ -0.94
TPM4-210ENST00000588507 MYBBP1AQ9BQG0 1328 aaKnown RBP9.2□□□□□ -0.94
TPM4-210ENST00000588507 GVINP1Q7Z2Y8 2422 aa9.2□□□□□ -0.94
TPM4-210ENST00000588507 CHD9Q3L8U1 2897 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 PRR23AA6NEV1 266 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 KIAA0355O15063 1070 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 ZKSCAN1P17029 563 aaPredicted RBP9.19□□□□□ -0.94
TPM4-210ENST00000588507 RASIP1Q5U651 963 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 CCDC174Q6PII3 467 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 MORC1Q86VD1 984 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 LPAR1Q92633 364 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 ZNF428Q96B54 188 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 TDRD3Q9H7E2 651 aaKnown RBP9.19□□□□□ -0.94
TPM4-210ENST00000588507 DACH1Q9UI36 760 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 GAKO14976 1311 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 A0A0G2JMZ2 1700 aa9.19□□□□□ -0.94
TPM4-210ENST00000588507 FLNBO75369 2602 aaKnown RBP9.18□□□□□ -0.94
TPM4-210ENST00000588507 REV3LO60673 3130 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 MSCO60682 206 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 CLTBP09497 229 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 INPP5BP32019 993 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 TLE2Q04725 743 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 RLFQ13129 1914 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 AK9Q5TCS8 1911 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 C1orf53Q5VUE5 145 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 DCAF15Q66K64 600 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 BMP8AQ7Z5Y6 402 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 TXNRD3Q86VQ6 643 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 THUMPD2Q9BTF0 503 aaKnown RBP9.18□□□□□ -0.94
TPM4-210ENST00000588507 ZNF341Q9BYN7 854 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 BRWD1Q9NSI6 2320 aa9.18□□□□□ -0.94
TPM4-210ENST00000588507 YBX2Q9Y2T7 364 aaKnown RBP9.18□□□□□ -0.94
TPM4-210ENST00000588507 COL4A6Q14031 1691 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 IRS4O14654 1257 aaPredicted RBP9.17□□□□□ -0.94
TPM4-210ENST00000588507 HOXB3P14651 431 aaPredicted RBP9.17□□□□□ -0.94
TPM4-210ENST00000588507 CCT4P50991 539 aaKnown RBP9.17□□□□□ -0.94
TPM4-210ENST00000588507 EPHA10Q5JZY3 1008 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 TMEM240Q5SV17 173 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 GADL1Q6ZQY3 521 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 COPS6Q7L5N1 327 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 ANKRD18AQ8IVF6 992 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 ARRDC4Q8NCT1 418 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 RTF1Q92541 710 aaKnown RBP9.17□□□□□ -0.94
TPM4-210ENST00000588507 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 DDX20Q9UHI6 824 aaKnown RBP9.17□□□□□ -0.94
TPM4-210ENST00000588507 DAGLAQ9Y4D2 1042 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 PLXNA3P51805 1871 aa9.17□□□□□ -0.94
TPM4-210ENST00000588507 KBTBD13C9JR72 458 aa9.16□□□□□ -0.94
TPM4-210ENST00000588507 RFXAPO00287 272 aa9.16□□□□□ -0.94
TPM4-210ENST00000588507 GJC2Q5T442 439 aaPredicted RBP9.16□□□□□ -0.94
TPM4-210ENST00000588507 LRP10Q7Z4F1 713 aa9.16□□□□□ -0.94
TPM4-210ENST00000588507 SUGP1Q8IWZ8 645 aaKnown RBP9.16□□□□□ -0.94
TPM4-210ENST00000588507 RMDN1Q96DB5 314 aa9.16□□□□□ -0.94
TPM4-210ENST00000588507 UPF3BQ9BZI7 483 aaKnown RBP9.16□□□□□ -0.94
TPM4-210ENST00000588507 ARAP2Q8WZ64 1704 aa9.16□□□□□ -0.94
TPM4-210ENST00000588507 MAST4O15021 2626 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 A0A0G2JLL6 359 aaPredicted RBP9.15□□□□□ -0.94
TPM4-210ENST00000588507 SLC5A1P13866 664 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 IL9P15248 144 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 FKBP1AP62942 108 aaKnown RBP9.15□□□□□ -0.94
TPM4-210ENST00000588507 TAF7Q15545 349 aaPredicted RBP9.15□□□□□ -0.94
TPM4-210ENST00000588507 LEXMQ3ZCV2 418 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
TPM4-210ENST00000588507 KRT40Q6A162 431 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 MCM10Q7L590 875 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 PRRT2Q7Z6L0 340 aaPredicted RBP9.15□□□□□ -0.94
TPM4-210ENST00000588507 ADSSL1Q8N142 457 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 SOCS4Q8WXH5 440 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 PBXIP1Q96AQ6 731 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 SH2B1Q9NRF2 756 aaPredicted RBP9.15□□□□□ -0.94
TPM4-210ENST00000588507 TMEM39AQ9NV64 488 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 MIS18AQ9NYP9 233 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 LEMD3Q9Y2U8 911 aa9.15□□□□□ -0.94
TPM4-210ENST00000588507 USP24Q9UPU5 2620 aa9.15□□□□□ -0.95
TPM4-210ENST00000588507 FRMPD3Q5JV73 1810 aa9.15□□□□□ -0.95
TPM4-210ENST00000588507 DIAPH1O60610 1272 aaKnown RBP9.14□□□□□ -0.95
TPM4-210ENST00000588507 GCLCP48506 637 aaPredicted RBP9.14□□□□□ -0.95
TPM4-210ENST00000588507 PPIGQ13427 754 aaKnown RBP eCLIP9.14□□□□□ -0.95
TPM4-210ENST00000588507 PUM1Q14671 1186 aaKnown RBP eCLIP9.14□□□□□ -0.952e-6■■□□□ 13.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms