RNA–Protein interactions for RNA: ENST00000588468.1

CNN1-207, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-207ENST00000588468 ELP3Q9H9T3 547 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 DDX60LQ5H9U9 1706 aaKnown RBP12.16□□□□□ -0.46
CNN1-207ENST00000588468 NAV1Q8NEY1 1877 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 PHIPQ8WWQ0 1821 aa12.16□□□□□ -0.46
CNN1-207ENST00000588468 CYP2E1P05181 493 aaPredicted RBP12.15□□□□□ -0.46
CNN1-207ENST00000588468 GJA5P36382 358 aa12.15□□□□□ -0.46
CNN1-207ENST00000588468 RHBDL3P58872 404 aa12.15□□□□□ -0.46
CNN1-207ENST00000588468 ERO1BQ86YB8 467 aa12.15□□□□□ -0.46
CNN1-207ENST00000588468 IL1RAPL2Q9NP60 686 aa12.15□□□□□ -0.46
CNN1-207ENST00000588468 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
CNN1-207ENST00000588468 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
CNN1-207ENST00000588468 SNCAIPQ9Y6H5 919 aa12.15□□□□□ -0.46
CNN1-207ENST00000588468 TESPA1A2RU30 521 aaPredicted RBP12.14□□□□□ -0.47
CNN1-207ENST00000588468 BAG3O95817 575 aa12.14□□□□□ -0.47
CNN1-207ENST00000588468 IFIT2P09913 472 aaKnown RBP12.14□□□□□ -0.47
CNN1-207ENST00000588468 ZAP70P43403 619 aa12.14□□□□□ -0.47
CNN1-207ENST00000588468 GTF2A2P52657 109 aa12.14□□□□□ -0.47
CNN1-207ENST00000588468 PPIL2Q13356 520 aa12.14□□□□□ -0.47
CNN1-207ENST00000588468 NOL9Q5SY16 702 aaKnown RBP12.14□□□□□ -0.47
CNN1-207ENST00000588468 OTUD7BQ6GQQ9 843 aa12.14□□□□□ -0.47
CNN1-207ENST00000588468 IFNL1Q8IU54 200 aa12.14□□□□□ -0.47
CNN1-207ENST00000588468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.14□□□□□ -0.47
CNN1-207ENST00000588468 PPP4CP60510 307 aa12.13□□□□□ -0.47
CNN1-207ENST00000588468 TTF1Q15361 905 aaPredicted RBP12.13□□□□□ -0.47
CNN1-207ENST00000588468 ZSCAN29Q8IWY8 852 aaPredicted RBP12.13□□□□□ -0.47
CNN1-207ENST00000588468 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
CNN1-207ENST00000588468 OTUD5Q96G74 571 aa12.13□□□□□ -0.47
CNN1-207ENST00000588468 ZCCHC17Q9NP64 241 aaKnown RBP12.13□□□□□ -0.47
CNN1-207ENST00000588468 DDX4Q9NQI0 724 aaKnown RBP12.13□□□□□ -0.47
CNN1-207ENST00000588468 PIH1D3Q9NQM4 214 aaKnown RBP12.13□□□□□ -0.47
CNN1-207ENST00000588468 HTTP42858 3142 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 APBB1O00213 710 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 IGF2BP3O00425 579 aaKnown RBP eCLIP12.12□□□□□ -0.47
CNN1-207ENST00000588468 IDH1O75874 414 aaKnown RBP12.12□□□□□ -0.47
CNN1-207ENST00000588468 INPP5BP32019 993 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 MAP3K10Q02779 954 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 PPATQ06203 517 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 MAP3K12Q12852 859 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 PICALMQ13492 652 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 MIGA2Q7L4E1 593 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 ZFPM1Q8IX07 1006 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 ZKSCAN4Q969J2 545 aaPredicted RBP12.12□□□□□ -0.47
CNN1-207ENST00000588468 MS4A4AQ96JQ5 239 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
CNN1-207ENST00000588468 LRRCC1Q9C099 1032 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 OSBPL5Q9H0X9 879 aaPredicted RBP12.12□□□□□ -0.47
CNN1-207ENST00000588468 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
CNN1-207ENST00000588468 LOC285556D6RIA3 1793 aa12.12□□□□□ -0.47
CNN1-207ENST00000588468 CCL15-CCL14A0A0B4J2E2 113 aa12.11□□□□□ -0.47
CNN1-207ENST00000588468 DDTLA6NHG4 134 aaPredicted RBP12.11□□□□□ -0.47
CNN1-207ENST00000588468 GPR25O00155 361 aa12.11□□□□□ -0.47
CNN1-207ENST00000588468 TBC1D12O60347 775 aa12.11□□□□□ -0.47
CNN1-207ENST00000588468 CETPP11597 493 aa12.11□□□□□ -0.47
CNN1-207ENST00000588468 SNAPC2Q13487 334 aa12.11□□□□□ -0.47
CNN1-207ENST00000588468 CCL15Q16663 113 aa12.11□□□□□ -0.47
CNN1-207ENST00000588468 SH3BP5LQ7L8J4 393 aa12.11□□□□□ -0.47
CNN1-207ENST00000588468 CTU1Q7Z7A3 348 aaKnown RBP12.11□□□□□ -0.47
CNN1-207ENST00000588468 SH3RF3Q8TEJ3 882 aaPredicted RBP12.11□□□□□ -0.47
CNN1-207ENST00000588468 CNKSR2Q8WXI2 1034 aa12.11□□□□□ -0.47
CNN1-207ENST00000588468 BRI3BPQ8WY22 251 aa12.11□□□□□ -0.47
CNN1-207ENST00000588468 AATFQ9NY61 560 aaKnown RBP eCLIP12.11□□□□□ -0.47
CNN1-207ENST00000588468 MYH8P13535 1937 aa12.11□□□□□ -0.47
CNN1-207ENST00000588468 PHF20L1A8MW92 1017 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 FKTNO75072 461 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 TBC1D8O95759 1140 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 CYP7A1P22680 504 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 DGKZQ13574 1117 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 ADGRA1Q86SQ6 560 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 SCYL3Q8IZE3 742 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 ZNF296Q8WUU4 475 aaPredicted RBP12.1□□□□□ -0.47
CNN1-207ENST00000588468 ABHD8Q96I13 439 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 MCOLN1Q9GZU1 580 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 DHX36Q9H2U1 1008 aaKnown RBP12.1□□□□□ -0.47
CNN1-207ENST00000588468 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
CNN1-207ENST00000588468 KCNH4Q9UQ05 1017 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 FLT1P17948 1338 aa12.1□□□□□ -0.47
CNN1-207ENST00000588468 IRF6O14896 467 aa12.09□□□□□ -0.47
CNN1-207ENST00000588468 CTNND1O60716 968 aaKnown RBP12.09□□□□□ -0.47
CNN1-207ENST00000588468 ATP5JP18859 108 aa12.09□□□□□ -0.47
CNN1-207ENST00000588468 CRHR2Q13324 411 aa12.09□□□□□ -0.47
CNN1-207ENST00000588468 AAMPQ13685 434 aa12.09□□□□□ -0.47
CNN1-207ENST00000588468 MAGEB6Q8N7X4 407 aa12.09□□□□□ -0.47
CNN1-207ENST00000588468 PTPN18Q99952 460 aa12.09□□□□□ -0.47
CNN1-207ENST00000588468 DCTPP1Q9H773 170 aa12.09□□□□□ -0.47
CNN1-207ENST00000588468 PKN2Q16513 984 aaKnown RBP12.08□□□□□ -0.48
CNN1-207ENST00000588468 GPATCH3Q96I76 525 aa12.08□□□□□ -0.48
CNN1-207ENST00000588468 DNAJC2Q99543 621 aaKnown RBP12.08□□□□□ -0.48
CNN1-207ENST00000588468 HAUS7Q99871 368 aa12.08□□□□□ -0.48
CNN1-207ENST00000588468 TBC1D2Q9BYX2 928 aa12.08□□□□□ -0.48
CNN1-207ENST00000588468 ANTXR1Q9H6X2 564 aa12.08□□□□□ -0.48
CNN1-207ENST00000588468 NDUFB9Q9Y6M9 179 aa12.08□□□□□ -0.48
CNN1-207ENST00000588468 GOLIM4O00461 696 aa12.07□□□□□ -0.48
CNN1-207ENST00000588468 CXCL11O14625 94 aa12.07□□□□□ -0.48
CNN1-207ENST00000588468 PDE6AP16499 860 aa12.07□□□□□ -0.48
CNN1-207ENST00000588468 TAF1CQ15572 869 aaPredicted RBP12.07□□□□□ -0.48
CNN1-207ENST00000588468 MAPKAPK5Q8IW41 473 aa12.07□□□□□ -0.48
CNN1-207ENST00000588468 TGFBRAP1Q8WUH2 860 aa12.07□□□□□ -0.48
CNN1-207ENST00000588468 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.07□□□□□ -0.48
CNN1-207ENST00000588468 R3HDMLQ9H3Y0 253 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms