RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 TESPA1A2RU30 521 aaPredicted RBP23.9■■□□□ 1.42
TPM4-208ENST00000588410 BAG3O95817 575 aa23.9■■□□□ 1.42
TPM4-208ENST00000588410 CYP2E1P05181 493 aaPredicted RBP23.9■■□□□ 1.42
TPM4-208ENST00000588410 RHBDL3P58872 404 aa23.9■■□□□ 1.42
TPM4-208ENST00000588410 CCL15Q16663 113 aa23.9■■□□□ 1.42
TPM4-208ENST00000588410 CLASRPQ8N2M8 674 aaKnown RBP23.9■■□□□ 1.42
TPM4-208ENST00000588410 MS4A4AQ96JQ5 239 aa23.9■■□□□ 1.42
TPM4-208ENST00000588410 CCDC85CA6NKD9 419 aa23.89■■□□□ 1.41
TPM4-208ENST00000588410 IGSF3O75054 1194 aa23.89■■□□□ 1.41
TPM4-208ENST00000588410 FKTNO75072 461 aa23.89■■□□□ 1.41
TPM4-208ENST00000588410 RAB11FIP3O75154 756 aa23.89■■□□□ 1.41
TPM4-208ENST00000588410 INPP5BP32019 993 aa23.89■■□□□ 1.41
TPM4-208ENST00000588410 SIRT2Q8IXJ6 389 aa23.89■■□□□ 1.41
TPM4-208ENST00000588410 BCL11AQ9H165 835 aa23.89■■□□□ 1.41
TPM4-208ENST00000588410 DDX4Q9NQI0 724 aaKnown RBP23.89■■□□□ 1.41
TPM4-208ENST00000588410 ZNF112Q9UJU3 913 aa23.89■■□□□ 1.41
TPM4-208ENST00000588410 PPATQ06203 517 aa23.88■■□□□ 1.41
TPM4-208ENST00000588410 PPIL2Q13356 520 aa23.88■■□□□ 1.41
TPM4-208ENST00000588410 TEX11Q8IYF3 940 aa23.88■■□□□ 1.41
TPM4-208ENST00000588410 BRI3BPQ8WY22 251 aa23.88■■□□□ 1.41
TPM4-208ENST00000588410 PTPN18Q99952 460 aa23.88■■□□□ 1.41
TPM4-208ENST00000588410 R3HDMLQ9H3Y0 253 aa23.88■■□□□ 1.41
TPM4-208ENST00000588410 PIH1D3Q9NQM4 214 aaKnown RBP23.88■■□□□ 1.41
TPM4-208ENST00000588410 RFX7Q2KHR2 1363 aa23.88■■□□□ 1.41
TPM4-208ENST00000588410 DDTLA6NHG4 134 aaPredicted RBP23.87■■□□□ 1.41
TPM4-208ENST00000588410 NPM3O75607 178 aaKnown RBP23.87■■□□□ 1.41
TPM4-208ENST00000588410 IFIT2P09913 472 aaKnown RBP23.87■■□□□ 1.41
TPM4-208ENST00000588410 CETPP11597 493 aa23.87■■□□□ 1.41
TPM4-208ENST00000588410 PLCG2P16885 1265 aa23.87■■□□□ 1.41
TPM4-208ENST00000588410 SNAPC2Q13487 334 aa23.87■■□□□ 1.41
TPM4-208ENST00000588410 SH3BP5LQ7L8J4 393 aa23.87■■□□□ 1.41
TPM4-208ENST00000588410 IRF6O14896 467 aa23.86■■□□□ 1.41
TPM4-208ENST00000588410 IDH1O75874 414 aaKnown RBP23.86■■□□□ 1.41
TPM4-208ENST00000588410 YTHDC1Q96MU7 727 aaKnown RBP23.86■■□□□ 1.41
TPM4-208ENST00000588410 AATFQ9NY61 560 aaKnown RBP eCLIP23.86■■□□□ 1.41
TPM4-208ENST00000588410 AKAP11Q9UKA4 1901 aa23.85■■□□□ 1.41
TPM4-208ENST00000588410 CRHR2Q13324 411 aa23.85■■□□□ 1.41
TPM4-208ENST00000588410 NOL9Q5SY16 702 aaKnown RBP23.85■■□□□ 1.41
TPM4-208ENST00000588410 SH3RF3Q8TEJ3 882 aaPredicted RBP23.85■■□□□ 1.41
TPM4-208ENST00000588410 PICK1Q9NRD5 415 aa23.85■■□□□ 1.41
TPM4-208ENST00000588410 CYP7A1P22680 504 aa23.84■■□□□ 1.41
TPM4-208ENST00000588410 ATRNL1Q5VV63 1379 aa23.83■■□□□ 1.41
TPM4-208ENST00000588410 PPP4CP60510 307 aa23.83■■□□□ 1.41
TPM4-208ENST00000588410 MAP3K12Q12852 859 aa23.83■■□□□ 1.41
TPM4-208ENST00000588410 TAF1CQ15572 869 aaPredicted RBP23.83■■□□□ 1.41
TPM4-208ENST00000588410 PKN2Q16513 984 aaKnown RBP23.83■■□□□ 1.41
TPM4-208ENST00000588410 OSBPL5Q9H0X9 879 aaPredicted RBP23.83■■□□□ 1.41
TPM4-208ENST00000588410 ZFYVE28Q9HCC9 887 aa23.83■■□□□ 1.41
TPM4-208ENST00000588410 NDUFB9Q9Y6M9 179 aa23.83■■□□□ 1.41
TPM4-208ENST00000588410 CASP8AP2Q9UKL3 1982 aa23.82■■□□□ 1.4
TPM4-208ENST00000588410 PHF20L1A8MW92 1017 aa23.82■■□□□ 1.4
TPM4-208ENST00000588410 SCYL3Q8IZE3 742 aa23.82■■□□□ 1.4
TPM4-208ENST00000588410 FAM43AQ8N2R8 423 aa23.82■■□□□ 1.4
TPM4-208ENST00000588410 MAP3K10Q02779 954 aa23.81■■□□□ 1.4
TPM4-208ENST00000588410 TTF1Q15361 905 aaPredicted RBP23.81■■□□□ 1.4
TPM4-208ENST00000588410 ADGRA1Q86SQ6 560 aa23.81■■□□□ 1.4
TPM4-208ENST00000588410 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.81■■□□□ 1.4
TPM4-208ENST00000588410 OTOFQ9HC10 1997 aa23.8■■□□□ 1.4
TPM4-208ENST00000588410 TBC1D12O60347 775 aa23.8■■□□□ 1.4
TPM4-208ENST00000588410 CTNND1O60716 968 aaKnown RBP23.8■■□□□ 1.4
TPM4-208ENST00000588410 MAGEB6Q8N7X4 407 aa23.8■■□□□ 1.4
TPM4-208ENST00000588410 TGFBRAP1Q8WUH2 860 aa23.8■■□□□ 1.4
TPM4-208ENST00000588410 ERO1AQ96HE7 468 aa23.8■■□□□ 1.4
TPM4-208ENST00000588410 ANTXR1Q9H6X2 564 aa23.8■■□□□ 1.4
TPM4-208ENST00000588410 MYH2Q9UKX2 1941 aa23.8■■□□□ 1.4
TPM4-208ENST00000588410 BTBD19C9JJ37 291 aa23.79■■□□□ 1.4
TPM4-208ENST00000588410 TMED8Q6PL24 325 aaPredicted RBP23.79■■□□□ 1.4
TPM4-208ENST00000588410 CERS3Q8IU89 383 aa23.79■■□□□ 1.4
TPM4-208ENST00000588410 MAPKAPK5Q8IW41 473 aa23.79■■□□□ 1.4
TPM4-208ENST00000588410 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.79■■□□□ 1.4
TPM4-208ENST00000588410 DNAJC2Q99543 621 aaKnown RBP23.79■■□□□ 1.4
TPM4-208ENST00000588410 LRRCC1Q9C099 1032 aa23.79■■□□□ 1.4
TPM4-208ENST00000588410 DHX36Q9H2U1 1008 aaKnown RBP23.79■■□□□ 1.4
TPM4-208ENST00000588410 ZCCHC17Q9NP64 241 aaKnown RBP23.79■■□□□ 1.4
TPM4-208ENST00000588410 KCNH4Q9UQ05 1017 aa23.79■■□□□ 1.4
TPM4-208ENST00000588410 ZHX2Q9Y6X8 837 aa23.79■■□□□ 1.4
TPM4-208ENST00000588410 SLURP2P0DP57 97 aa23.78■■□□□ 1.4
TPM4-208ENST00000588410 SP3Q02447 781 aa23.78■■□□□ 1.4
TPM4-208ENST00000588410 COL2A1P02458 1487 aaPredicted RBP23.77■■□□□ 1.4
TPM4-208ENST00000588410 CXCL11O14625 94 aa23.77■■□□□ 1.4
TPM4-208ENST00000588410 PTPRAP18433 802 aa23.77■■□□□ 1.4
TPM4-208ENST00000588410 RRP1P56182 461 aaKnown RBP23.77■■□□□ 1.4
TPM4-208ENST00000588410 DYNLL1P63167 89 aaKnown RBP23.77■■□□□ 1.4
TPM4-208ENST00000588410 MIGA1Q8NAN2 632 aa23.77■■□□□ 1.4
TPM4-208ENST00000588410 PI4KBQ9UBF8 816 aa23.77■■□□□ 1.4
TPM4-208ENST00000588410 TRIM17Q9Y577 477 aa23.77■■□□□ 1.4
TPM4-208ENST00000588410 FAM196BA6NMK8 535 aa23.76■■□□□ 1.39
TPM4-208ENST00000588410 GOLIM4O00461 696 aa23.76■■□□□ 1.39
TPM4-208ENST00000588410 FBXO46Q6PJ61 603 aaPredicted RBP23.76■■□□□ 1.39
TPM4-208ENST00000588410 ANKRD23Q86SG2 305 aa23.76■■□□□ 1.39
TPM4-208ENST00000588410 TRIM34Q9BYJ4 488 aa23.76■■□□□ 1.39
TPM4-208ENST00000588410 HERC5Q9UII4 1024 aaKnown RBP23.76■■□□□ 1.39
TPM4-208ENST00000588410 FLT1P17948 1338 aa23.76■■□□□ 1.39
TPM4-208ENST00000588410 USP5P45974 858 aa23.75■■□□□ 1.39
TPM4-208ENST00000588410 CD99L2Q8TCZ2 262 aa23.75■■□□□ 1.39
TPM4-208ENST00000588410 HPS5Q9UPZ3 1129 aa23.75■■□□□ 1.39
TPM4-208ENST00000588410 PDHXO00330 501 aa23.74■■□□□ 1.39
TPM4-208ENST00000588410 ARHGEF6Q15052 776 aa23.74■■□□□ 1.39
TPM4-208ENST00000588410 CRACR2BQ8N4Y2 399 aaPredicted RBP23.74■■□□□ 1.39
TPM4-208ENST00000588410 TLR2O60603 784 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms