RNA–Protein interactions for RNA: ENST00000588011.1

SNRPCP20-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 20, humanhuman

BASIC

Gene SNRPCP20, Length 210 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP20-201ENST00000588011 COL6A1P12109 1028 aa10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 PTPRAP18433 802 aa10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 FKBP5Q13451 457 aaPredicted RBP10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 TWISTNBQ3B726 338 aaPredicted RBP10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 CAVIN4Q5BKX8 364 aa10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 EPHA10Q5JZY3 1008 aa10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 VPS37DQ86XT2 251 aa10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 GJD2Q9UKL4 321 aa10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 KIF16BQ96L93 1317 aa10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 FRMPD3Q5JV73 1810 aa10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 SPTBN5Q9NRC6 3674 aaKnown RBP10.28□□□□□ -0.76
SNRPCP20-201ENST00000588011 LOC285556D6RIA3 1793 aa10.27□□□□□ -0.77
SNRPCP20-201ENST00000588011 BEND3Q5T5X7 828 aa10.27□□□□□ -0.77
SNRPCP20-201ENST00000588011 MAP3K21Q5TCX8 1036 aa10.27□□□□□ -0.77
SNRPCP20-201ENST00000588011 SCYL3Q8IZE3 742 aa10.27□□□□□ -0.77
SNRPCP20-201ENST00000588011 SMCR8Q8TEV9 937 aaPredicted RBP10.27□□□□□ -0.77
SNRPCP20-201ENST00000588011 SYMPKQ92797 1274 aaKnown RBP10.27□□□□□ -0.77
SNRPCP20-201ENST00000588011 AGTPBP1Q9UPW5 1226 aa10.27□□□□□ -0.77
SNRPCP20-201ENST00000588011 ZHX2Q9Y6X8 837 aa10.27□□□□□ -0.77
SNRPCP20-201ENST00000588011 PFASO15067 1338 aa10.27□□□□□ -0.77
SNRPCP20-201ENST00000588011 ATRNL1Q5VV63 1379 aa10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 GRM8O00222 908 aa10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 FRAT2O75474 233 aaPredicted RBP10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 GCLCP48506 637 aaPredicted RBP10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 CHAF1AQ13111 956 aaPredicted RBP10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 CDC42EP5Q6NZY7 148 aa10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 ANKRD13CQ8N6S4 541 aa10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 PUS3Q9BZE2 481 aaKnown RBP10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 SPINK5Q9NQ38 1064 aaPredicted RBP10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 FAM198AQ9UFP1 575 aa10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 IQSEC3Q9UPP2 1182 aaPredicted RBP10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 MAST2Q6P0Q8 1798 aa10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 ATAD5Q96QE3 1844 aa10.26□□□□□ -0.77
SNRPCP20-201ENST00000588011 CTNND1O60716 968 aaKnown RBP10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 PDE8BO95263 885 aa10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 XRCC5P13010 732 aaKnown RBP10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 GADL1Q6ZQY3 521 aa10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 VGLL2Q8N8G2 317 aa10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 PROCA1Q8NCQ7 364 aaPredicted RBP10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 WDR66Q8TBY9 1149 aa10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 PICK1Q9NRD5 415 aa10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 PNMA3Q9UL41 463 aa10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 DAGLAQ9Y4D2 1042 aa10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 LTBP2Q14767 1821 aa10.25□□□□□ -0.77
SNRPCP20-201ENST00000588011 ENTPD3O75355 529 aa10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 TCP10Q12799 353 aa10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 NFIAQ12857 509 aa10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 CCDC27Q2M243 656 aa10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 ZNF697Q5TEC3 545 aa10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 TRMT44Q8IYL2 757 aaKnown RBP10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 TSR2Q969E8 191 aaKnown RBP10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 CDX2Q99626 313 aaPredicted RBP10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 IDI2Q9BXS1 227 aa10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 TAOK2Q9UL54 1235 aa10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 RLFQ13129 1914 aa10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 MUC3AQ02505 3323 aa10.24□□□□□ -0.77
SNRPCP20-201ENST00000588011 ZBTB22O15209 634 aa10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 ALDH1L1O75891 902 aa10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 FGFR2P21802 821 aa10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 TRIM32Q13049 653 aa10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 LRRC26Q2I0M4 334 aa10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 RABL6Q3YEC7 729 aaPredicted RBP10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 NCBP3Q53F19 620 aaKnown RBP10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 MAFAQ8NHW3 353 aaPredicted RBP10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 TRIB2Q92519 343 aa10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 KAZALD1Q96I82 304 aa10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 TBC1D2Q9BYX2 928 aa10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 SEMA6BQ9H3T3 888 aa10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 IL16Q14005 1332 aa10.23□□□□□ -0.77
SNRPCP20-201ENST00000588011 VAMP4O75379 141 aa10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 COL9A1P20849 921 aa10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 PABPC4Q13310 644 aaKnown RBP eCLIP10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 LHX8Q68G74 356 aa10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 ZFPM1Q8IX07 1006 aa10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 USP40Q9NVE5 1235 aa10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 C9orf78Q9NZ63 289 aaPredicted RBP10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 MORF4L1Q9UBU8 362 aa10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 LRRFIP2Q9Y608 721 aaKnown RBP10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 UTYO14607 1347 aa10.22□□□□□ -0.77
SNRPCP20-201ENST00000588011 F6X3S4 739 aa10.21□□□□□ -0.77
SNRPCP20-201ENST00000588011 TBC1D12O60347 775 aa10.21□□□□□ -0.77
SNRPCP20-201ENST00000588011 IFIT1P09914 478 aaKnown RBP10.21□□□□□ -0.77
SNRPCP20-201ENST00000588011 PRKAR2AP13861 404 aaKnown RBP10.21□□□□□ -0.77
SNRPCP20-201ENST00000588011 LRRC24Q50LG9 513 aa10.21□□□□□ -0.77
SNRPCP20-201ENST00000588011 METTL24Q5JXM2 366 aa10.21□□□□□ -0.77
SNRPCP20-201ENST00000588011 TREML2Q5T2D2 321 aa10.21□□□□□ -0.77
SNRPCP20-201ENST00000588011 FAM161BQ96MY7 647 aa10.21□□□□□ -0.77
SNRPCP20-201ENST00000588011 LBHD1Q9BQE6 289 aaPredicted RBP10.21□□□□□ -0.77
SNRPCP20-201ENST00000588011 SALL1Q9NSC2 1324 aa10.21□□□□□ -0.78
SNRPCP20-201ENST00000588011 RFX7Q2KHR2 1363 aa10.21□□□□□ -0.78
SNRPCP20-201ENST00000588011 TMEM265A0A087WTH1 108 aa10.2□□□□□ -0.78
SNRPCP20-201ENST00000588011 TRIM75PA6NK02 468 aa10.2□□□□□ -0.78
SNRPCP20-201ENST00000588011 RGS3P49796 1198 aa10.2□□□□□ -0.78
SNRPCP20-201ENST00000588011 SMAD3P84022 425 aaKnown RBP10.2□□□□□ -0.78
SNRPCP20-201ENST00000588011 CACNB2Q08289 660 aaPredicted RBP10.2□□□□□ -0.78
SNRPCP20-201ENST00000588011 PUM3Q15397 648 aaKnown RBP10.2□□□□□ -0.78
SNRPCP20-201ENST00000588011 DIXDC1Q155Q3 683 aa10.2□□□□□ -0.78
SNRPCP20-201ENST00000588011 SH3D19Q5HYK7 790 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms