RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TRAF5O00463 557 aa12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 FOXP2O15409 715 aa12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 USP5P45974 858 aa12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 TNFAIP1Q13829 316 aa12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 VPS53Q5VIR6 699 aa12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 FAM83AQ86UY5 434 aa12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 CERS3Q8IU89 383 aa12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 SMC1BQ8NDV3 1235 aa12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 RBM46Q8TBY0 533 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 TEPSINQ96N21 525 aa12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-213ENST00000587988 DDTLA6NHG4 134 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 GSG1L2A8MUP6 293 aa12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 ENTPD3O75355 529 aa12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 CDC45O75419 566 aa12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 NPM3O75607 178 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 TNNI2P48788 182 aa12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 SLC4A8Q2Y0W8 1093 aa12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 NBPF12Q5TAG4 269 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 FAM151AQ8WW52 585 aa12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 OSBPL5Q9H0X9 879 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 SAP30BPQ9UHR5 308 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 CCDC171Q6TFL3 1326 aa12.85□□□□□ -0.35
SMARCA4-213ENST00000587988 BAZ2AQ9UIF9 1905 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 PATL2C9JE40 543 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 SGSM2O43147 1006 aa12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 SLURP2P0DP57 97 aa12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 EVX2Q03828 476 aa12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 CDCA5Q96FF9 252 aa12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 EPB41L4AQ9HCS5 686 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 PALD1Q9ULE6 856 aa12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 NAV1Q8NEY1 1877 aa12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 PASKQ96RG2 1323 aa12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 MYH1P12882 1939 aa12.84□□□□□ -0.35
SMARCA4-213ENST00000587988 SMIM22K7EJ46 135 aa12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 HSPD1P10809 573 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 GNAT2P19087 354 aa12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 ZSCAN29Q8IWY8 852 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 IFNL3Q8IZI9 196 aa12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 RUFY2Q8WXA3 655 aa12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 ESYT1Q9BSJ8 1104 aa12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 ATP8A2Q9NTI2 1148 aa12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 FZD1Q9UP38 647 aa12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 PPP2R3BQ9Y5P8 575 aa12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 RAD50Q92878 1312 aa12.83□□□□□ -0.36
SMARCA4-213ENST00000587988 DDX60LQ5H9U9 1706 aaKnown RBP12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 SSC5DA1L4H1 1573 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 CYP2D7A0A087X1C5 515 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 APPP05067 770 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 CYP2D6P10635 497 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 PLCD1P51178 756 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 PTH1RQ03431 593 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 FSTL1Q12841 308 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 CTR9Q6PD62 1173 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 ZNF408Q9H9D4 720 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 MCM9Q9NXL9 1143 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 SIPA1L1O43166 1804 aa12.82□□□□□ -0.36
SMARCA4-213ENST00000587988 ATRNL1Q5VV63 1379 aa12.81□□□□□ -0.36
SMARCA4-213ENST00000587988 RPAP1Q9BWH6 1393 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-213ENST00000587988 COL2A1P02458 1487 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-213ENST00000587988 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
SMARCA4-213ENST00000587988 USP17L21D6R901 530 aa12.81□□□□□ -0.36
SMARCA4-213ENST00000587988 MFAP1P55081 439 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-213ENST00000587988 CST9Q5W186 159 aa12.81□□□□□ -0.36
SMARCA4-213ENST00000587988 GIMAP6Q6P9H5 292 aa12.81□□□□□ -0.36
SMARCA4-213ENST00000587988 MIGA2Q7L4E1 593 aa12.81□□□□□ -0.36
SMARCA4-213ENST00000587988 CSRNP1Q96S65 589 aa12.81□□□□□ -0.36
SMARCA4-213ENST00000587988 TRPM7Q96QT4 1865 aa12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 FAM196BA6NMK8 535 aa12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 CELF2O95319 508 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 FGAP02671 866 aa12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 POLR3DP05423 398 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 TDO2P48775 406 aa12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 PRKG1Q13976 671 aa12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 SUPT20HL1Q3ZLR7 823 aa12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 CASC1Q6TDU7 716 aa12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 MOB2Q70IA6 237 aa12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 DHX36Q9H2U1 1008 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 PI4KBQ9UBF8 816 aa12.8□□□□□ -0.36
SMARCA4-213ENST00000587988 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 ALX1Q15699 326 aa12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 SBK1Q52WX2 424 aa12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 C12orf60Q5U649 245 aa12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 DYNLL2Q96FJ2 89 aa12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 DDRGK1Q96HY6 314 aa12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 DSCC1Q9BVC3 393 aa12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 NACAP1Q9BZK3 213 aa12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 LSG1Q9H089 658 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 NAPBQ9H115 298 aa12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 DNAJC18Q9H819 358 aa12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 ARPP21Q9UBL0 812 aaPredicted RBP12.79□□□□□ -0.36
SMARCA4-213ENST00000587988 USP2O75604 605 aaPredicted RBP12.78□□□□□ -0.36
SMARCA4-213ENST00000587988 HLA-DOAP06340 250 aa12.78□□□□□ -0.36
SMARCA4-213ENST00000587988 MAP3K10Q02779 954 aa12.78□□□□□ -0.36
SMARCA4-213ENST00000587988 TTC6Q86TZ1 520 aa12.78□□□□□ -0.36
SMARCA4-213ENST00000587988 METTL16Q86W50 562 aaKnown RBP12.78□□□□□ -0.36
SMARCA4-213ENST00000587988 STK11IPQ8N1F8 1099 aa12.78□□□□□ -0.36
SMARCA4-213ENST00000587988 LAMB1P07942 1786 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms