RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 PICK1Q9NRD5 415 aa17.45■□□□□ 0.38
DNMT1-213ENST00000587604 ZHX2Q9Y6X8 837 aa17.45■□□□□ 0.38
DNMT1-213ENST00000587604 PDS5AQ29RF7 1337 aaKnown RBP17.45■□□□□ 0.38
DNMT1-213ENST00000587604 MGAMO43451 1857 aa17.44■□□□□ 0.38
DNMT1-213ENST00000587604 PTPRAP18433 802 aa17.44■□□□□ 0.38
DNMT1-213ENST00000587604 RASGRF1Q13972 1273 aa17.44■□□□□ 0.38
DNMT1-213ENST00000587604 MTFR1Q15390 333 aa17.44■□□□□ 0.38
DNMT1-213ENST00000587604 SPTY2D1Q68D10 685 aaPredicted RBP17.44■□□□□ 0.38
DNMT1-213ENST00000587604 SH3BP5LQ7L8J4 393 aa17.44■□□□□ 0.38
DNMT1-213ENST00000587604 DZIP1Q86YF9 867 aaKnown RBP17.44■□□□□ 0.38
DNMT1-213ENST00000587604 NKX2-3Q8TAU0 364 aa17.44■□□□□ 0.38
DNMT1-213ENST00000587604 ABCF2Q9UG63 623 aa17.44■□□□□ 0.38
DNMT1-213ENST00000587604 MYPNQ86TC9 1320 aa17.44■□□□□ 0.38
DNMT1-213ENST00000587604 A0A0G2JLL6 359 aaPredicted RBP17.43■□□□□ 0.38
DNMT1-213ENST00000587604 CYP2C8P10632 490 aa17.43■□□□□ 0.38
DNMT1-213ENST00000587604 FCGRTP55899 365 aa17.43■□□□□ 0.38
DNMT1-213ENST00000587604 PRRT2Q7Z6L0 340 aaPredicted RBP17.43■□□□□ 0.38
DNMT1-213ENST00000587604 ZSCAN29Q8IWY8 852 aaPredicted RBP17.43■□□□□ 0.38
DNMT1-213ENST00000587604 MEIS3Q99687 375 aa17.43■□□□□ 0.38
DNMT1-213ENST00000587604 COLQQ9Y215 455 aaPredicted RBP17.43■□□□□ 0.38
DNMT1-213ENST00000587604 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
DNMT1-213ENST00000587604 AFG3L2Q9Y4W6 797 aa17.43■□□□□ 0.38
DNMT1-213ENST00000587604 RFX7Q2KHR2 1363 aa17.42■□□□□ 0.38
DNMT1-213ENST00000587604 DDTLA6NHG4 134 aaPredicted RBP17.42■□□□□ 0.38
DNMT1-213ENST00000587604 H0YGN5 161 aa17.42■□□□□ 0.38
DNMT1-213ENST00000587604 CTNND1O60716 968 aaKnown RBP17.42■□□□□ 0.38
DNMT1-213ENST00000587604 GJB1P08034 283 aa17.42■□□□□ 0.38
DNMT1-213ENST00000587604 FXR1P51114 621 aaKnown RBP eCLIP17.42■□□□□ 0.38
DNMT1-213ENST00000587604 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
DNMT1-213ENST00000587604 SHISA4Q96DD7 197 aa17.42■□□□□ 0.38
DNMT1-213ENST00000587604 SLC45A1Q9Y2W3 748 aa17.42■□□□□ 0.38
DNMT1-213ENST00000587604 PTPRFP10586 1907 aa17.42■□□□□ 0.38
DNMT1-213ENST00000587604 A0A1B0GUL7 405 aa17.41■□□□□ 0.38
DNMT1-213ENST00000587604 GJA8P48165 433 aa17.41■□□□□ 0.38
DNMT1-213ENST00000587604 PRKCZQ05513 592 aa17.41■□□□□ 0.38
DNMT1-213ENST00000587604 XAGE2Q96GT9 111 aa17.41■□□□□ 0.38
DNMT1-213ENST00000587604 DDX4Q9NQI0 724 aaKnown RBP17.41■□□□□ 0.38
DNMT1-213ENST00000587604 DOCK3Q8IZD9 2030 aa17.41■□□□□ 0.38
DNMT1-213ENST00000587604 PHIPQ8WWQ0 1821 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 GPR75-ASB3A0A0A6YYF3 556 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 GNAI3P08754 354 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 CCL5P13501 91 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 BTDP43251 543 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 RARSP54136 660 aaKnown RBP17.4■□□□□ 0.38
DNMT1-213ENST00000587604 UBXN2AP68543 259 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 TFCP2Q12800 502 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 MTX1Q13505 466 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 MVPQ14764 893 aaKnown RBP17.4■□□□□ 0.38
DNMT1-213ENST00000587604 ERICH6Q7L0X2 663 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 RNF208Q9H0X6 261 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 BIN2Q9UBW5 565 aaPredicted RBP17.4■□□□□ 0.38
DNMT1-213ENST00000587604 MROH7-TTC4A0A0A0MT08 1334 aa17.4■□□□□ 0.38
DNMT1-213ENST00000587604 DOCK1Q14185 1865 aa17.39■□□□□ 0.38
DNMT1-213ENST00000587604 TBC1D12O60347 775 aa17.39■□□□□ 0.37
DNMT1-213ENST00000587604 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
DNMT1-213ENST00000587604 RHBDL3P58872 404 aa17.39■□□□□ 0.37
DNMT1-213ENST00000587604 MECOMQ03112 1051 aa17.39■□□□□ 0.37
DNMT1-213ENST00000587604 PICALMQ13492 652 aa17.39■□□□□ 0.37
DNMT1-213ENST00000587604 GADL1Q6ZQY3 521 aa17.39■□□□□ 0.37
DNMT1-213ENST00000587604 SLAIN1Q8ND83 568 aa17.39■□□□□ 0.37
DNMT1-213ENST00000587604 DPF3Q92784 378 aa17.39■□□□□ 0.37
DNMT1-213ENST00000587604 GABRQQ9UN88 632 aa17.39■□□□□ 0.37
DNMT1-213ENST00000587604 MAP4K4O95819 1239 aaPredicted RBP17.38■□□□□ 0.37
DNMT1-213ENST00000587604 SLURP2P0DP57 97 aa17.38■□□□□ 0.37
DNMT1-213ENST00000587604 UBE2Q1Q7Z7E8 422 aa17.38■□□□□ 0.37
DNMT1-213ENST00000587604 NEUROD6Q96NK8 337 aa17.38■□□□□ 0.37
DNMT1-213ENST00000587604 RANBP2P49792 3224 aaKnown RBP17.37■□□□□ 0.37
DNMT1-213ENST00000587604 TRIM75PA6NK02 468 aa17.37■□□□□ 0.37
DNMT1-213ENST00000587604 LDHCP07864 332 aa17.37■□□□□ 0.37
DNMT1-213ENST00000587604 SMCR8Q8TEV9 937 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-213ENST00000587604 ZNF384Q8TF68 577 aa17.37■□□□□ 0.37
DNMT1-213ENST00000587604 HMG20BQ9P0W2 317 aa17.37■□□□□ 0.37
DNMT1-213ENST00000587604 SZT2Q5T011 3432 aa17.36■□□□□ 0.37
DNMT1-213ENST00000587604 ADCY3O60266 1144 aa17.36■□□□□ 0.37
DNMT1-213ENST00000587604 FLT3LGP49771 235 aa17.36■□□□□ 0.37
DNMT1-213ENST00000587604 GSTO1P78417 241 aa17.36■□□□□ 0.37
DNMT1-213ENST00000587604 IRF5Q13568 498 aa17.36■□□□□ 0.37
DNMT1-213ENST00000587604 SPATA5Q8NB90 893 aa17.36■□□□□ 0.37
DNMT1-213ENST00000587604 PXYLP1Q8TE99 480 aa17.36■□□□□ 0.37
DNMT1-213ENST00000587604 U2AF1L4Q8WU68 220 aaKnown RBP17.36■□□□□ 0.37
DNMT1-213ENST00000587604 NSUN4Q96CB9 384 aaKnown RBP17.36■□□□□ 0.37
DNMT1-213ENST00000587604 HTATIP2Q9BUP3 242 aa17.36■□□□□ 0.37
DNMT1-213ENST00000587604 AGTPBP1Q9UPW5 1226 aa17.36■□□□□ 0.37
DNMT1-213ENST00000587604 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.36■□□□□ 0.37
DNMT1-213ENST00000587604 TNPO2O14787 897 aaKnown RBP17.35■□□□□ 0.37
DNMT1-213ENST00000587604 SGPL1O95470 568 aa17.35■□□□□ 0.37
DNMT1-213ENST00000587604 GORABQ5T7V8 394 aa17.35■□□□□ 0.37
DNMT1-213ENST00000587604 OSBPL5Q9H0X9 879 aaPredicted RBP17.35■□□□□ 0.37
DNMT1-213ENST00000587604 UNC93B1Q9H1C4 597 aa17.35■□□□□ 0.37
DNMT1-213ENST00000587604 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.35■□□□□ 0.37
DNMT1-213ENST00000587604 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.35■□□□□ 0.37
DNMT1-213ENST00000587604 IPO8O15397 1037 aaKnown RBP17.34■□□□□ 0.37
DNMT1-213ENST00000587604 CAPN2P17655 700 aa17.34■□□□□ 0.37
DNMT1-213ENST00000587604 CHRDL2Q6WN34 429 aa17.34■□□□□ 0.37
DNMT1-213ENST00000587604 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
DNMT1-213ENST00000587604 CCDC84Q86UT8 332 aaPredicted RBP17.34■□□□□ 0.37
DNMT1-213ENST00000587604 PROCA1Q8NCQ7 364 aaPredicted RBP17.34■□□□□ 0.37
DNMT1-213ENST00000587604 PNMA3Q9UL41 463 aa17.34■□□□□ 0.37
DNMT1-213ENST00000587604 GNAI2P04899 355 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms