RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 CAPN2P17655 700 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 BMP8BP34820 402 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 DIXDC1Q155Q3 683 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 CDC42EP5Q6NZY7 148 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 FASTKD5Q7L8L6 764 aaKnown RBP10.75□□□□□ -0.69
SDF2-204ENST00000587338 PRRT2Q7Z6L0 340 aaPredicted RBP10.75□□□□□ -0.69
SDF2-204ENST00000587338 SCYL3Q8IZE3 742 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 SRCIN1Q9C0H9 1055 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.75□□□□□ -0.69
SDF2-204ENST00000587338 MRS2Q9HD23 443 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 PICK1Q9NRD5 415 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 ZHX2Q9Y6X8 837 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 IL16Q14005 1332 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 DNAH12Q6ZR08 3092 aa10.75□□□□□ -0.69
SDF2-204ENST00000587338 EYSQ5T1H1 3165 aa10.74□□□□□ -0.69
SDF2-204ENST00000587338 IFIT1P09914 478 aaKnown RBP10.74□□□□□ -0.69
SDF2-204ENST00000587338 PTPRAP18433 802 aa10.74□□□□□ -0.69
SDF2-204ENST00000587338 MAGEA10P43363 369 aaPredicted RBP10.74□□□□□ -0.69
SDF2-204ENST00000587338 EXOSC9Q06265 439 aaKnown RBP10.74□□□□□ -0.69
SDF2-204ENST00000587338 LRIT3Q3SXY7 679 aa10.74□□□□□ -0.69
SDF2-204ENST00000587338 ANKRD13CQ8N6S4 541 aa10.74□□□□□ -0.69
SDF2-204ENST00000587338 VGLL2Q8N8G2 317 aa10.74□□□□□ -0.69
SDF2-204ENST00000587338 COA7Q96BR5 231 aa10.74□□□□□ -0.69
SDF2-204ENST00000587338 KAZALD1Q96I82 304 aa10.74□□□□□ -0.69
SDF2-204ENST00000587338 BICC1Q9H694 974 aaKnown RBP10.74□□□□□ -0.69
SDF2-204ENST00000587338 MTMR10Q9NXD2 777 aa10.74□□□□□ -0.69
SDF2-204ENST00000587338 FAM198AQ9UFP1 575 aa10.74□□□□□ -0.69
SDF2-204ENST00000587338 PRUNE2Q8WUY3 3088 aa10.74□□□□□ -0.69
SDF2-204ENST00000587338 TRIM75PA6NK02 468 aa10.73□□□□□ -0.69
SDF2-204ENST00000587338 NBPF7P0C2Y1 421 aaPredicted RBP10.73□□□□□ -0.69
SDF2-204ENST00000587338 PUM3Q15397 648 aaKnown RBP10.73□□□□□ -0.69
SDF2-204ENST00000587338 ZFPM1Q8IX07 1006 aa10.73□□□□□ -0.69
SDF2-204ENST00000587338 TDHQ8IZJ6 230 aa10.73□□□□□ -0.69
SDF2-204ENST00000587338 ANKLE1Q8NAG6 615 aa10.73□□□□□ -0.69
SDF2-204ENST00000587338 KLHDC4Q8TBB5 520 aa10.73□□□□□ -0.69
SDF2-204ENST00000587338 WDR66Q8TBY9 1149 aa10.73□□□□□ -0.69
SDF2-204ENST00000587338 COL25A1Q9BXS0 654 aaPredicted RBP10.73□□□□□ -0.69
SDF2-204ENST00000587338 UBE2OQ9C0C9 1292 aaKnown RBP10.73□□□□□ -0.69
SDF2-204ENST00000587338 NBPF3Q9H094 633 aa10.73□□□□□ -0.69
SDF2-204ENST00000587338 USP40Q9NVE5 1235 aa10.73□□□□□ -0.69
SDF2-204ENST00000587338 SLC45A1Q9Y2W3 748 aa10.73□□□□□ -0.69
SDF2-204ENST00000587338 PHF20L1A8MW92 1017 aa10.72□□□□□ -0.69
SDF2-204ENST00000587338 HMGCRP04035 888 aa10.72□□□□□ -0.69
SDF2-204ENST00000587338 PRDX5P30044 214 aa10.72□□□□□ -0.69
SDF2-204ENST00000587338 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.72□□□□□ -0.69
SDF2-204ENST00000587338 ZSCAN29Q8IWY8 852 aaPredicted RBP10.72□□□□□ -0.69
SDF2-204ENST00000587338 ANKRD44Q8N8A2 993 aa10.72□□□□□ -0.69
SDF2-204ENST00000587338 C11orf49Q9H6J7 331 aa10.72□□□□□ -0.69
SDF2-204ENST00000587338 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.72□□□□□ -0.69
SDF2-204ENST00000587338 AFG3L2Q9Y4W6 797 aa10.72□□□□□ -0.69
SDF2-204ENST00000587338 LRRFIP2Q9Y608 721 aaKnown RBP10.72□□□□□ -0.69
SDF2-204ENST00000587338 KIF16BQ96L93 1317 aa10.72□□□□□ -0.69
SDF2-204ENST00000587338 ATRNL1Q5VV63 1379 aa10.72□□□□□ -0.69
SDF2-204ENST00000587338 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
SDF2-204ENST00000587338 LDHBP07195 334 aaKnown RBP10.71□□□□□ -0.69
SDF2-204ENST00000587338 SLC5A1P13866 664 aa10.71□□□□□ -0.69
SDF2-204ENST00000587338 RGS3P49796 1198 aa10.71□□□□□ -0.69
SDF2-204ENST00000587338 FAM110CQ1W6H9 321 aa10.71□□□□□ -0.69
SDF2-204ENST00000587338 RABL6Q3YEC7 729 aaPredicted RBP10.71□□□□□ -0.69
SDF2-204ENST00000587338 CCDC184Q52MB2 194 aa10.71□□□□□ -0.69
SDF2-204ENST00000587338 CCDC84Q86UT8 332 aaPredicted RBP10.71□□□□□ -0.69
SDF2-204ENST00000587338 DOCK3Q8IZD9 2030 aa10.71□□□□□ -0.69
SDF2-204ENST00000587338 DOCK2Q92608 1830 aa10.71□□□□□ -0.69
SDF2-204ENST00000587338 HMX1Q9NP08 348 aaPredicted RBP10.71□□□□□ -0.69
SDF2-204ENST00000587338 PNMA3Q9UL41 463 aa10.71□□□□□ -0.69
SDF2-204ENST00000587338 AGTPBP1Q9UPW5 1226 aa10.71□□□□□ -0.69
SDF2-204ENST00000587338 SALL2Q9Y467 1007 aaPredicted RBP10.71□□□□□ -0.69
SDF2-204ENST00000587338 MYH13Q9UKX3 1938 aa10.7□□□□□ -0.7
SDF2-204ENST00000587338 DDX60LQ5H9U9 1706 aaKnown RBP10.7□□□□□ -0.7
SDF2-204ENST00000587338 SLURP2P0DP57 97 aa10.7□□□□□ -0.7
SDF2-204ENST00000587338 FGFR2P21802 821 aa10.7□□□□□ -0.7
SDF2-204ENST00000587338 TRIM32Q13049 653 aa10.7□□□□□ -0.7
SDF2-204ENST00000587338 TREML2Q5T2D2 321 aa10.7□□□□□ -0.7
SDF2-204ENST00000587338 FAM9BQ8IZU0 186 aa10.7□□□□□ -0.7
SDF2-204ENST00000587338 PTPRFP10586 1907 aa10.7□□□□□ -0.7
SDF2-204ENST00000587338 UTYO14607 1347 aa10.69□□□□□ -0.7
SDF2-204ENST00000587338 RPTORQ8N122 1335 aa10.69□□□□□ -0.7
SDF2-204ENST00000587338 CTNND1O60716 968 aaKnown RBP10.69□□□□□ -0.7
SDF2-204ENST00000587338 ENTPD3O75355 529 aa10.69□□□□□ -0.7
SDF2-204ENST00000587338 SH3BP5LQ7L8J4 393 aa10.69□□□□□ -0.7
SDF2-204ENST00000587338 LPIN2Q92539 896 aa10.69□□□□□ -0.7
SDF2-204ENST00000587338 DOCK1Q14185 1865 aa10.69□□□□□ -0.7
SDF2-204ENST00000587338 SPTBN5Q9NRC6 3674 aaKnown RBP10.69□□□□□ -0.7
SDF2-204ENST00000587338 PFASO15067 1338 aa10.68□□□□□ -0.7
SDF2-204ENST00000587338 DDTLA6NHG4 134 aaPredicted RBP10.68□□□□□ -0.7
SDF2-204ENST00000587338 PICALMQ13492 652 aa10.68□□□□□ -0.7
SDF2-204ENST00000587338 WDR63Q8IWG1 891 aa10.68□□□□□ -0.7
SDF2-204ENST00000587338 TRIB2Q92519 343 aa10.68□□□□□ -0.7
SDF2-204ENST00000587338 FAM161BQ96MY7 647 aa10.68□□□□□ -0.7
SDF2-204ENST00000587338 IDI2Q9BXS1 227 aa10.68□□□□□ -0.7
SDF2-204ENST00000587338 OGDHLQ9ULD0 1010 aa10.68□□□□□ -0.7
SDF2-204ENST00000587338 RFX7Q2KHR2 1363 aa10.67□□□□□ -0.7
SDF2-204ENST00000587338 FAM196BA6NMK8 535 aa10.67□□□□□ -0.7
SDF2-204ENST00000587338 EYA2O00167 538 aa10.67□□□□□ -0.7
SDF2-204ENST00000587338 PRKAR2AP13861 404 aaKnown RBP10.67□□□□□ -0.7
SDF2-204ENST00000587338 GCLCP48506 637 aaPredicted RBP10.67□□□□□ -0.7
SDF2-204ENST00000587338 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
SDF2-204ENST00000587338 DZIP1Q86YF9 867 aaKnown RBP10.67□□□□□ -0.7
SDF2-204ENST00000587338 PROCA1Q8NCQ7 364 aaPredicted RBP10.67□□□□□ -0.7
SDF2-204ENST00000587338 GUCD1Q96NT3 240 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms