RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 CCT6AP40227 531 aaKnown RBP11□□□□□ -0.65
GPATCH8-205ENST00000587228 TYRO3Q06418 890 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 UNC5CLQ8IV45 518 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 ZCCHC11Q5TAX3 1644 aaKnown RBP11□□□□□ -0.65
GPATCH8-205ENST00000587228 E7EWF7 191 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 PDE8BO95263 885 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 SPECC1Q5M775 1068 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 CCDC186Q7Z3E2 898 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 KCNJ14Q9UNX9 436 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 TMCO3Q6UWJ1 677 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 HOOK3Q86VS8 718 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 CTAGE1Q96RT6 745 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 PRDM15P57071 1507 aaPredicted RBP11□□□□□ -0.65
GPATCH8-205ENST00000587228 KDM5AP29375 1690 aaKnown RBP11□□□□□ -0.65
GPATCH8-205ENST00000587228 ZNF804BA4D1E1 1349 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 ADORA1P30542 326 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 PPARAQ07869 468 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 SMCR8Q8TEV9 937 aaPredicted RBP11□□□□□ -0.65
GPATCH8-205ENST00000587228 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
GPATCH8-205ENST00000587228 SRP68Q9UHB9 627 aaKnown RBP11□□□□□ -0.65
GPATCH8-205ENST00000587228 NOD1Q9Y239 953 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 MYOM2P54296 1465 aa11□□□□□ -0.65
GPATCH8-205ENST00000587228 CCDC172P0C7W6 258 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 PPM1FP49593 454 aaPredicted RBP10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 MAEAQ7L5Y9 396 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 CMTR1Q8N1G2 835 aaKnown RBP10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 KIFC2Q96AC6 838 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 HOOK2Q96ED9 719 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 MAPK8IP1Q9UQF2 711 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 ATF5Q9Y2D1 282 aaPredicted RBP10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 JAK2O60674 1132 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 IRX3P78415 501 aaPredicted RBP10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 SNW1Q13573 536 aaKnown RBP10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 CCDC97Q96F63 343 aaPredicted RBP10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 UVSSAQ2YD98 709 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 SV2BQ7L1I2 683 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 HECW2Q9P2P5 1572 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 ARID4AP29374 1257 aaPredicted RBP10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 ZRSR2Q15696 482 aaKnown RBP10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 ANO1Q5XXA6 986 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 IFNL3Q8IZI9 196 aa10.99□□□□□ -0.65
GPATCH8-205ENST00000587228 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.99□□□□□ -0.658e-7■■■■□ 21.2
GPATCH8-205ENST00000587228 CCDC169A6NNP5 214 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 NOP56O00567 594 aaKnown RBP10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 ZBED4O75132 1171 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 IFFO1Q0D2I5 559 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 ERFEQ4G0M1 354 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 GBP3Q9H0R5 595 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 VPS54Q9P1Q0 977 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 BLMP54132 1417 aaPredicted RBP10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 TRAF5O00463 557 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 SKILP12757 684 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 TNFAIP1Q13829 316 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 KRT40Q6A162 431 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 CSADQ9Y600 493 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 SPATA31A3Q5VYP0 1347 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 CYLC1P35663 651 aaPredicted RBP10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 GJC1P36383 396 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 PTH1RQ03431 593 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 DCAF17Q5H9S7 520 aaPredicted RBP10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 PAGR1Q9BTK6 254 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 COPRSQ9NQ92 184 aa10.98□□□□□ -0.65
GPATCH8-205ENST00000587228 BTDP43251 543 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 ADCY7P51828 1080 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 RAD51AP2Q09MP3 1159 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 NONOQ15233 471 aaKnown RBP eCLIP10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 TTC38Q5R3I4 469 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 CEP135Q66GS9 1140 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 NCAPH2Q6IBW4 605 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 DSCC1Q9BVC3 393 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 GPHNQ9NQX3 736 aaPredicted RBP10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 CWC15Q9P013 229 aaKnown RBP10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 ARPP21Q9UBL0 812 aaPredicted RBP10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 GCC2Q8IWJ2 1684 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 ATP7BP35670 1465 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 CCDC65Q8IXS2 484 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 ZNF654Q8IZM8 581 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 DYDC1Q8WWB3 177 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 DBNDD1Q9H9R9 158 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 DBNLQ9UJU6 430 aaKnown RBP10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 AXIN2Q9Y2T1 843 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 CLRN2A0PK11 232 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 CYP27B1O15528 508 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 ACTN2P35609 894 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 UBXN1Q04323 297 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 PDCL2Q8N4E4 241 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 BICDL2A1A5D9 508 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 HSPD1P10809 573 aaKnown RBP10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 GSPT1P15170 499 aaKnown RBP10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 HSPA4P34932 840 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 UBE4AQ14139 1066 aa10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 NAP1L4Q99733 375 aaKnown RBP10.97□□□□□ -0.65
GPATCH8-205ENST00000587228 FGAP02671 866 aa10.96□□□□□ -0.65
GPATCH8-205ENST00000587228 EZRP15311 586 aaKnown RBP10.96□□□□□ -0.65
GPATCH8-205ENST00000587228 PLCD1P51178 756 aa10.96□□□□□ -0.65
GPATCH8-205ENST00000587228 LRRC47Q8N1G4 583 aaKnown RBP10.96□□□□□ -0.65
GPATCH8-205ENST00000587228 LLPHQ9BRT6 129 aaKnown RBP10.96□□□□□ -0.65
GPATCH8-205ENST00000587228 BEGAINQ9BUH8 593 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms