RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 RHBDL3P58872 404 aa21.66■■□□□ 1.06
TPM4-206ENST00000587201 NOM1Q5C9Z4 860 aaKnown RBP21.66■■□□□ 1.06
TPM4-206ENST00000587201 CTU1Q7Z7A3 348 aaKnown RBP21.66■■□□□ 1.06
TPM4-206ENST00000587201 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
TPM4-206ENST00000587201 MS4A4AQ96JQ5 239 aa21.66■■□□□ 1.06
TPM4-206ENST00000587201 PTPN18Q99952 460 aa21.66■■□□□ 1.06
TPM4-206ENST00000587201 IL1RAPL2Q9NP60 686 aa21.66■■□□□ 1.06
TPM4-206ENST00000587201 DDX4Q9NQI0 724 aaKnown RBP21.66■■□□□ 1.06
TPM4-206ENST00000587201 CCL15-CCL14A0A0B4J2E2 113 aa21.65■■□□□ 1.06
TPM4-206ENST00000587201 CCDC85CA6NKD9 419 aa21.65■■□□□ 1.06
TPM4-206ENST00000587201 APBB1O00213 710 aa21.65■■□□□ 1.06
TPM4-206ENST00000587201 CCL15Q16663 113 aa21.65■■□□□ 1.06
TPM4-206ENST00000587201 NAA16Q6N069 864 aaPredicted RBP21.65■■□□□ 1.06
TPM4-206ENST00000587201 SIRT2Q8IXJ6 389 aa21.65■■□□□ 1.06
TPM4-206ENST00000587201 NOL10Q9BSC4 688 aaKnown RBP21.65■■□□□ 1.06
TPM4-206ENST00000587201 ZNF112Q9UJU3 913 aa21.65■■□□□ 1.06
TPM4-206ENST00000587201 LAMB1P07942 1786 aa21.65■■□□□ 1.06
TPM4-206ENST00000587201 DDTLA6NHG4 134 aaPredicted RBP21.64■■□□□ 1.05
TPM4-206ENST00000587201 FKTNO75072 461 aa21.64■■□□□ 1.05
TPM4-206ENST00000587201 MAP4K4O95819 1239 aaPredicted RBP21.64■■□□□ 1.05
TPM4-206ENST00000587201 SH3BP5LQ7L8J4 393 aa21.64■■□□□ 1.05
TPM4-206ENST00000587201 BRI3BPQ8WY22 251 aa21.64■■□□□ 1.05
TPM4-206ENST00000587201 PPATQ06203 517 aa21.63■■□□□ 1.05
TPM4-206ENST00000587201 PPIL2Q13356 520 aa21.63■■□□□ 1.05
TPM4-206ENST00000587201 KIF1BPQ96EK5 621 aa21.63■■□□□ 1.05
TPM4-206ENST00000587201 IRF6O14896 467 aa21.62■■□□□ 1.05
TPM4-206ENST00000587201 BAG3O95817 575 aa21.62■■□□□ 1.05
TPM4-206ENST00000587201 CRHR2Q13324 411 aa21.62■■□□□ 1.05
TPM4-206ENST00000587201 TEX11Q8IYF3 940 aa21.62■■□□□ 1.05
TPM4-206ENST00000587201 CLASRPQ8N2M8 674 aaKnown RBP21.62■■□□□ 1.05
TPM4-206ENST00000587201 BCL11AQ9H165 835 aa21.62■■□□□ 1.05
TPM4-206ENST00000587201 PIH1D3Q9NQM4 214 aaKnown RBP21.62■■□□□ 1.05
TPM4-206ENST00000587201 AATFQ9NY61 560 aaKnown RBP eCLIP21.62■■□□□ 1.05
TPM4-206ENST00000587201 ATRNL1Q5VV63 1379 aa21.61■■□□□ 1.05
TPM4-206ENST00000587201 IGSF3O75054 1194 aa21.61■■□□□ 1.05
TPM4-206ENST00000587201 RAB11FIP3O75154 756 aa21.61■■□□□ 1.05
TPM4-206ENST00000587201 NPM3O75607 178 aaKnown RBP21.61■■□□□ 1.05
TPM4-206ENST00000587201 CETPP11597 493 aa21.61■■□□□ 1.05
TPM4-206ENST00000587201 SNAPC2Q13487 334 aa21.61■■□□□ 1.05
TPM4-206ENST00000587201 NOL9Q5SY16 702 aaKnown RBP21.61■■□□□ 1.05
TPM4-206ENST00000587201 DOCK2Q92608 1830 aa21.6■■□□□ 1.05
TPM4-206ENST00000587201 SH3RF3Q8TEJ3 882 aaPredicted RBP21.6■■□□□ 1.05
TPM4-206ENST00000587201 NDUFB9Q9Y6M9 179 aa21.6■■□□□ 1.05
TPM4-206ENST00000587201 MAST2Q6P0Q8 1798 aa21.59■■□□□ 1.05
TPM4-206ENST00000587201 IDH1O75874 414 aaKnown RBP21.59■■□□□ 1.05
TPM4-206ENST00000587201 IFIT2P09913 472 aaKnown RBP21.59■■□□□ 1.05
TPM4-206ENST00000587201 TAF1CQ15572 869 aaPredicted RBP21.59■■□□□ 1.05
TPM4-206ENST00000587201 FAM43AQ8N2R8 423 aa21.59■■□□□ 1.05
TPM4-206ENST00000587201 OSBPL5Q9H0X9 879 aaPredicted RBP21.59■■□□□ 1.05
TPM4-206ENST00000587201 ZFYVE28Q9HCC9 887 aa21.59■■□□□ 1.05
TPM4-206ENST00000587201 PHF20L1A8MW92 1017 aa21.58■■□□□ 1.05
TPM4-206ENST00000587201 SLURP2P0DP57 97 aa21.58■■□□□ 1.05
TPM4-206ENST00000587201 PLCG2P16885 1265 aa21.58■■□□□ 1.05
TPM4-206ENST00000587201 CYP7A1P22680 504 aa21.58■■□□□ 1.05
TPM4-206ENST00000587201 MAP3K10Q02779 954 aa21.58■■□□□ 1.05
TPM4-206ENST00000587201 PKN2Q16513 984 aaKnown RBP21.58■■□□□ 1.05
TPM4-206ENST00000587201 ADGRA1Q86SQ6 560 aa21.58■■□□□ 1.05
TPM4-206ENST00000587201 PPP4CP60510 307 aa21.57■■□□□ 1.04
TPM4-206ENST00000587201 SCYL3Q8IZE3 742 aa21.57■■□□□ 1.04
TPM4-206ENST00000587201 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
TPM4-206ENST00000587201 ANTXR1Q9H6X2 564 aa21.57■■□□□ 1.04
TPM4-206ENST00000587201 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.57■■□□□ 1.04
TPM4-206ENST00000587201 PICK1Q9NRD5 415 aa21.57■■□□□ 1.04
TPM4-206ENST00000587201 BTBD19C9JJ37 291 aa21.56■■□□□ 1.04
TPM4-206ENST00000587201 TBC1D12O60347 775 aa21.56■■□□□ 1.04
TPM4-206ENST00000587201 MAP3K12Q12852 859 aa21.56■■□□□ 1.04
TPM4-206ENST00000587201 TGFBRAP1Q8WUH2 860 aa21.56■■□□□ 1.04
TPM4-206ENST00000587201 KCNH4Q9UQ05 1017 aa21.56■■□□□ 1.04
TPM4-206ENST00000587201 CTNND1O60716 968 aaKnown RBP21.55■■□□□ 1.04
TPM4-206ENST00000587201 DYNLL1P63167 89 aaKnown RBP21.55■■□□□ 1.04
TPM4-206ENST00000587201 SP3Q02447 781 aa21.55■■□□□ 1.04
TPM4-206ENST00000587201 MAPKAPK5Q8IW41 473 aa21.55■■□□□ 1.04
TPM4-206ENST00000587201 MAGEB6Q8N7X4 407 aa21.55■■□□□ 1.04
TPM4-206ENST00000587201 ERO1AQ96HE7 468 aa21.55■■□□□ 1.04
TPM4-206ENST00000587201 ZCCHC17Q9NP64 241 aaKnown RBP21.55■■□□□ 1.04
TPM4-206ENST00000587201 COL2A1P02458 1487 aaPredicted RBP21.55■■□□□ 1.04
TPM4-206ENST00000587201 MYO5AQ9Y4I1 1855 aaKnown RBP21.55■■□□□ 1.04
TPM4-206ENST00000587201 FAM196BA6NMK8 535 aa21.54■■□□□ 1.04
TPM4-206ENST00000587201 PTPRAP18433 802 aa21.54■■□□□ 1.04
TPM4-206ENST00000587201 TTF1Q15361 905 aaPredicted RBP21.54■■□□□ 1.04
TPM4-206ENST00000587201 CD99L2Q8TCZ2 262 aa21.54■■□□□ 1.04
TPM4-206ENST00000587201 HPS5Q9UPZ3 1129 aa21.54■■□□□ 1.04
TPM4-206ENST00000587201 TRIM17Q9Y577 477 aa21.54■■□□□ 1.04
TPM4-206ENST00000587201 ZHX2Q9Y6X8 837 aa21.54■■□□□ 1.04
TPM4-206ENST00000587201 FBXO46Q6PJ61 603 aaPredicted RBP21.53■■□□□ 1.04
TPM4-206ENST00000587201 MIGA1Q8NAN2 632 aa21.53■■□□□ 1.04
TPM4-206ENST00000587201 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.53■■□□□ 1.04
TPM4-206ENST00000587201 DNAJC2Q99543 621 aaKnown RBP21.53■■□□□ 1.04
TPM4-206ENST00000587201 DHX36Q9H2U1 1008 aaKnown RBP21.53■■□□□ 1.04
TPM4-206ENST00000587201 FLT1P17948 1338 aa21.53■■□□□ 1.04
TPM4-206ENST00000587201 CXCL11O14625 94 aa21.52■■□□□ 1.04
TPM4-206ENST00000587201 ANKRD23Q86SG2 305 aa21.52■■□□□ 1.04
TPM4-206ENST00000587201 LRRCC1Q9C099 1032 aa21.52■■□□□ 1.04
TPM4-206ENST00000587201 PI4KBQ9UBF8 816 aa21.52■■□□□ 1.04
TPM4-206ENST00000587201 TLR2O60603 784 aa21.51■■□□□ 1.03
TPM4-206ENST00000587201 TMED8Q6PL24 325 aaPredicted RBP21.51■■□□□ 1.03
TPM4-206ENST00000587201 OTOP1Q7RTM1 612 aa21.51■■□□□ 1.03
TPM4-206ENST00000587201 CERS3Q8IU89 383 aa21.51■■□□□ 1.03
TPM4-206ENST00000587201 HERC5Q9UII4 1024 aaKnown RBP21.51■■□□□ 1.03
TPM4-206ENST00000587201 PDHXO00330 501 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms