RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 SRGAP3O43295 1099 aa18.87■□□□□ 0.61
MBD1-215ENST00000586884 FMNL1O95466 1100 aaPredicted RBP18.87■□□□□ 0.61
MBD1-215ENST00000586884 OSBPP22059 807 aa18.87■□□□□ 0.61
MBD1-215ENST00000586884 CTGFP29279 349 aa18.87■□□□□ 0.61
MBD1-215ENST00000586884 MAP3K10Q02779 954 aa18.87■□□□□ 0.61
MBD1-215ENST00000586884 GPAT2Q6NUI2 795 aa18.87■□□□□ 0.61
MBD1-215ENST00000586884 FASTKD5Q7L8L6 764 aaKnown RBP18.87■□□□□ 0.61
MBD1-215ENST00000586884 ZSCAN29Q8IWY8 852 aaPredicted RBP18.87■□□□□ 0.61
MBD1-215ENST00000586884 ZHX2Q9Y6X8 837 aa18.87■□□□□ 0.61
MBD1-215ENST00000586884 MROH7-TTC4A0A0A0MT08 1334 aa18.86■□□□□ 0.61
MBD1-215ENST00000586884 A0A0G2JLL6 359 aaPredicted RBP18.86■□□□□ 0.61
MBD1-215ENST00000586884 PTPRAP18433 802 aa18.86■□□□□ 0.61
MBD1-215ENST00000586884 BTDP43251 543 aa18.86■□□□□ 0.61
MBD1-215ENST00000586884 SH3BP5LQ7L8J4 393 aa18.86■□□□□ 0.61
MBD1-215ENST00000586884 PRRT2Q7Z6L0 340 aaPredicted RBP18.86■□□□□ 0.61
MBD1-215ENST00000586884 RAET1EQ8TD07 263 aa18.86■□□□□ 0.61
MBD1-215ENST00000586884 XAGE2Q96GT9 111 aa18.86■□□□□ 0.61
MBD1-215ENST00000586884 DOCK2Q92608 1830 aa18.86■□□□□ 0.61
MBD1-215ENST00000586884 MYPNQ86TC9 1320 aa18.85■□□□□ 0.61
MBD1-215ENST00000586884 CTNND1O60716 968 aaKnown RBP18.85■□□□□ 0.61
MBD1-215ENST00000586884 ECM2O94769 699 aaPredicted RBP18.85■□□□□ 0.61
MBD1-215ENST00000586884 BCRP11274 1271 aa18.85■□□□□ 0.61
MBD1-215ENST00000586884 GRK4P32298 578 aa18.85■□□□□ 0.61
MBD1-215ENST00000586884 FCGRTP55899 365 aa18.85■□□□□ 0.61
MBD1-215ENST00000586884 TFCP2Q12800 502 aa18.85■□□□□ 0.61
MBD1-215ENST00000586884 SLC45A1Q9Y2W3 748 aa18.85■□□□□ 0.61
MBD1-215ENST00000586884 AFG3L2Q9Y4W6 797 aa18.85■□□□□ 0.61
MBD1-215ENST00000586884 GPR75-ASB3A0A0A6YYF3 556 aa18.84■□□□□ 0.61
MBD1-215ENST00000586884 DDTLA6NHG4 134 aaPredicted RBP18.84■□□□□ 0.61
MBD1-215ENST00000586884 CYP2C8P10632 490 aa18.84■□□□□ 0.61
MBD1-215ENST00000586884 MECOMQ03112 1051 aa18.84■□□□□ 0.61
MBD1-215ENST00000586884 PICALMQ13492 652 aa18.84■□□□□ 0.61
MBD1-215ENST00000586884 ERICH6Q7L0X2 663 aa18.84■□□□□ 0.61
MBD1-215ENST00000586884 NKX2-3Q8TAU0 364 aa18.84■□□□□ 0.61
MBD1-215ENST00000586884 DDX4Q9NQI0 724 aaKnown RBP18.84■□□□□ 0.61
MBD1-215ENST00000586884 AK9Q5TCS8 1911 aa18.84■□□□□ 0.61
MBD1-215ENST00000586884 IPO8O15397 1037 aaKnown RBP18.83■□□□□ 0.6
MBD1-215ENST00000586884 NPM3O75607 178 aaKnown RBP18.83■□□□□ 0.6
MBD1-215ENST00000586884 MAP4K4O95819 1239 aaPredicted RBP18.83■□□□□ 0.6
MBD1-215ENST00000586884 MTFR1Q15390 333 aa18.83■□□□□ 0.6
MBD1-215ENST00000586884 MYH2Q9UKX2 1941 aa18.82■□□□□ 0.6
MBD1-215ENST00000586884 CCER2I3L3R5 266 aa18.82■□□□□ 0.6
MBD1-215ENST00000586884 TBC1D12O60347 775 aa18.82■□□□□ 0.6
MBD1-215ENST00000586884 RHBDL3P58872 404 aa18.82■□□□□ 0.6
MBD1-215ENST00000586884 GSTO1P78417 241 aa18.82■□□□□ 0.6
MBD1-215ENST00000586884 GADL1Q6ZQY3 521 aa18.82■□□□□ 0.6
MBD1-215ENST00000586884 NEUROD6Q96NK8 337 aa18.82■□□□□ 0.6
MBD1-215ENST00000586884 HMG20BQ9P0W2 317 aa18.82■□□□□ 0.6
MBD1-215ENST00000586884 GNAI2P04899 355 aa18.81■□□□□ 0.6
MBD1-215ENST00000586884 LDHCP07864 332 aa18.81■□□□□ 0.6
MBD1-215ENST00000586884 UBXN2AP68543 259 aa18.81■□□□□ 0.6
MBD1-215ENST00000586884 PRKCZQ05513 592 aa18.81■□□□□ 0.6
MBD1-215ENST00000586884 GORABQ5T7V8 394 aa18.81■□□□□ 0.6
MBD1-215ENST00000586884 SPATA5Q8NB90 893 aa18.81■□□□□ 0.6
MBD1-215ENST00000586884 SLAIN1Q8ND83 568 aa18.81■□□□□ 0.6
MBD1-215ENST00000586884 SHISA4Q96DD7 197 aa18.81■□□□□ 0.6
MBD1-215ENST00000586884 COL2A1P02458 1487 aaPredicted RBP18.8■□□□□ 0.6
MBD1-215ENST00000586884 GJB1P08034 283 aa18.8■□□□□ 0.6
MBD1-215ENST00000586884 CCL5P13501 91 aa18.8■□□□□ 0.6
MBD1-215ENST00000586884 TRIM27P14373 513 aa18.8■□□□□ 0.6
MBD1-215ENST00000586884 GJA8P48165 433 aa18.8■□□□□ 0.6
MBD1-215ENST00000586884 SMCR8Q8TEV9 937 aaPredicted RBP18.8■□□□□ 0.6
MBD1-215ENST00000586884 ZNF384Q8TF68 577 aa18.8■□□□□ 0.6
MBD1-215ENST00000586884 NSUN4Q96CB9 384 aaKnown RBP18.8■□□□□ 0.6
MBD1-215ENST00000586884 BIN2Q9UBW5 565 aaPredicted RBP18.8■□□□□ 0.6
MBD1-215ENST00000586884 TRIM75PA6NK02 468 aa18.79■□□□□ 0.6
MBD1-215ENST00000586884 ARID4AP29374 1257 aaPredicted RBP18.79■□□□□ 0.6
MBD1-215ENST00000586884 AGTPBP1Q9UPW5 1226 aa18.79■□□□□ 0.6
MBD1-215ENST00000586884 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.79■□□□□ 0.6
MBD1-215ENST00000586884 DOCK1Q14185 1865 aa18.79■□□□□ 0.6
MBD1-215ENST00000586884 H0YGN5 161 aa18.78■□□□□ 0.6
MBD1-215ENST00000586884 SLURP2P0DP57 97 aa18.78■□□□□ 0.6
MBD1-215ENST00000586884 G3BP1Q13283 466 aaKnown RBP eCLIP18.78■□□□□ 0.6
MBD1-215ENST00000586884 PI16Q6UXB8 463 aa18.78■□□□□ 0.6
MBD1-215ENST00000586884 ATF7IPQ6VMQ6 1270 aa18.78■□□□□ 0.6
MBD1-215ENST00000586884 RNF208Q9H0X6 261 aa18.78■□□□□ 0.6
MBD1-215ENST00000586884 OSBPL5Q9H0X9 879 aaPredicted RBP18.78■□□□□ 0.6
MBD1-215ENST00000586884 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.78■□□□□ 0.6
MBD1-215ENST00000586884 RAI14Q9P0K7 980 aa18.78■□□□□ 0.6
MBD1-215ENST00000586884 PNMA3Q9UL41 463 aa18.78■□□□□ 0.6
MBD1-215ENST00000586884 COLQQ9Y215 455 aaPredicted RBP18.78■□□□□ 0.6
MBD1-215ENST00000586884 TNPO2O14787 897 aaKnown RBP18.77■□□□□ 0.6
MBD1-215ENST00000586884 UQCRFS1P1P0C7P4 283 aa18.77■□□□□ 0.6
MBD1-215ENST00000586884 FXR1P51114 621 aaKnown RBP eCLIP18.77■□□□□ 0.6
MBD1-215ENST00000586884 TBC1D9Q6ZT07 1266 aa18.77■□□□□ 0.6
MBD1-215ENST00000586884 TBC1D2Q9BYX2 928 aa18.77■□□□□ 0.6
MBD1-215ENST00000586884 GABRQQ9UN88 632 aa18.77■□□□□ 0.6
MBD1-215ENST00000586884 PNMA6EA0A0J9YXQ4 647 aa18.76■□□□□ 0.59
MBD1-215ENST00000586884 ADCY3O60266 1144 aa18.76■□□□□ 0.59
MBD1-215ENST00000586884 FLT3LGP49771 235 aa18.76■□□□□ 0.59
MBD1-215ENST00000586884 IRF5Q13568 498 aa18.76■□□□□ 0.59
MBD1-215ENST00000586884 UBE2Q1Q7Z7E8 422 aa18.76■□□□□ 0.59
MBD1-215ENST00000586884 PROCA1Q8NCQ7 364 aaPredicted RBP18.76■□□□□ 0.59
MBD1-215ENST00000586884 PXYLP1Q8TE99 480 aa18.76■□□□□ 0.59
MBD1-215ENST00000586884 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
MBD1-215ENST00000586884 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.76■□□□□ 0.59
MBD1-215ENST00000586884 FAM196BA6NMK8 535 aa18.75■□□□□ 0.59
MBD1-215ENST00000586884 CAPN2P17655 700 aa18.75■□□□□ 0.59
MBD1-215ENST00000586884 MCAMP43121 646 aa18.75■□□□□ 0.59
MBD1-215ENST00000586884 CCDC84Q86UT8 332 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms