RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 MS4A1P11836 297 aa20.85■□□□□ 0.93
TRIM47-203ENST00000586495 MCAMP43121 646 aa20.85■□□□□ 0.93
TRIM47-203ENST00000586495 PI16Q6UXB8 463 aa20.85■□□□□ 0.93
TRIM47-203ENST00000586495 NSUN4Q96CB9 384 aaKnown RBP20.85■□□□□ 0.93
TRIM47-203ENST00000586495 EFCC1Q9HA90 598 aa20.85■□□□□ 0.93
TRIM47-203ENST00000586495 LRP2BPQ9P2M1 347 aa20.85■□□□□ 0.93
TRIM47-203ENST00000586495 NOP58Q9Y2X3 529 aaKnown RBP20.85■□□□□ 0.93
TRIM47-203ENST00000586495 BTBD19C9JJ37 291 aa20.84■□□□□ 0.93
TRIM47-203ENST00000586495 PICALMQ13492 652 aa20.84■□□□□ 0.93
TRIM47-203ENST00000586495 TBC1D9Q6ZT07 1266 aa20.84■□□□□ 0.93
TRIM47-203ENST00000586495 RFX7Q2KHR2 1363 aa20.84■□□□□ 0.93
TRIM47-203ENST00000586495 TLR2O60603 784 aa20.83■□□□□ 0.93
TRIM47-203ENST00000586495 NPM3O75607 178 aaKnown RBP20.83■□□□□ 0.93
TRIM47-203ENST00000586495 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.83■□□□□ 0.93
TRIM47-203ENST00000586495 DBNDD2Q9BQY9 259 aa20.83■□□□□ 0.93
TRIM47-203ENST00000586495 DDX4Q9NQI0 724 aaKnown RBP20.83■□□□□ 0.93
TRIM47-203ENST00000586495 KCNH4Q9UQ05 1017 aa20.83■□□□□ 0.93
TRIM47-203ENST00000586495 PTPN22Q9Y2R2 807 aa20.83■□□□□ 0.93
TRIM47-203ENST00000586495 RHBDL3P58872 404 aa20.82■□□□□ 0.92
TRIM47-203ENST00000586495 MAP3K10Q02779 954 aa20.82■□□□□ 0.92
TRIM47-203ENST00000586495 SH3BP5LQ7L8J4 393 aa20.82■□□□□ 0.92
TRIM47-203ENST00000586495 ZNF384Q8TF68 577 aa20.82■□□□□ 0.92
TRIM47-203ENST00000586495 NOL10Q9BSC4 688 aaKnown RBP20.82■□□□□ 0.92
TRIM47-203ENST00000586495 ATRNL1Q5VV63 1379 aa20.82■□□□□ 0.92
TRIM47-203ENST00000586495 DDTLA6NHG4 134 aaPredicted RBP20.81■□□□□ 0.92
TRIM47-203ENST00000586495 CXCL11O14625 94 aa20.81■□□□□ 0.92
TRIM47-203ENST00000586495 IGSF3O75054 1194 aa20.81■□□□□ 0.92
TRIM47-203ENST00000586495 ANKRD23Q86SG2 305 aa20.81■□□□□ 0.92
TRIM47-203ENST00000586495 SCYL3Q8IZE3 742 aa20.81■□□□□ 0.92
TRIM47-203ENST00000586495 ZNF512BQ96KM6 892 aaPredicted RBP20.81■□□□□ 0.92
TRIM47-203ENST00000586495 PICK1Q9NRD5 415 aa20.81■□□□□ 0.92
TRIM47-203ENST00000586495 PHF20L1A8MW92 1017 aa20.8■□□□□ 0.92
TRIM47-203ENST00000586495 KIF22Q14807 665 aa20.8■□□□□ 0.92
TRIM47-203ENST00000586495 CEP85Q6P2H3 762 aa20.8■□□□□ 0.92
TRIM47-203ENST00000586495 PANK1Q8TE04 598 aa20.8■□□□□ 0.92
TRIM47-203ENST00000586495 SNRKQ9NRH2 765 aa20.8■□□□□ 0.92
TRIM47-203ENST00000586495 DOCK2Q92608 1830 aa20.79■□□□□ 0.92
TRIM47-203ENST00000586495 CTNND1O60716 968 aaKnown RBP20.79■□□□□ 0.92
TRIM47-203ENST00000586495 BAG3O95817 575 aa20.79■□□□□ 0.92
TRIM47-203ENST00000586495 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
TRIM47-203ENST00000586495 ERC1Q8IUD2 1116 aa20.79■□□□□ 0.92
TRIM47-203ENST00000586495 PDHXO00330 501 aa20.78■□□□□ 0.92
TRIM47-203ENST00000586495 TBC1D12O60347 775 aa20.78■□□□□ 0.92
TRIM47-203ENST00000586495 PTPRAP18433 802 aa20.78■□□□□ 0.92
TRIM47-203ENST00000586495 CCDC8Q9H0W5 538 aaPredicted RBP20.78■□□□□ 0.92
TRIM47-203ENST00000586495 ZHX2Q9Y6X8 837 aa20.78■□□□□ 0.92
TRIM47-203ENST00000586495 PLCG2P16885 1265 aa20.77■□□□□ 0.92
TRIM47-203ENST00000586495 HSP90AB4PQ58FF6 505 aa20.77■□□□□ 0.92
TRIM47-203ENST00000586495 TEX11Q8IYF3 940 aa20.77■□□□□ 0.92
TRIM47-203ENST00000586495 OSBPL5Q9H0X9 879 aaPredicted RBP20.77■□□□□ 0.92
TRIM47-203ENST00000586495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRIM47-203ENST00000586495 DBNLQ9UJU6 430 aaKnown RBP20.77■□□□□ 0.92
TRIM47-203ENST00000586495 CYP2E1P05181 493 aaPredicted RBP20.76■□□□□ 0.91
TRIM47-203ENST00000586495 ZAP70P43403 619 aa20.76■□□□□ 0.91
TRIM47-203ENST00000586495 FASTKD5Q7L8L6 764 aaKnown RBP20.76■□□□□ 0.91
TRIM47-203ENST00000586495 EAF2Q96CJ1 260 aaPredicted RBP20.76■□□□□ 0.91
TRIM47-203ENST00000586495 COL2A1P02458 1487 aaPredicted RBP20.75■□□□□ 0.91
TRIM47-203ENST00000586495 GNRH1P01148 92 aa20.75■□□□□ 0.91
TRIM47-203ENST00000586495 LACTBP83111 547 aaPredicted RBP20.75■□□□□ 0.91
TRIM47-203ENST00000586495 MOGSQ13724 837 aa20.75■□□□□ 0.91
TRIM47-203ENST00000586495 C17orf99Q6UX52 265 aa20.75■□□□□ 0.91
TRIM47-203ENST00000586495 CHMP4BQ9H444 224 aaKnown RBP20.75■□□□□ 0.91
TRIM47-203ENST00000586495 AATFQ9NY61 560 aaKnown RBP eCLIP20.75■□□□□ 0.91
TRIM47-203ENST00000586495 DDX19BQ9UMR2 479 aa20.75■□□□□ 0.91
TRIM47-203ENST00000586495 EXOC6BQ9Y2D4 811 aa20.75■□□□□ 0.91
TRIM47-203ENST00000586495 AFG3L2Q9Y4W6 797 aa20.75■□□□□ 0.91
TRIM47-203ENST00000586495 A0A0G2JLL6 359 aaPredicted RBP20.74■□□□□ 0.91
TRIM47-203ENST00000586495 PPP4CP60510 307 aa20.74■□□□□ 0.91
TRIM47-203ENST00000586495 CAP1Q01518 475 aa20.74■□□□□ 0.91
TRIM47-203ENST00000586495 PRRT2Q7Z6L0 340 aaPredicted RBP20.74■□□□□ 0.91
TRIM47-203ENST00000586495 NBPF11Q86T75 865 aa20.74■□□□□ 0.91
TRIM47-203ENST00000586495 RPAP2Q8IXW5 612 aaPredicted RBP20.74■□□□□ 0.91
TRIM47-203ENST00000586495 SH3RF3Q8TEJ3 882 aaPredicted RBP20.74■□□□□ 0.91
TRIM47-203ENST00000586495 ARMC5Q96C12 935 aa20.74■□□□□ 0.91
TRIM47-203ENST00000586495 PARK7Q99497 189 aaKnown RBP20.74■□□□□ 0.91
TRIM47-203ENST00000586495 DHX36Q9H2U1 1008 aaKnown RBP20.74■□□□□ 0.91
TRIM47-203ENST00000586495 TLR7Q9NYK1 1049 aaKnown RBP20.74■□□□□ 0.91
TRIM47-203ENST00000586495 CPA4Q9UI42 421 aa20.74■□□□□ 0.91
TRIM47-203ENST00000586495 SLURP2P0DP57 97 aa20.73■□□□□ 0.91
TRIM47-203ENST00000586495 PRMT2P55345 433 aa20.73■□□□□ 0.91
TRIM47-203ENST00000586495 HERC5Q9UII4 1024 aaKnown RBP20.73■□□□□ 0.91
TRIM47-203ENST00000586495 HMMRO75330 724 aa20.72■□□□□ 0.91
TRIM47-203ENST00000586495 GPAT2Q6NUI2 795 aa20.72■□□□□ 0.91
TRIM47-203ENST00000586495 GADL1Q6ZQY3 521 aa20.72■□□□□ 0.91
TRIM47-203ENST00000586495 AACSQ86V21 672 aa20.72■□□□□ 0.91
TRIM47-203ENST00000586495 PI4KBQ9UBF8 816 aa20.72■□□□□ 0.91
TRIM47-203ENST00000586495 RCAN3Q9UKA8 241 aa20.72■□□□□ 0.91
TRIM47-203ENST00000586495 COG6Q9Y2V7 657 aa20.72■□□□□ 0.91
TRIM47-203ENST00000586495 PTCH2Q9Y6C5 1203 aa20.72■□□□□ 0.91
TRIM47-203ENST00000586495 HOXD10P28358 340 aa20.71■□□□□ 0.91
TRIM47-203ENST00000586495 SLC9C1Q4G0N8 1177 aa20.71■□□□□ 0.91
TRIM47-203ENST00000586495 CERS3Q8IU89 383 aa20.71■□□□□ 0.91
TRIM47-203ENST00000586495 RHPN1Q8TCX5 695 aa20.71■□□□□ 0.91
TRIM47-203ENST00000586495 TGFBRAP1Q8WUH2 860 aa20.71■□□□□ 0.91
TRIM47-203ENST00000586495 TBC1D2Q9BYX2 928 aa20.71■□□□□ 0.91
TRIM47-203ENST00000586495 ARHGAP39Q9C0H5 1083 aa20.71■□□□□ 0.91
TRIM47-203ENST00000586495 PIH1D3Q9NQM4 214 aaKnown RBP20.71■□□□□ 0.91
TRIM47-203ENST00000586495 SLC45A1Q9Y2W3 748 aa20.71■□□□□ 0.91
TRIM47-203ENST00000586495 TRIM75PA6NK02 468 aa20.7■□□□□ 0.9
TRIM47-203ENST00000586495 FAM196BA6NMK8 535 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms