RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 CXCL11O14625 94 aa18.69■□□□□ 0.58
SF3A2-202ENST00000586396 PRDX5P30044 214 aa18.69■□□□□ 0.58
SF3A2-202ENST00000586396 RFX5P48382 616 aaPredicted RBP18.69■□□□□ 0.58
SF3A2-202ENST00000586396 LPIN2Q92539 896 aa18.69■□□□□ 0.58
SF3A2-202ENST00000586396 FAM198AQ9UFP1 575 aa18.69■□□□□ 0.58
SF3A2-202ENST00000586396 GABRQQ9UN88 632 aa18.69■□□□□ 0.58
SF3A2-202ENST00000586396 CUL9Q8IWT3 2517 aa18.68■□□□□ 0.58
SF3A2-202ENST00000586396 ZBTB7BO15156 539 aaPredicted RBP18.68■□□□□ 0.58
SF3A2-202ENST00000586396 ADCY3O60266 1144 aa18.68■□□□□ 0.58
SF3A2-202ENST00000586396 LDHBP07195 334 aaKnown RBP18.68■□□□□ 0.58
SF3A2-202ENST00000586396 GPAT2Q6NUI2 795 aa18.68■□□□□ 0.58
SF3A2-202ENST00000586396 MIER1Q8N108 512 aa18.68■□□□□ 0.58
SF3A2-202ENST00000586396 PICK1Q9NRD5 415 aa18.68■□□□□ 0.58
SF3A2-202ENST00000586396 NOB1Q9ULX3 412 aaKnown RBP18.68■□□□□ 0.58
SF3A2-202ENST00000586396 LAMA2P24043 3122 aaKnown RBP18.68■□□□□ 0.58
SF3A2-202ENST00000586396 ATRNL1Q5VV63 1379 aa18.68■□□□□ 0.58
SF3A2-202ENST00000586396 A0A0G2JLL6 359 aaPredicted RBP18.67■□□□□ 0.58
SF3A2-202ENST00000586396 A0A1W2PPC1 479 aa18.67■□□□□ 0.58
SF3A2-202ENST00000586396 EVI5O60447 810 aa18.67■□□□□ 0.58
SF3A2-202ENST00000586396 ELNP15502 786 aa18.67■□□□□ 0.58
SF3A2-202ENST00000586396 GADL1Q6ZQY3 521 aa18.67■□□□□ 0.58
SF3A2-202ENST00000586396 FASTKD5Q7L8L6 764 aaKnown RBP18.67■□□□□ 0.58
SF3A2-202ENST00000586396 PRRT2Q7Z6L0 340 aaPredicted RBP18.67■□□□□ 0.58
SF3A2-202ENST00000586396 SCYL3Q8IZE3 742 aa18.67■□□□□ 0.58
SF3A2-202ENST00000586396 SMCR8Q8TEV9 937 aaPredicted RBP18.67■□□□□ 0.58
SF3A2-202ENST00000586396 USP40Q9NVE5 1235 aa18.67■□□□□ 0.58
SF3A2-202ENST00000586396 EYA2O00167 538 aa18.66■□□□□ 0.58
SF3A2-202ENST00000586396 TNPO2O14787 897 aaKnown RBP18.66■□□□□ 0.58
SF3A2-202ENST00000586396 SGPL1O95470 568 aa18.66■□□□□ 0.58
SF3A2-202ENST00000586396 INHAP05111 366 aa18.66■□□□□ 0.58
SF3A2-202ENST00000586396 FLT3LGP49771 235 aa18.66■□□□□ 0.58
SF3A2-202ENST00000586396 HDAC5Q9UQL6 1122 aa18.66■□□□□ 0.58
SF3A2-202ENST00000586396 ZHX2Q9Y6X8 837 aa18.66■□□□□ 0.58
SF3A2-202ENST00000586396 LOC285556D6RIA3 1793 aa18.65■□□□□ 0.58
SF3A2-202ENST00000586396 ATAD5Q96QE3 1844 aa18.65■□□□□ 0.58
SF3A2-202ENST00000586396 MTX1Q13505 466 aa18.65■□□□□ 0.58
SF3A2-202ENST00000586396 SLC17A8Q8NDX2 589 aa18.65■□□□□ 0.58
SF3A2-202ENST00000586396 DEFB118Q96PH6 123 aa18.65■□□□□ 0.58
SF3A2-202ENST00000586396 GNL3LQ9NVN8 582 aaKnown RBP18.65■□□□□ 0.58
SF3A2-202ENST00000586396 TAOK2Q9UL54 1235 aa18.65■□□□□ 0.58
SF3A2-202ENST00000586396 DOCK3Q8IZD9 2030 aa18.65■□□□□ 0.58
SF3A2-202ENST00000586396 CIAO1O76071 339 aa18.64■□□□□ 0.57
SF3A2-202ENST00000586396 TFRCP02786 760 aaKnown RBP18.64■□□□□ 0.57
SF3A2-202ENST00000586396 PTPRAP18433 802 aa18.64■□□□□ 0.57
SF3A2-202ENST00000586396 RGS3P49796 1198 aa18.64■□□□□ 0.57
SF3A2-202ENST00000586396 ATP2B3Q16720 1220 aa18.64■□□□□ 0.57
SF3A2-202ENST00000586396 ZSCAN29Q8IWY8 852 aaPredicted RBP18.64■□□□□ 0.57
SF3A2-202ENST00000586396 ZFPM1Q8IX07 1006 aa18.64■□□□□ 0.57
SF3A2-202ENST00000586396 PXYLP1Q8TE99 480 aa18.64■□□□□ 0.57
SF3A2-202ENST00000586396 SLC45A1Q9Y2W3 748 aa18.64■□□□□ 0.57
SF3A2-202ENST00000586396 ZBED9Q6R2W3 1325 aa18.64■□□□□ 0.57
SF3A2-202ENST00000586396 RFX7Q2KHR2 1363 aa18.64■□□□□ 0.57
SF3A2-202ENST00000586396 DNAH12Q6ZR08 3092 aa18.63■□□□□ 0.57
SF3A2-202ENST00000586396 PHF20L1A8MW92 1017 aa18.63■□□□□ 0.57
SF3A2-202ENST00000586396 UBTFL1P0CB47 393 aaPredicted RBP18.63■□□□□ 0.57
SF3A2-202ENST00000586396 IRF5Q13568 498 aa18.63■□□□□ 0.57
SF3A2-202ENST00000586396 SIL1Q9H173 461 aa18.63■□□□□ 0.57
SF3A2-202ENST00000586396 AFG3L2Q9Y4W6 797 aa18.63■□□□□ 0.57
SF3A2-202ENST00000586396 LRRFIP2Q9Y608 721 aaKnown RBP18.63■□□□□ 0.57
SF3A2-202ENST00000586396 SALL1Q9NSC2 1324 aa18.63■□□□□ 0.57
SF3A2-202ENST00000586396 TRIM75PA6NK02 468 aa18.62■□□□□ 0.57
SF3A2-202ENST00000586396 DLL1O00548 723 aa18.62■□□□□ 0.57
SF3A2-202ENST00000586396 ENTPD3O75355 529 aa18.62■□□□□ 0.57
SF3A2-202ENST00000586396 CAPN2P17655 700 aa18.62■□□□□ 0.57
SF3A2-202ENST00000586396 ATG9AQ7Z3C6 839 aa18.62■□□□□ 0.57
SF3A2-202ENST00000586396 PAK6Q9NQU5 681 aaPredicted RBP18.62■□□□□ 0.57
SF3A2-202ENST00000586396 DENND2AQ9ULE3 1009 aa18.62■□□□□ 0.57
SF3A2-202ENST00000586396 DDX60LQ5H9U9 1706 aaKnown RBP18.61■□□□□ 0.57
SF3A2-202ENST00000586396 SOX1O00570 391 aaPredicted RBP18.61■□□□□ 0.57
SF3A2-202ENST00000586396 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
SF3A2-202ENST00000586396 TRIM27P14373 513 aa18.61■□□□□ 0.57
SF3A2-202ENST00000586396 DZIP1Q86YF9 867 aaKnown RBP18.61■□□□□ 0.57
SF3A2-202ENST00000586396 ZGPATQ8N5A5 531 aaKnown RBP18.61■□□□□ 0.57
SF3A2-202ENST00000586396 COA7Q96BR5 231 aa18.61■□□□□ 0.57
SF3A2-202ENST00000586396 LRCH3Q96II8 777 aa18.61■□□□□ 0.57
SF3A2-202ENST00000586396 IDI2Q9BXS1 227 aa18.61■□□□□ 0.57
SF3A2-202ENST00000586396 COPRSQ9NQ92 184 aa18.61■□□□□ 0.57
SF3A2-202ENST00000586396 GAKO14976 1311 aa18.6■□□□□ 0.57
SF3A2-202ENST00000586396 SEMA3EO15041 775 aa18.6■□□□□ 0.57
SF3A2-202ENST00000586396 PHKA1P46020 1223 aa18.6■□□□□ 0.57
SF3A2-202ENST00000586396 PICALMQ13492 652 aa18.6■□□□□ 0.57
SF3A2-202ENST00000586396 ATF7IPQ6VMQ6 1270 aa18.6■□□□□ 0.57
SF3A2-202ENST00000586396 ANKRD13CQ8N6S4 541 aa18.6■□□□□ 0.57
SF3A2-202ENST00000586396 PAWRQ96IZ0 340 aaKnown RBP18.6■□□□□ 0.57
SF3A2-202ENST00000586396 STAP2Q9UGK3 403 aa18.6■□□□□ 0.57
SF3A2-202ENST00000586396 PNMA3Q9UL41 463 aa18.6■□□□□ 0.57
SF3A2-202ENST00000586396 AGTPBP1Q9UPW5 1226 aa18.6■□□□□ 0.57
SF3A2-202ENST00000586396 VCANP13611 3396 aa18.59■□□□□ 0.57
SF3A2-202ENST00000586396 CTNND1O60716 968 aaKnown RBP18.59■□□□□ 0.57
SF3A2-202ENST00000586396 GNAI3P08754 354 aa18.59■□□□□ 0.57
SF3A2-202ENST00000586396 FAM110CQ1W6H9 321 aa18.59■□□□□ 0.57
SF3A2-202ENST00000586396 SH3BP5LQ7L8J4 393 aa18.59■□□□□ 0.57
SF3A2-202ENST00000586396 NECAB2Q7Z6G3 386 aa18.59■□□□□ 0.57
SF3A2-202ENST00000586396 MEIS3Q99687 375 aa18.59■□□□□ 0.57
SF3A2-202ENST00000586396 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.59■□□□□ 0.571e-6■■■■□ 22
SF3A2-202ENST00000586396 CEP126Q9P2H0 1117 aa18.59■□□□□ 0.57
SF3A2-202ENST00000586396 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.59■□□□□ 0.57
SF3A2-202ENST00000586396 EYSQ5T1H1 3165 aa18.59■□□□□ 0.57
SF3A2-202ENST00000586396 DDTLA6NHG4 134 aaPredicted RBP18.58■□□□□ 0.56
SF3A2-202ENST00000586396 SLF2Q8IX21 1173 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms