RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 RNF186Q9NXI6 227 aa12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 CDK5RAP2Q96SN8 1893 aa12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 CASP8AP2Q9UKL3 1982 aa12.67□□□□□ -0.38
SMARCA4-209ENST00000586122 SPDYE5A6NIY4 337 aa12.66□□□□□ -0.38
SMARCA4-209ENST00000586122 IDH1O75874 414 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-209ENST00000586122 ERO1BQ86YB8 467 aa12.66□□□□□ -0.38
SMARCA4-209ENST00000586122 ZSCAN29Q8IWY8 852 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-209ENST00000586122 TNS4Q8IZW8 715 aa12.66□□□□□ -0.38
SMARCA4-209ENST00000586122 ELP3Q9H9T3 547 aa12.66□□□□□ -0.38
SMARCA4-209ENST00000586122 PIH1D3Q9NQM4 214 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-209ENST00000586122 ZNF112Q9UJU3 913 aa12.66□□□□□ -0.38
SMARCA4-209ENST00000586122 MYH7P12883 1935 aa12.66□□□□□ -0.38
SMARCA4-209ENST00000586122 TBC1D12O60347 775 aa12.65□□□□□ -0.38
SMARCA4-209ENST00000586122 TRPA1O75762 1119 aa12.65□□□□□ -0.38
SMARCA4-209ENST00000586122 ATP5JP18859 108 aa12.65□□□□□ -0.38
SMARCA4-209ENST00000586122 GTF2A2P52657 109 aa12.65□□□□□ -0.38
SMARCA4-209ENST00000586122 MAP3K10Q02779 954 aa12.65□□□□□ -0.38
SMARCA4-209ENST00000586122 NOL9Q5SY16 702 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-209ENST00000586122 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
SMARCA4-209ENST00000586122 OPTNQ96CV9 577 aa12.65□□□□□ -0.38
SMARCA4-209ENST00000586122 GPATCH3Q96I76 525 aa12.65□□□□□ -0.38
SMARCA4-209ENST00000586122 DHX36Q9H2U1 1008 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-209ENST00000586122 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 CYP7A1P22680 504 aa12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 PPATQ06203 517 aa12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 MKRN3Q13064 507 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 PPIL2Q13356 520 aa12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 PICALMQ13492 652 aa12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 MIGA2Q7L4E1 593 aa12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 IFNL1Q8IU54 200 aa12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 CRBNQ96SW2 442 aa12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 OSBPL5Q9H0X9 879 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 DDX4Q9NQI0 724 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 AATFQ9NY61 560 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 PCDHB15Q9Y5E8 787 aa12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 SNCAIPQ9Y6H5 919 aa12.64□□□□□ -0.39
SMARCA4-209ENST00000586122 DOCK1Q14185 1865 aa12.63□□□□□ -0.39
SMARCA4-209ENST00000586122 ZFPM1Q8IX07 1006 aa12.63□□□□□ -0.39
SMARCA4-209ENST00000586122 MAGEB6Q8N7X4 407 aa12.63□□□□□ -0.39
SMARCA4-209ENST00000586122 HAUS7Q99871 368 aa12.63□□□□□ -0.39
SMARCA4-209ENST00000586122 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.63□□□□□ -0.393e-14■■□□□ 12
SMARCA4-209ENST00000586122 ZCCHC17Q9NP64 241 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-209ENST00000586122 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
SMARCA4-209ENST00000586122 HERC5Q9UII4 1024 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-209ENST00000586122 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
SMARCA4-209ENST00000586122 MYH1P12882 1939 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 DDTLA6NHG4 134 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 CETPP11597 493 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 GJA5P36382 358 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 SNAPC2Q13487 334 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 HDAC1Q13547 482 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 IFFO2Q5TF58 517 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 SH3BP5LQ7L8J4 393 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 ADGRA1Q86SQ6 560 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 SCYL3Q8IZE3 742 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 SH3RF3Q8TEJ3 882 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 ZKSCAN4Q969J2 545 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 GCC1Q96CN9 775 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 OTUD5Q96G74 571 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 DNAJC2Q99543 621 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 ANTXR1Q9H6X2 564 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 PAG1Q9NWQ8 432 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 PI4KBQ9UBF8 816 aa12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-209ENST00000586122 PHF20L1A8MW92 1017 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 GOLIM4O00461 696 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 PDE6AP16499 860 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 INPP5BP32019 993 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 SLC9C2Q5TAH2 1124 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 ZSCAN25Q6NSZ9 544 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 FOXP4Q8IVH2 680 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 TBC1D2Q9BYX2 928 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 BOLA2Q9H3K6 86 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 PICK1Q9NRD5 415 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 FLT1P17948 1338 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 TTC41PQ6P2S7 1318 aa12.61□□□□□ -0.39
SMARCA4-209ENST00000586122 CCL15-CCL14A0A0B4J2E2 113 aa12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 IGF2BP3O00425 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 HLA-DOAP06340 250 aa12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 CCL15Q16663 113 aa12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 TGFBRAP1Q8WUH2 860 aa12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 GINM1Q9NU53 330 aa12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 KCNH4Q9UQ05 1017 aa12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 NDUFB9Q9Y6M9 179 aa12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 ATAD5Q96QE3 1844 aa12.6□□□□□ -0.39
SMARCA4-209ENST00000586122 PTPRFP10586 1907 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 MAGEB6P1A0A0J9YX57 407 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 GPR25O00155 361 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 CXCL11O14625 94 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 IRF6O14896 467 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 ERC2O15083 957 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 SMARCA5O60264 1052 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 USP5P45974 858 aa12.59□□□□□ -0.39
SMARCA4-209ENST00000586122 UBE3CQ15386 1083 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms