RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 MGAMO43451 1857 aa13.09□□□□□ -0.31
MBD3-203ENST00000585903 TBC1D12O60347 775 aa13.09□□□□□ -0.31
MBD3-203ENST00000585903 CTNND1O60716 968 aaKnown RBP13.09□□□□□ -0.31
MBD3-203ENST00000585903 EN2P19622 333 aaPredicted RBP13.09□□□□□ -0.31
MBD3-203ENST00000585903 RANBP2P49792 3224 aaKnown RBP13.09□□□□□ -0.31
MBD3-203ENST00000585903 TCP10Q12799 353 aa13.09□□□□□ -0.31
MBD3-203ENST00000585903 MOGSQ13724 837 aa13.09□□□□□ -0.31
MBD3-203ENST00000585903 FASTKD5Q7L8L6 764 aaKnown RBP13.09□□□□□ -0.31
MBD3-203ENST00000585903 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
MBD3-203ENST00000585903 SCYL3Q8IZE3 742 aa13.09□□□□□ -0.31
MBD3-203ENST00000585903 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.09□□□□□ -0.31
MBD3-203ENST00000585903 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
MBD3-203ENST00000585903 TBC1D2Q9BYX2 928 aa13.09□□□□□ -0.31
MBD3-203ENST00000585903 TRIOBPQ9H2D6 2365 aa13.09□□□□□ -0.31
MBD3-203ENST00000585903 PHIPQ8WWQ0 1821 aa13.09□□□□□ -0.31
MBD3-203ENST00000585903 CEP290O15078 2479 aa13.08□□□□□ -0.31
MBD3-203ENST00000585903 GPR75-ASB3A0A0A6YYF3 556 aa13.08□□□□□ -0.32
MBD3-203ENST00000585903 A0A0G2JLL6 359 aaPredicted RBP13.08□□□□□ -0.32
MBD3-203ENST00000585903 DLL1O00548 723 aa13.08□□□□□ -0.32
MBD3-203ENST00000585903 RGS3P49796 1198 aa13.08□□□□□ -0.32
MBD3-203ENST00000585903 GSTO1P78417 241 aa13.08□□□□□ -0.32
MBD3-203ENST00000585903 PRRT2Q7Z6L0 340 aaPredicted RBP13.08□□□□□ -0.32
MBD3-203ENST00000585903 XAGE2Q96GT9 111 aa13.08□□□□□ -0.32
MBD3-203ENST00000585903 PICK1Q9NRD5 415 aa13.08□□□□□ -0.32
MBD3-203ENST00000585903 SRRDQ9UH36 339 aa13.08□□□□□ -0.32
MBD3-203ENST00000585903 PA2G4Q9UQ80 394 aaKnown RBP13.08□□□□□ -0.32
MBD3-203ENST00000585903 MROH7-TTC4A0A0A0MT08 1334 aa13.08□□□□□ -0.32
MBD3-203ENST00000585903 GNAI2P04899 355 aa13.07□□□□□ -0.32
MBD3-203ENST00000585903 LDHCP07864 332 aa13.07□□□□□ -0.32
MBD3-203ENST00000585903 PTPRAP18433 802 aa13.07□□□□□ -0.32
MBD3-203ENST00000585903 ARID4AP29374 1257 aaPredicted RBP13.07□□□□□ -0.32
MBD3-203ENST00000585903 ADORA1P30542 326 aa13.07□□□□□ -0.32
MBD3-203ENST00000585903 TIMM10P62072 90 aa13.07□□□□□ -0.32
MBD3-203ENST00000585903 ATF7IPQ6VMQ6 1270 aa13.07□□□□□ -0.32
MBD3-203ENST00000585903 ERICH6Q7L0X2 663 aa13.07□□□□□ -0.32
MBD3-203ENST00000585903 NKX2-3Q8TAU0 364 aa13.07□□□□□ -0.32
MBD3-203ENST00000585903 GPR108Q9NPR9 543 aa13.07□□□□□ -0.32
MBD3-203ENST00000585903 COL6A3P12111 3177 aa13.07□□□□□ -0.32
MBD3-203ENST00000585903 BCRP11274 1271 aa13.06□□□□□ -0.32
MBD3-203ENST00000585903 TRIM27P14373 513 aa13.06□□□□□ -0.32
MBD3-203ENST00000585903 TFCP2Q12800 502 aa13.06□□□□□ -0.32
MBD3-203ENST00000585903 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
MBD3-203ENST00000585903 AFG3L2Q9Y4W6 797 aa13.06□□□□□ -0.32
MBD3-203ENST00000585903 ZSWIM8A7E2V4 1837 aa13.06□□□□□ -0.32
MBD3-203ENST00000585903 MAST2Q6P0Q8 1798 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 UQCRFS1P1P0C7P4 283 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 BTDP43251 543 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 PSMC4P43686 418 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 RHBDL3P58872 404 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 MECOMQ03112 1051 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 SLC4A8Q2Y0W8 1093 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 SH3BP5LQ7L8J4 393 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 ZFPM1Q8IX07 1006 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 SPATA5Q8NB90 893 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 TRIM47Q96LD4 638 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 ARHGAP39Q9C0H5 1083 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 OSBPL5Q9H0X9 879 aaPredicted RBP13.05□□□□□ -0.32
MBD3-203ENST00000585903 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
MBD3-203ENST00000585903 A0A0C4DFX4 3053 aa13.04□□□□□ -0.32
MBD3-203ENST00000585903 GRK4P32298 578 aa13.04□□□□□ -0.32
MBD3-203ENST00000585903 FCGRTP55899 365 aa13.04□□□□□ -0.32
MBD3-203ENST00000585903 TMED8Q6PL24 325 aaPredicted RBP13.04□□□□□ -0.32
MBD3-203ENST00000585903 ZSCAN29Q8IWY8 852 aaPredicted RBP13.04□□□□□ -0.32
MBD3-203ENST00000585903 PROCA1Q8NCQ7 364 aaPredicted RBP13.04□□□□□ -0.32
MBD3-203ENST00000585903 NSUN4Q96CB9 384 aaKnown RBP13.04□□□□□ -0.32
MBD3-203ENST00000585903 ZNF512BQ96KM6 892 aaPredicted RBP13.04□□□□□ -0.32
MBD3-203ENST00000585903 HMG20BQ9P0W2 317 aa13.04□□□□□ -0.32
MBD3-203ENST00000585903 CPA4Q9UI42 421 aa13.04□□□□□ -0.32
MBD3-203ENST00000585903 ZHX2Q9Y6X8 837 aa13.04□□□□□ -0.32
MBD3-203ENST00000585903 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
MBD3-203ENST00000585903 FOCADQ5VW36 1801 aa13.04□□□□□ -0.32
MBD3-203ENST00000585903 DDTLA6NHG4 134 aaPredicted RBP13.03□□□□□ -0.32
MBD3-203ENST00000585903 H0YGN5 161 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 PLCG2P16885 1265 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 OSBPP22059 807 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 G3BP1Q13283 466 aaKnown RBP eCLIP13.03□□□□□ -0.32
MBD3-203ENST00000585903 GORABQ5T7V8 394 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 RAET1EQ8TD07 263 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 ZNF384Q8TF68 577 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 DHX36Q9H2U1 1008 aaKnown RBP13.03□□□□□ -0.32
MBD3-203ENST00000585903 DDX4Q9NQI0 724 aaKnown RBP13.03□□□□□ -0.32
MBD3-203ENST00000585903 GINM1Q9NU53 330 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 HERC5Q9UII4 1024 aaKnown RBP13.03□□□□□ -0.32
MBD3-203ENST00000585903 PNMA3Q9UL41 463 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 ATAD5Q96QE3 1844 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 MYPNQ86TC9 1320 aa13.03□□□□□ -0.32
MBD3-203ENST00000585903 CUL9Q8IWT3 2517 aa13.02□□□□□ -0.32
MBD3-203ENST00000585903 FMNL1O95466 1100 aaPredicted RBP13.02□□□□□ -0.33
MBD3-203ENST00000585903 GJB1P08034 283 aa13.02□□□□□ -0.33
MBD3-203ENST00000585903 CTGFP29279 349 aa13.02□□□□□ -0.33
MBD3-203ENST00000585903 IRF5Q13568 498 aa13.02□□□□□ -0.33
MBD3-203ENST00000585903 POLA2Q14181 598 aa13.02□□□□□ -0.33
MBD3-203ENST00000585903 CERS3Q8IU89 383 aa13.02□□□□□ -0.33
MBD3-203ENST00000585903 SLC17A8Q8NDX2 589 aa13.02□□□□□ -0.33
MBD3-203ENST00000585903 PXYLP1Q8TE99 480 aa13.02□□□□□ -0.33
MBD3-203ENST00000585903 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
MBD3-203ENST00000585903 NEUROD6Q96NK8 337 aa13.02□□□□□ -0.33
MBD3-203ENST00000585903 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.33
MBD3-203ENST00000585903 GJA8P48165 433 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms