RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	MAP4K4	O95819	1239 aa	Predicted RBP	20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	LDHC	P07864	332 aa		20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	C20orf194	Q5TEA3	1177 aa		20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	MIGA2	Q7L4E1	593 aa		20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	CTU1	Q7Z7A3	348 aa	Known RBP	20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	ERO1B	Q86YB8	467 aa		20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	ZFPM1	Q8IX07	1006 aa		20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	SIRT2	Q8IXJ6	389 aa		20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	ZKSCAN4	Q969J2	545 aa	Predicted RBP	20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	CCDC8	Q9H0W5	538 aa	Predicted RBP	20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	DDX4	Q9NQI0	724 aa	Known RBP	20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	SNRK	Q9NRH2	765 aa		20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	ZNF112	Q9UJU3	913 aa		20.22	■□□□□ 0.83
CIRBP-204	ENST00000585630	NPM3	O75607	178 aa	Known RBP	20.21	■□□□□ 0.83
CIRBP-204	ENST00000585630	CYP2E1	P05181	493 aa	Predicted RBP	20.21	■□□□□ 0.83
CIRBP-204	ENST00000585630	INPP5B	P32019	993 aa		20.21	■□□□□ 0.83
CIRBP-204	ENST00000585630	GTF2A2	P52657	109 aa		20.21	■□□□□ 0.83
CIRBP-204	ENST00000585630	R3HDML	Q9H3Y0	253 aa		20.21	■□□□□ 0.83
CIRBP-204	ENST00000585630	IGSF3	O75054	1194 aa		20.2	■□□□□ 0.82
CIRBP-204	ENST00000585630	ZAP70	P43403	619 aa		20.2	■□□□□ 0.82
CIRBP-204	ENST00000585630	PPIL2	Q13356	520 aa		20.2	■□□□□ 0.82
CIRBP-204	ENST00000585630	NOL9	Q5SY16	702 aa	Known RBP	20.2	■□□□□ 0.82
CIRBP-204	ENST00000585630	OTUD7B	Q6GQQ9	843 aa		20.2	■□□□□ 0.82
CIRBP-204	ENST00000585630	SH3BP5L	Q7L8J4	393 aa		20.2	■□□□□ 0.82
CIRBP-204	ENST00000585630	AACS	Q86V21	672 aa		20.2	■□□□□ 0.82
CIRBP-204	ENST00000585630	BRI3BP	Q8WY22	251 aa		20.2	■□□□□ 0.82
CIRBP-204	ENST00000585630	PTPN18	Q99952	460 aa		20.2	■□□□□ 0.82
CIRBP-204	ENST00000585630	MYH7	P12883	1935 aa		20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	DDX60L	Q5H9U9	1706 aa	Known RBP	20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	HTT	P42858	3142 aa		20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	CCL15-CCL14	A0A0B4J2E2	113 aa		20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	PICALM	Q13492	652 aa		20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	CCL15	Q16663	113 aa		20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	NAA16	Q6N069	864 aa	Predicted RBP	20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	RHPN1	Q8TCX5	695 aa		20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	KIF1BP	Q96EK5	621 aa		20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	YTHDC1	Q96MU7	727 aa	Known RBP	20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	MYH1	P12882	1939 aa		20.19	■□□□□ 0.82
CIRBP-204	ENST00000585630	DDTL	A6NHG4	134 aa	Predicted RBP	20.18	■□□□□ 0.82
CIRBP-204	ENST00000585630	FKTN	O75072	461 aa		20.18	■□□□□ 0.82
CIRBP-204	ENST00000585630	CRHR2	Q13324	411 aa		20.18	■□□□□ 0.82
CIRBP-204	ENST00000585630	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	20.18	■□□□□ 0.82
CIRBP-204	ENST00000585630	IL1RAPL2	Q9NP60	686 aa		20.18	■□□□□ 0.82
CIRBP-204	ENST00000585630	NAV1	Q8NEY1	1877 aa		20.18	■□□□□ 0.82
CIRBP-204	ENST00000585630	IRF6	O14896	467 aa		20.17	■□□□□ 0.82
CIRBP-204	ENST00000585630	MAP3K10	Q02779	954 aa		20.17	■□□□□ 0.82
CIRBP-204	ENST00000585630	PPAT	Q06203	517 aa		20.17	■□□□□ 0.82
CIRBP-204	ENST00000585630	NOL10	Q9BSC4	688 aa	Known RBP	20.17	■□□□□ 0.82
CIRBP-204	ENST00000585630	PIH1D3	Q9NQM4	214 aa	Known RBP	20.17	■□□□□ 0.82
CIRBP-204	ENST00000585630	CETP	P11597	493 aa		20.16	■□□□□ 0.82
CIRBP-204	ENST00000585630	SNAPC2	Q13487	334 aa		20.16	■□□□□ 0.82
CIRBP-204	ENST00000585630	OSBPL5	Q9H0X9	879 aa	Predicted RBP	20.16	■□□□□ 0.82
CIRBP-204	ENST00000585630	LOC285556	D6RIA3	1793 aa		20.16	■□□□□ 0.82
CIRBP-204	ENST00000585630	PHF20L1	A8MW92	1017 aa		20.15	■□□□□ 0.82
CIRBP-204	ENST00000585630	PLCG2	P16885	1265 aa		20.15	■□□□□ 0.82
CIRBP-204	ENST00000585630	ADGRA1	Q86SQ6	560 aa		20.15	■□□□□ 0.82
CIRBP-204	ENST00000585630	TEX11	Q8IYF3	940 aa		20.15	■□□□□ 0.82
CIRBP-204	ENST00000585630	CLASRP	Q8N2M8	674 aa	Known RBP	20.15	■□□□□ 0.82
CIRBP-204	ENST00000585630	FAM43A	Q8N2R8	423 aa		20.15	■□□□□ 0.82
CIRBP-204	ENST00000585630	ZCCHC17	Q9NP64	241 aa	Known RBP	20.15	■□□□□ 0.82
CIRBP-204	ENST00000585630	AATF	Q9NY61	560 aa	Known RBP eCLIP	20.15	■□□□□ 0.82
CIRBP-204	ENST00000585630	ZSWIM8	A7E2V4	1837 aa		20.15	■□□□□ 0.82
CIRBP-204	ENST00000585630	RAB11FIP3	O75154	756 aa		20.14	■□□□□ 0.81
CIRBP-204	ENST00000585630	BAG3	O95817	575 aa		20.14	■□□□□ 0.81
CIRBP-204	ENST00000585630	PPP4C	P60510	307 aa		20.14	■□□□□ 0.81
CIRBP-204	ENST00000585630	PKN2	Q16513	984 aa	Known RBP	20.14	■□□□□ 0.81
CIRBP-204	ENST00000585630	SCYL3	Q8IZE3	742 aa		20.14	■□□□□ 0.81
CIRBP-204	ENST00000585630	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	20.14	■□□□□ 0.81
CIRBP-204	ENST00000585630	KCNH4	Q9UQ05	1017 aa		20.14	■□□□□ 0.81
CIRBP-204	ENST00000585630	APBB1	O00213	710 aa		20.13	■□□□□ 0.81
CIRBP-204	ENST00000585630	TAF1C	Q15572	869 aa	Predicted RBP	20.13	■□□□□ 0.81
CIRBP-204	ENST00000585630	NDUFB9	Q9Y6M9	179 aa		20.13	■□□□□ 0.81
CIRBP-204	ENST00000585630	TBC1D12	O60347	775 aa		20.12	■□□□□ 0.81
CIRBP-204	ENST00000585630	IDH1	O75874	414 aa	Known RBP	20.12	■□□□□ 0.81
CIRBP-204	ENST00000585630	SLURP2	P0DP57	97 aa		20.12	■□□□□ 0.81
CIRBP-204	ENST00000585630	TMED8	Q6PL24	325 aa	Predicted RBP	20.12	■□□□□ 0.81
CIRBP-204	ENST00000585630	FLT1	P17948	1338 aa		20.11	■□□□□ 0.81
CIRBP-204	ENST00000585630	BTBD19	C9JJ37	291 aa		20.11	■□□□□ 0.81
CIRBP-204	ENST00000585630	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	20.11	■□□□□ 0.81
CIRBP-204	ENST00000585630	ANTXR1	Q9H6X2	564 aa		20.11	■□□□□ 0.81
CIRBP-204	ENST00000585630	ZFYVE28	Q9HCC9	887 aa		20.11	■□□□□ 0.81
CIRBP-204	ENST00000585630	PICK1	Q9NRD5	415 aa		20.11	■□□□□ 0.81
CIRBP-204	ENST00000585630	CTNND1	O60716	968 aa	Known RBP	20.1	■□□□□ 0.81
CIRBP-204	ENST00000585630	IFIT2	P09913	472 aa	Known RBP	20.1	■□□□□ 0.81
CIRBP-204	ENST00000585630	CYP7A1	P22680	504 aa		20.1	■□□□□ 0.81
CIRBP-204	ENST00000585630	MAP3K12	Q12852	859 aa		20.1	■□□□□ 0.81
CIRBP-204	ENST00000585630	FBXO46	Q6PJ61	603 aa	Predicted RBP	20.1	■□□□□ 0.81
CIRBP-204	ENST00000585630	CERS3	Q8IU89	383 aa		20.1	■□□□□ 0.81
CIRBP-204	ENST00000585630	ERO1A	Q96HE7	468 aa		20.1	■□□□□ 0.81
CIRBP-204	ENST00000585630	RBBP6	Q7Z6E9	1792 aa	Known RBP	20.1	■□□□□ 0.81
CIRBP-204	ENST00000585630	FAM196B	A6NMK8	535 aa		20.09	■□□□□ 0.81
CIRBP-204	ENST00000585630	PTPRA	P18433	802 aa		20.09	■□□□□ 0.81
CIRBP-204	ENST00000585630	MOGS	Q13724	837 aa		20.09	■□□□□ 0.81
CIRBP-204	ENST00000585630	TTF1	Q15361	905 aa	Predicted RBP	20.09	■□□□□ 0.81
CIRBP-204	ENST00000585630	ANKRD23	Q86SG2	305 aa		20.09	■□□□□ 0.81
CIRBP-204	ENST00000585630	MAGEB6	Q8N7X4	407 aa		20.09	■□□□□ 0.81
CIRBP-204	ENST00000585630	DHX36	Q9H2U1	1008 aa	Known RBP	20.09	■□□□□ 0.81
CIRBP-204	ENST00000585630	HERC5	Q9UII4	1024 aa	Known RBP	20.09	■□□□□ 0.81
CIRBP-204	ENST00000585630	HPS5	Q9UPZ3	1129 aa		20.09	■□□□□ 0.81
CIRBP-204	ENST00000585630	MGAM	O43451	1857 aa		20.09	■□□□□ 0.81

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