RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 E7EWF7 191 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 ECE2O60344 883 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 MAP2K2P36507 400 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 EXOSC10Q01780 885 aaKnown RBP12.29□□□□□ -0.44
LIG3-203ENST00000585370 SLFNL1Q499Z3 407 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 HHIPL1Q96JK4 782 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 EYA3Q99504 573 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 ZNF408Q9H9D4 720 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 RAI14Q9P0K7 980 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 SALL1Q9NSC2 1324 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 IRS2Q9Y4H2 1338 aa12.29□□□□□ -0.44
LIG3-203ENST00000585370 POLR2AP24928 1970 aaKnown RBP12.29□□□□□ -0.44
LIG3-203ENST00000585370 DDX11L8A8MPP1 907 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 GOLGA6L22H0YM25 854 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 APPP05067 770 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 CYP7A1P22680 504 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 MCM4P33991 863 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 TRDNQ13061 729 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 TBC1D10BQ4KMP7 808 aaPredicted RBP12.28□□□□□ -0.44
LIG3-203ENST00000585370 NAA16Q6N069 864 aaPredicted RBP12.28□□□□□ -0.44
LIG3-203ENST00000585370 GIMAP6Q6P9H5 292 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 CERS3Q8IU89 383 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 TDRD7Q8NHU6 1098 aaKnown RBP12.28□□□□□ -0.44
LIG3-203ENST00000585370 NCOA7Q8NI08 942 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 ZC3H12CQ9C0D7 883 aaKnown RBP12.28□□□□□ -0.44
LIG3-203ENST00000585370 ABCF2Q9UG63 623 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 THSD7BQ9C0I4 1608 aa12.28□□□□□ -0.44
LIG3-203ENST00000585370 FOXP2O15409 715 aa12.27□□□□□ -0.45
LIG3-203ENST00000585370 MBD4O95243 580 aa12.27□□□□□ -0.45
LIG3-203ENST00000585370 VIL1P09327 827 aaKnown RBP12.27□□□□□ -0.45
LIG3-203ENST00000585370 CPA1P15085 419 aa12.27□□□□□ -0.45
LIG3-203ENST00000585370 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
LIG3-203ENST00000585370 GSTO1P78417 241 aa12.27□□□□□ -0.45
LIG3-203ENST00000585370 FGD1P98174 961 aa12.27□□□□□ -0.45
LIG3-203ENST00000585370 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
LIG3-203ENST00000585370 TNPO1Q92973 898 aaKnown RBP12.27□□□□□ -0.45
LIG3-203ENST00000585370 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.45
LIG3-203ENST00000585370 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
LIG3-203ENST00000585370 SMC3Q9UQE7 1217 aa12.27□□□□□ -0.45
LIG3-203ENST00000585370 A0A1B0GUL6 1792 aa12.27□□□□□ -0.45
LIG3-203ENST00000585370 DOCK2Q92608 1830 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 MAGEB6P1A0A0J9YX57 407 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 UFL1O94874 794 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 LDHCP07864 332 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 MCM5P33992 734 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 TOB2Q14106 344 aaPredicted RBP12.26□□□□□ -0.45
LIG3-203ENST00000585370 Q6ZUG5 572 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 NOL8Q76FK4 1167 aaKnown RBP12.26□□□□□ -0.45
LIG3-203ENST00000585370 KRT26Q7Z3Y9 468 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 RALYLQ86SE5 291 aaKnown RBP12.26□□□□□ -0.45
LIG3-203ENST00000585370 IFNL3Q8IZI9 196 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 MTA3Q9BTC8 594 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 NAPBQ9H115 298 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 CNNM2Q9H8M5 875 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 IQSEC3Q9UPP2 1182 aaPredicted RBP12.26□□□□□ -0.45
LIG3-203ENST00000585370 SCN9AQ15858 1988 aa12.26□□□□□ -0.45
LIG3-203ENST00000585370 WTIPA6NIX2 430 aaPredicted RBP12.25□□□□□ -0.45
LIG3-203ENST00000585370 ADM5C9JUS6 153 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 PCP11498 1178 aaKnown RBP12.25□□□□□ -0.45
LIG3-203ENST00000585370 IL1R1P14778 569 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 PDCP20941 246 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 NT5C2P49902 561 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 EVCP57679 992 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 ME3Q16798 604 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 TTLL5Q6EMB2 1281 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 STOX1Q6ZVD7 989 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 TBC1D22AQ8WUA7 517 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 NSUN4Q96CB9 384 aaKnown RBP12.25□□□□□ -0.45
LIG3-203ENST00000585370 ZNF274Q96GC6 653 aaPredicted RBP12.25□□□□□ -0.45
LIG3-203ENST00000585370 ABHD8Q96I13 439 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 LLPHQ9BRT6 129 aaKnown RBP12.25□□□□□ -0.45
LIG3-203ENST00000585370 KRT23Q9C075 422 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 RNF41Q9H4P4 317 aaPredicted RBP12.25□□□□□ -0.45
LIG3-203ENST00000585370 TPCN1Q9ULQ1 816 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 TAF6LQ9Y6J9 622 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 SLC4A4Q9Y6R1 1079 aa12.25□□□□□ -0.45
LIG3-203ENST00000585370 GSG1L2A8MUP6 293 aa12.24□□□□□ -0.45
LIG3-203ENST00000585370 ASTN2O75129 1339 aaPredicted RBP12.24□□□□□ -0.45
LIG3-203ENST00000585370 BRD1O95696 1058 aa12.24□□□□□ -0.45
LIG3-203ENST00000585370 LDHBP07195 334 aaKnown RBP12.24□□□□□ -0.45
LIG3-203ENST00000585370 KLRK1P26718 216 aa12.24□□□□□ -0.45
LIG3-203ENST00000585370 HUNKP57058 714 aa12.24□□□□□ -0.45
LIG3-203ENST00000585370 CHAF1AQ13111 956 aaPredicted RBP12.24□□□□□ -0.45
LIG3-203ENST00000585370 KIF4BQ2VIQ3 1234 aa12.24□□□□□ -0.45
LIG3-203ENST00000585370 SKOR2Q2VWA4 1001 aaPredicted RBP12.24□□□□□ -0.45
LIG3-203ENST00000585370 DCPSQ96C86 337 aaKnown RBP12.24□□□□□ -0.45
LIG3-203ENST00000585370 COA1Q9GZY4 146 aa12.24□□□□□ -0.45
LIG3-203ENST00000585370 ARMT1Q9H993 441 aa12.24□□□□□ -0.45
LIG3-203ENST00000585370 CD209Q9NNX6 404 aa12.24□□□□□ -0.45
LIG3-203ENST00000585370 SUGT1Q9Y2Z0 365 aa12.24□□□□□ -0.45
LIG3-203ENST00000585370 KIF3AQ9Y496 699 aa12.24□□□□□ -0.45
LIG3-203ENST00000585370 FAM155AB1AL88 458 aaPredicted RBP12.23□□□□□ -0.45
LIG3-203ENST00000585370 G3V3G9 751 aa12.23□□□□□ -0.45
LIG3-203ENST00000585370 PFKFB2O60825 505 aa12.23□□□□□ -0.45
LIG3-203ENST00000585370 ZNF280AP59817 542 aaPredicted RBP12.23□□□□□ -0.45
LIG3-203ENST00000585370 MECOMQ03112 1051 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms