RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 PPP4CP60510 307 aa17.08■□□□□ 0.32
MKS1-213ENST00000585134 LCORLQ8N3X6 602 aa17.08■□□□□ 0.32
MKS1-213ENST00000585134 ARMT1Q9H993 441 aa17.08■□□□□ 0.32
MKS1-213ENST00000585134 SAP30BPQ9UHR5 308 aaKnown RBP17.08■□□□□ 0.32
MKS1-213ENST00000585134 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
MKS1-213ENST00000585134 FLT1P17948 1338 aa17.07■□□□□ 0.32
MKS1-213ENST00000585134 RNF113AO15541 343 aaKnown RBP17.07■□□□□ 0.32
MKS1-213ENST00000585134 UBE3CQ15386 1083 aa17.07■□□□□ 0.32
MKS1-213ENST00000585134 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
MKS1-213ENST00000585134 TMED8Q6PL24 325 aaPredicted RBP17.07■□□□□ 0.32
MKS1-213ENST00000585134 ARMC9Q7Z3E5 817 aa17.07■□□□□ 0.32
MKS1-213ENST00000585134 EVI5LQ96CN4 794 aa17.07■□□□□ 0.32
MKS1-213ENST00000585134 RIOK1Q9BRS2 568 aaKnown RBP17.07■□□□□ 0.32
MKS1-213ENST00000585134 OSBPL5Q9H0X9 879 aaPredicted RBP17.07■□□□□ 0.32
MKS1-213ENST00000585134 FOCADQ5VW36 1801 aa17.07■□□□□ 0.32
MKS1-213ENST00000585134 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
MKS1-213ENST00000585134 LRRFIP1Q32MZ4 808 aaKnown RBP17.06■□□□□ 0.32
MKS1-213ENST00000585134 CYP4F22Q6NT55 531 aa17.06■□□□□ 0.32
MKS1-213ENST00000585134 SH3BP5LQ7L8J4 393 aa17.06■□□□□ 0.32
MKS1-213ENST00000585134 SAPCD2Q86UD0 394 aa17.06■□□□□ 0.32
MKS1-213ENST00000585134 APPBP2Q92624 585 aa17.06■□□□□ 0.32
MKS1-213ENST00000585134 AIDAQ96BJ3 306 aa17.06■□□□□ 0.32
MKS1-213ENST00000585134 CSRNP1Q96S65 589 aa17.06■□□□□ 0.32
MKS1-213ENST00000585134 CRNKL1Q9BZJ0 848 aaKnown RBP17.06■□□□□ 0.32
MKS1-213ENST00000585134 OSBPL3Q9H4L5 887 aa17.06■□□□□ 0.32
MKS1-213ENST00000585134 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
MKS1-213ENST00000585134 OTOFQ9HC10 1997 aa17.06■□□□□ 0.32
MKS1-213ENST00000585134 DDTLA6NHG4 134 aaPredicted RBP17.05■□□□□ 0.32
MKS1-213ENST00000585134 ZFYP08048 801 aaPredicted RBP17.05■□□□□ 0.32
MKS1-213ENST00000585134 FKBP1BP68106 108 aa17.05■□□□□ 0.32
MKS1-213ENST00000585134 DEFB115Q30KQ5 88 aa17.05■□□□□ 0.32
MKS1-213ENST00000585134 CERS3Q8IU89 383 aa17.05■□□□□ 0.32
MKS1-213ENST00000585134 PUS7LQ9H0K6 701 aaKnown RBP17.05■□□□□ 0.32
MKS1-213ENST00000585134 RASSF10A6NK89 507 aa17.04■□□□□ 0.32
MKS1-213ENST00000585134 M0R2C6 588 aa17.04■□□□□ 0.32
MKS1-213ENST00000585134 SLURP2P0DP57 97 aa17.04■□□□□ 0.32
MKS1-213ENST00000585134 IREB2P48200 963 aaKnown RBP17.04■□□□□ 0.32
MKS1-213ENST00000585134 TTC22Q5TAA0 569 aa17.04■□□□□ 0.32
MKS1-213ENST00000585134 DCAF15Q66K64 600 aa17.04■□□□□ 0.32
MKS1-213ENST00000585134 MIGA2Q7L4E1 593 aa17.04■□□□□ 0.32
MKS1-213ENST00000585134 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
MKS1-213ENST00000585134 OSBP2Q969R2 916 aa17.04■□□□□ 0.32
MKS1-213ENST00000585134 HOOK2Q96ED9 719 aa17.04■□□□□ 0.32
MKS1-213ENST00000585134 COL2A1P02458 1487 aaPredicted RBP17.04■□□□□ 0.32
MKS1-213ENST00000585134 FAM196BA6NMK8 535 aa17.03■□□□□ 0.32
MKS1-213ENST00000585134 PRKAB2O43741 272 aa17.03■□□□□ 0.32
MKS1-213ENST00000585134 GSPT1P15170 499 aaKnown RBP17.03■□□□□ 0.32
MKS1-213ENST00000585134 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
MKS1-213ENST00000585134 CAPNS2Q96L46 248 aa17.03■□□□□ 0.32
MKS1-213ENST00000585134 DDX60LQ5H9U9 1706 aaKnown RBP17.03■□□□□ 0.32
MKS1-213ENST00000585134 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.32
MKS1-213ENST00000585134 MYH1P12882 1939 aa17.02■□□□□ 0.32
MKS1-213ENST00000585134 USP2O75604 605 aaPredicted RBP17.02■□□□□ 0.32
MKS1-213ENST00000585134 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
MKS1-213ENST00000585134 ZNF157P51786 506 aaPredicted RBP17.02■□□□□ 0.32
MKS1-213ENST00000585134 RGMBQ6NW40 437 aa17.02■□□□□ 0.32
MKS1-213ENST00000585134 CLMNQ96JQ2 1002 aa17.02■□□□□ 0.32
MKS1-213ENST00000585134 WRNIP1Q96S55 665 aa17.02■□□□□ 0.32
MKS1-213ENST00000585134 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
MKS1-213ENST00000585134 ZNF341Q9BYN7 854 aa17.02■□□□□ 0.32
MKS1-213ENST00000585134 PALD1Q9ULE6 856 aa17.02■□□□□ 0.32
MKS1-213ENST00000585134 SLC4A4Q9Y6R1 1079 aa17.02■□□□□ 0.32
MKS1-213ENST00000585134 SIPA1L1O43166 1804 aa17.01■□□□□ 0.31
MKS1-213ENST00000585134 GPAA1O43292 621 aa17.01■□□□□ 0.31
MKS1-213ENST00000585134 HLA-DOAP06340 250 aa17.01■□□□□ 0.31
MKS1-213ENST00000585134 VEGFBP49765 207 aa17.01■□□□□ 0.31
MKS1-213ENST00000585134 MKRN3Q13064 507 aaKnown RBP17.01■□□□□ 0.31
MKS1-213ENST00000585134 ZMYM1Q5SVZ6 1142 aa17.01■□□□□ 0.31
MKS1-213ENST00000585134 CCDC129Q6ZRS4 1044 aa17.01■□□□□ 0.31
MKS1-213ENST00000585134 RASAL3Q86YV0 1011 aa17.01■□□□□ 0.31
MKS1-213ENST00000585134 KLRG1Q96E93 195 aa17.01■□□□□ 0.31
MKS1-213ENST00000585134 A0A0D9SFI3 127 aa17■□□□□ 0.31
MKS1-213ENST00000585134 AOC2O75106 756 aa17■□□□□ 0.31
MKS1-213ENST00000585134 ECE1P42892 770 aa17■□□□□ 0.31
MKS1-213ENST00000585134 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
MKS1-213ENST00000585134 MAP3K11Q16584 847 aa17■□□□□ 0.31
MKS1-213ENST00000585134 CRACR2BQ8N4Y2 399 aaPredicted RBP17■□□□□ 0.31
MKS1-213ENST00000585134 FAM227BQ96M60 508 aa17■□□□□ 0.31
MKS1-213ENST00000585134 TRIM34Q9BYJ4 488 aa17■□□□□ 0.31
MKS1-213ENST00000585134 ELP3Q9H9T3 547 aa17■□□□□ 0.31
MKS1-213ENST00000585134 DIAPH3Q9NSV4 1193 aa17■□□□□ 0.31
MKS1-213ENST00000585134 MCM9Q9NXL9 1143 aa17■□□□□ 0.31
MKS1-213ENST00000585134 WDR33Q9C0J8 1336 aaKnown RBP16.99■□□□□ 0.31
MKS1-213ENST00000585134 POLR3DP05423 398 aaPredicted RBP16.99■□□□□ 0.31
MKS1-213ENST00000585134 CYP2D6P10635 497 aa16.99■□□□□ 0.31
MKS1-213ENST00000585134 SDSP20132 328 aa16.99■□□□□ 0.31
MKS1-213ENST00000585134 INPP5BP32019 993 aa16.99■□□□□ 0.31
MKS1-213ENST00000585134 LDLRAD1Q5T700 205 aa16.99■□□□□ 0.31
MKS1-213ENST00000585134 ANKRD13AQ8IZ07 590 aa16.99■□□□□ 0.31
MKS1-213ENST00000585134 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.99■□□□□ 0.31
MKS1-213ENST00000585134 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
MKS1-213ENST00000585134 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
MKS1-213ENST00000585134 DHX36Q9H2U1 1008 aaKnown RBP16.99■□□□□ 0.31
MKS1-213ENST00000585134 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.99■□□□□ 0.31
MKS1-213ENST00000585134 CSADQ9Y600 493 aa16.99■□□□□ 0.31
MKS1-213ENST00000585134 BAZ2AQ9UIF9 1905 aaKnown RBP16.99■□□□□ 0.31
MKS1-213ENST00000585134 SLC10A3P09131 477 aa16.98■□□□□ 0.31
MKS1-213ENST00000585134 MAP3K9P80192 1104 aa16.98■□□□□ 0.31
MKS1-213ENST00000585134 VGLL4Q14135 290 aa16.98■□□□□ 0.31
MKS1-213ENST00000585134 DNAJC5GQ8N7S2 189 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms