RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, human

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00473-205	ENST00000584911	APOBR	Q0VD83	1088 aa		13.74	□□□□□ -0.21
LINC00473-205	ENST00000584911	TTC31	Q49AM3	519 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC00473-205	ENST00000584911	AACS	Q86V21	672 aa		13.74	□□□□□ -0.21
LINC00473-205	ENST00000584911	UTP14A	Q9BVJ6	771 aa	Known RBP	13.74	□□□□□ -0.21
LINC00473-205	ENST00000584911	NDUFA8	P51970	172 aa		13.73	□□□□□ -0.21
LINC00473-205	ENST00000584911	DNAJC10	Q8IXB1	793 aa		13.73	□□□□□ -0.21
LINC00473-205	ENST00000584911	IL17RE	Q8NFR9	667 aa		13.73	□□□□□ -0.21
LINC00473-205	ENST00000584911	DNAAF4	Q8WXU2	420 aa		13.73	□□□□□ -0.21
LINC00473-205	ENST00000584911	GOLGA1	Q92805	767 aa		13.73	□□□□□ -0.21
LINC00473-205	ENST00000584911	NCAPG	Q9BPX3	1015 aa		13.73	□□□□□ -0.21
LINC00473-205	ENST00000584911	RTEL1	Q9NZ71	1219 aa		13.73	□□□□□ -0.21
LINC00473-205	ENST00000584911	SIPA1L3	O60292	1781 aa	Predicted RBP	13.73	□□□□□ -0.21
LINC00473-205	ENST00000584911	GOLGA6L9	A6NEM1	432 aa		13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	GNAT3	A8MTJ3	354 aa		13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	ARHGAP6	O43182	974 aa		13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	TAF7	Q15545	349 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	VSTM4	Q8IW00	320 aa		13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	GOLGB1	Q14789	3259 aa	Known RBP	13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	COL15A1	P39059	1388 aa		13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	SALL1	Q9NSC2	1324 aa		13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	KIAA1551	Q9HCM1	1747 aa		13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911		A0A1B0GVL5	298 aa		13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	CYP19A1	P11511	503 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	DPF2	Q92785	391 aa		13.72	□□□□□ -0.21
LINC00473-205	ENST00000584911	EIF3CL	B5ME19	914 aa	Known RBP	13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	CBFA2T2	O43439	604 aa		13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	ATP1A3	P13637	1013 aa		13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	USP5	P45974	858 aa		13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	CORO7	P57737	925 aa		13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	GNL2	Q13823	731 aa	Known RBP	13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	FOXR1	Q6PIV2	292 aa		13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	EAF2	Q96CJ1	260 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	EIF3C	Q99613	913 aa	Known RBP	13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	FSD1	Q9BTV5	496 aa		13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	CCDC87	Q9NVE4	849 aa		13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	RAB21	Q9UL25	225 aa		13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	PA2G4	Q9UQ80	394 aa	Known RBP	13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	CEMIP	Q8WUJ3	1361 aa		13.71	□□□□□ -0.21
LINC00473-205	ENST00000584911	PTPDC1	A2A3K4	754 aa		13.71	□□□□□ -0.22
LINC00473-205	ENST00000584911	HSP90B1	P14625	803 aa	Known RBP	13.71	□□□□□ -0.22
LINC00473-205	ENST00000584911	ATP2B1	P20020	1258 aa		13.71	□□□□□ -0.22
LINC00473-205	ENST00000584911	LMOD1	P29536	600 aa	Predicted RBP	13.71	□□□□□ -0.22
LINC00473-205	ENST00000584911	GNG11	P61952	73 aa		13.71	□□□□□ -0.22
LINC00473-205	ENST00000584911	ZRSR1	Q15695	479 aa	Known RBP	13.71	□□□□□ -0.22
LINC00473-205	ENST00000584911	MYCBP	Q99417	103 aa	Predicted RBP	13.71	□□□□□ -0.22
LINC00473-205	ENST00000584911	PDE11A	Q9HCR9	933 aa		13.71	□□□□□ -0.22
LINC00473-205	ENST00000584911	VPS18	Q9P253	973 aa		13.71	□□□□□ -0.22
LINC00473-205	ENST00000584911	MKRN1	Q9UHC7	482 aa	Known RBP	13.71	□□□□□ -0.22
LINC00473-205	ENST00000584911	C10orf71	Q711Q0	1435 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	PI4KAP2	A4QPH2	592 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	SASH1	O94885	1247 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	CP	P00450	1065 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	SLC3A2	P08195	630 aa	Known RBP	13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	UBASH3A	P57075	661 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	PI4KAP1	Q8N8J0	262 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	LINC00301	Q8NCQ3	95 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	FMNL2	Q96PY5	1086 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	LAMA4	Q16363	1823 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	LOC102724159	A0A0B4J2E5	919 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	TBX2	Q13207	712 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	PWP2	Q15269	919 aa	Known RBP	13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	HDX	Q7Z353	690 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	DHX58	Q96C10	678 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	ANKZF1	Q9H8Y5	726 aa		13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	SRP68	Q9UHB9	627 aa	Known RBP	13.7	□□□□□ -0.22
LINC00473-205	ENST00000584911	FOSB	P53539	338 aa		13.69	□□□□□ -0.22
LINC00473-205	ENST00000584911	TGFB2	P61812	414 aa		13.69	□□□□□ -0.22
LINC00473-205	ENST00000584911	GOLGA8F	Q08AF8	430 aa		13.69	□□□□□ -0.22
LINC00473-205	ENST00000584911	GOLGA8DP	Q0D2H9	430 aa		13.69	□□□□□ -0.22
LINC00473-205	ENST00000584911	SUGP1	Q8IWZ8	645 aa	Known RBP	13.69	□□□□□ -0.22
LINC00473-205	ENST00000584911	MSANTD4	Q8NCY6	345 aa		13.69	□□□□□ -0.22
LINC00473-205	ENST00000584911	PPM1E	Q8WY54	764 aa		13.69	□□□□□ -0.22
LINC00473-205	ENST00000584911	CHMP4C	Q96CF2	233 aa		13.69	□□□□□ -0.22
LINC00473-205	ENST00000584911	BIN1	O00499	593 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	MYO1B	O43795	1136 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	TEF	Q10587	303 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	FAM177A1	Q8N128	213 aa	Predicted RBP	13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	AGXT2	Q9BYV1	514 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	BOLA2	Q9H3K6	86 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	TLR7	Q9NYK1	1049 aa	Known RBP	13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	L1RE1	Q9UN81	338 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	CYP21A2	P08686	494 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	TOP1	P11387	765 aa	Known RBP	13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	PSEN1	P49768	467 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	ZNF790	Q6PG37	636 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	LRRC31	Q6UY01	552 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	SIL1	Q9H173	461 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	TUBE1	Q9UJT0	475 aa		13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911		U3KPZ7	1027 aa	Predicted RBP	13.68	□□□□□ -0.22
LINC00473-205	ENST00000584911	TMEM232	C9JQI7	657 aa		13.67	□□□□□ -0.22
LINC00473-205	ENST00000584911	POTEB2	H3BUK9	544 aa		13.67	□□□□□ -0.22
LINC00473-205	ENST00000584911	STX10	O60499	249 aa		13.67	□□□□□ -0.22
LINC00473-205	ENST00000584911	ZNF202	O95125	648 aa		13.67	□□□□□ -0.22
LINC00473-205	ENST00000584911	YEATS4	O95619	227 aa		13.67	□□□□□ -0.22
LINC00473-205	ENST00000584911	SRGAP1	Q7Z6B7	1085 aa		13.67	□□□□□ -0.22
LINC00473-205	ENST00000584911	TTC5	Q8N0Z6	440 aa		13.67	□□□□□ -0.22
LINC00473-205	ENST00000584911	KCNG4	Q8TDN1	519 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms