RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 FBXO33Q7Z6M2 555 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 FAM20CQ8IXL6 584 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 NSUN5Q96P11 429 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 MDFIQ99750 246 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 DMGDHQ9UI17 866 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 KIAA1024Q9UPX6 916 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 CDK11AQ9UQ88 783 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 CLTCQ00610 1675 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 LINC01387J3KSC0 135 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 SELPP16109 830 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 MAP4P27816 1152 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 CRTC2Q53ET0 693 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 ZNF746Q6NUN9 644 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 BEND4Q6ZU67 534 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 RAB44Q7Z6P3 723 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 COX4I2Q96KJ9 171 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 LACRTQ9GZZ8 138 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 SPATA31A6Q5VVP1 1343 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 TMEM265A0A087WTH1 108 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 C21orf2O43822 256 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 RLBP1P12271 317 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 RAC2P15153 192 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 PDE3AQ14432 1141 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 COX20Q5RI15 118 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 MCTP1Q6DN14 999 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 PPP1R1BQ9UD71 204 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 RNF114Q9Y508 228 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 USP3Q9Y6I4 520 aa2.82□□□□□ -1.96
SMCHD1-211ENST00000584897 ZNF518AQ6AHZ1 1483 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 FAM229AH3BQW9 127 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 CYP26A1O43174 497 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 GSTM4Q03013 218 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 NFIAQ12857 509 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 HFE2Q6ZVN8 426 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 ZSCAN18Q8TBC5 510 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 SRCIN1Q9C0H9 1055 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 QTRT2Q9H974 415 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 MARF1Q9Y4F3 1742 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 TIAM1Q13009 1591 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 WDR64B1ANS9 1081 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 CPNE3O75131 537 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 DZIP1LQ8IYY4 767 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 MYRFLQ96LU7 910 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 EHD4Q9H223 541 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 KRT82Q9NSB4 513 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 JCADQ9P266 1359 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 MROH1Q8NDA8 1641 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 PLEKHH2Q8IVE3 1493 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 OPLAHO14841 1288 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 THBS1P07996 1170 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 ENDOUP21128 410 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 MLECQ14165 292 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 XP32Q5T750 250 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 Q6ZS46 218 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 STK32AQ8WU08 396 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 C7orf43Q8WVR3 580 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 NUDT16Q96DE0 195 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 SUGCTQ9HAC7 445 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 SLC5A6Q9Y289 635 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 SNX11Q9Y5W9 270 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 KIDINS220Q9ULH0 1771 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 RGPD1P0DJD0 1748 aa2.81□□□□□ -1.96
SMCHD1-211ENST00000584897 CHD4Q14839 1912 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 RREB1Q92766 1687 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 CEP162Q5TB80 1403 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 COL22A1Q8NFW1 1626 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 GNAT3A8MTJ3 354 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 J3QW42 95 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 BMP3P12645 472 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 SLC7A3Q8WY07 619 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 OSMRQ99650 979 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 CLEC4MQ9H2X3 399 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 STAU1O95793 577 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 SSTR4P31391 388 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 TMEM164Q5U3C3 297 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 SND1Q7KZF4 910 aaKnown RBP eCLIP2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 TP53INP2Q8IXH6 220 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 ASAP3Q8TDY4 903 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 PCOLCE2Q9UKZ9 415 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 PDGFAP04085 211 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 PCDH1Q08174 1060 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 FLCNQ8NFG4 579 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 GOLGA2P5Q9HBQ8 144 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 ADGBQ8N7X0 1667 aa2.8□□□□□ -1.96
SMCHD1-211ENST00000584897 RALGAPBQ86X10 1494 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 NLRP1Q9C000 1473 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 LOC100996750A0A140TA64 210 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 ABL1P00519 1130 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 AFMP43652 599 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 FKBP5Q13451 457 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 KSR1Q8IVT5 923 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 FAM46AQ96IP4 442 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 MKNK2Q9HBH9 465 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 CLIP1P30622 1438 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 NCOA3Q9Y6Q9 1424 aa2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 NKTRP30414 1462 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 SCAF11Q99590 1463 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-211ENST00000584897 FARP2O94887 1054 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms