RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-223ENST00000584760 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
SREBF1-223ENST00000584760 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
SREBF1-223ENST00000584760 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.31■□□□□ 0.2
SREBF1-223ENST00000584760 FAM151AQ8WW52 585 aa16.31■□□□□ 0.2
SREBF1-223ENST00000584760 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
SREBF1-223ENST00000584760 MS4A4AQ96JQ5 239 aa16.31■□□□□ 0.2
SREBF1-223ENST00000584760 SNRKQ9NRH2 765 aa16.31■□□□□ 0.2
SREBF1-223ENST00000584760 ATRNL1Q5VV63 1379 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 GPR75-ASB3A0A0A6YYF3 556 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 MYCP01106 439 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-223ENST00000584760 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-223ENST00000584760 BTDP43251 543 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 FXR1P51114 621 aaKnown RBP eCLIP16.3■□□□□ 0.2
SREBF1-223ENST00000584760 RRP1P56182 461 aaKnown RBP16.3■□□□□ 0.2
SREBF1-223ENST00000584760 TCP10Q12799 353 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 VGLL4Q14135 290 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 TAF1CQ15572 869 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-223ENST00000584760 SLC4A8Q2Y0W8 1093 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 SLC9C1Q4G0N8 1177 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-223ENST00000584760 AACSQ86V21 672 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 KIF1BPQ96EK5 621 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 ZNF333Q96JL9 665 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 IDI2Q9BXS1 227 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 IL1RAPL2Q9NP60 686 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 PTCH2Q9Y6C5 1203 aa16.3■□□□□ 0.2
SREBF1-223ENST00000584760 DOCK1Q14185 1865 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 SIPA1L1O43166 1804 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 CCL15-CCL14A0A0B4J2E2 113 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 WDHD1O75717 1129 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-223ENST00000584760 RHBDL3P58872 404 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 ARHGEF6Q15052 776 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 CCL15Q16663 113 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 HOOK2Q96ED9 719 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 ZFYVE28Q9HCC9 887 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 RAI14Q9P0K7 980 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 LRP2BPQ9P2M1 347 aa16.29■□□□□ 0.2
SREBF1-223ENST00000584760 COLQQ9Y215 455 aaPredicted RBP16.29■□□□□ 0.2
SREBF1-223ENST00000584760 MYH7P12883 1935 aa16.28■□□□□ 0.2
SREBF1-223ENST00000584760 ENTPD3O75355 529 aa16.28■□□□□ 0.2
SREBF1-223ENST00000584760 ZAP70P43403 619 aa16.28■□□□□ 0.2
SREBF1-223ENST00000584760 RGS3P49796 1198 aa16.28■□□□□ 0.2
SREBF1-223ENST00000584760 GSTO1P78417 241 aa16.28■□□□□ 0.2
SREBF1-223ENST00000584760 DCAF15Q66K64 600 aa16.28■□□□□ 0.2
SREBF1-223ENST00000584760 ZFPM1Q8IX07 1006 aa16.28■□□□□ 0.2
SREBF1-223ENST00000584760 COL2A1P02458 1487 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-223ENST00000584760 ATAD5Q96QE3 1844 aa16.27■□□□□ 0.2
SREBF1-223ENST00000584760 APBB1O00213 710 aa16.27■□□□□ 0.2
SREBF1-223ENST00000584760 RAB11FIP3O75154 756 aa16.27■□□□□ 0.2
SREBF1-223ENST00000584760 GTF2A2P52657 109 aa16.27■□□□□ 0.2
SREBF1-223ENST00000584760 MAP3K9P80192 1104 aa16.27■□□□□ 0.2
SREBF1-223ENST00000584760 CLASRPQ8N2M8 674 aaKnown RBP16.27■□□□□ 0.2
SREBF1-223ENST00000584760 FAM43AQ8N2R8 423 aa16.27■□□□□ 0.2
SREBF1-223ENST00000584760 OTUD5Q96G74 571 aa16.27■□□□□ 0.2
SREBF1-223ENST00000584760 WRNIP1Q96S55 665 aa16.27■□□□□ 0.2
SREBF1-223ENST00000584760 DDX4Q9NQI0 724 aaKnown RBP16.27■□□□□ 0.2
SREBF1-223ENST00000584760 PIH1D3Q9NQM4 214 aaKnown RBP16.27■□□□□ 0.2
SREBF1-223ENST00000584760 SNCAIPQ9Y6H5 919 aa16.27■□□□□ 0.2
SREBF1-223ENST00000584760 PHIPQ8WWQ0 1821 aa16.26■□□□□ 0.19
SREBF1-223ENST00000584760 PTPRFP10586 1907 aa16.26■□□□□ 0.19
SREBF1-223ENST00000584760 IGSF3O75054 1194 aa16.26■□□□□ 0.19
SREBF1-223ENST00000584760 LDHCP07864 332 aa16.26■□□□□ 0.19
SREBF1-223ENST00000584760 NAA16Q6N069 864 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-223ENST00000584760 MIGA2Q7L4E1 593 aa16.26■□□□□ 0.19
SREBF1-223ENST00000584760 SH3BP5LQ7L8J4 393 aa16.26■□□□□ 0.19
SREBF1-223ENST00000584760 ZNF341Q9BYN7 854 aa16.26■□□□□ 0.19
SREBF1-223ENST00000584760 CSADQ9Y600 493 aa16.26■□□□□ 0.19
SREBF1-223ENST00000584760 HTTP42858 3142 aa16.26■□□□□ 0.19
SREBF1-223ENST00000584760 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
SREBF1-223ENST00000584760 SPDYE5A6NIY4 337 aa16.25■□□□□ 0.19
SREBF1-223ENST00000584760 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
SREBF1-223ENST00000584760 MAP4K4O95819 1239 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-223ENST00000584760 ADGRA1Q86SQ6 560 aa16.25■□□□□ 0.19
SREBF1-223ENST00000584760 SH3TC2Q8TF17 1288 aa16.25■□□□□ 0.19
SREBF1-223ENST00000584760 NDUFB9Q9Y6M9 179 aa16.25■□□□□ 0.19
SREBF1-223ENST00000584760 MYH1P12882 1939 aa16.25■□□□□ 0.19
SREBF1-223ENST00000584760 KIAA0100Q14667 2235 aaKnown RBP16.25■□□□□ 0.19
SREBF1-223ENST00000584760 H0YGN5 161 aa16.24■□□□□ 0.19
SREBF1-223ENST00000584760 ECM2O94769 699 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-223ENST00000584760 PICALMQ13492 652 aa16.24■□□□□ 0.19
SREBF1-223ENST00000584760 ZKSCAN4Q969J2 545 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-223ENST00000584760 ARHGAP39Q9C0H5 1083 aa16.24■□□□□ 0.19
SREBF1-223ENST00000584760 ANTXR1Q9H6X2 564 aa16.24■□□□□ 0.19
SREBF1-223ENST00000584760 ZNF112Q9UJU3 913 aa16.24■□□□□ 0.19
SREBF1-223ENST00000584760 RBBP6Q7Z6E9 1792 aaKnown RBP16.23■□□□□ 0.19
SREBF1-223ENST00000584760 NAV1Q8NEY1 1877 aa16.23■□□□□ 0.19
SREBF1-223ENST00000584760 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-223ENST00000584760 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
SREBF1-223ENST00000584760 INPP5BP32019 993 aa16.23■□□□□ 0.19
SREBF1-223ENST00000584760 KIF22Q14807 665 aa16.23■□□□□ 0.19
SREBF1-223ENST00000584760 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.23■□□□□ 0.19
SREBF1-223ENST00000584760 AATFQ9NY61 560 aaKnown RBP eCLIP16.23■□□□□ 0.19
SREBF1-223ENST00000584760 MKI67P46013 3256 aaKnown RBP16.22■□□□□ 0.19
SREBF1-223ENST00000584760 TLR2O60603 784 aa16.22■□□□□ 0.19
SREBF1-223ENST00000584760 IDH1O75874 414 aaKnown RBP16.22■□□□□ 0.19
SREBF1-223ENST00000584760 CETPP11597 493 aa16.22■□□□□ 0.19
SREBF1-223ENST00000584760 PPP4CP60510 307 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms